RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 LRRFIP2Q9Y608 721 aaKnown RBP12.41□□□□□ -0.42
TPM1-225ENST00000560679 SIPA1L1O43166 1804 aa12.4□□□□□ -0.42
TPM1-225ENST00000560679 COL6A1P12109 1028 aa12.4□□□□□ -0.42
TPM1-225ENST00000560679 PHKA1P46020 1223 aa12.4□□□□□ -0.42
TPM1-225ENST00000560679 ZSCAN29Q8IWY8 852 aaPredicted RBP12.4□□□□□ -0.42
TPM1-225ENST00000560679 LTBP2Q14767 1821 aa12.39□□□□□ -0.43
TPM1-225ENST00000560679 POTEB2H3BUK9 544 aa12.39□□□□□ -0.43
TPM1-225ENST00000560679 PEX10O60683 326 aa12.39□□□□□ -0.43
TPM1-225ENST00000560679 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
TPM1-225ENST00000560679 PICALMQ13492 652 aa12.39□□□□□ -0.43
TPM1-225ENST00000560679 ATP2B3Q16720 1220 aa12.39□□□□□ -0.43
TPM1-225ENST00000560679 LRRC26Q2I0M4 334 aa12.39□□□□□ -0.43
TPM1-225ENST00000560679 USP44Q9H0E7 712 aa12.39□□□□□ -0.43
TPM1-225ENST00000560679 ASCC2Q9H1I8 757 aaPredicted RBP12.39□□□□□ -0.43
TPM1-225ENST00000560679 BTDP43251 543 aa12.38□□□□□ -0.43
TPM1-225ENST00000560679 GCLCP48506 637 aaPredicted RBP12.38□□□□□ -0.43
TPM1-225ENST00000560679 HMGCS2P54868 508 aa12.38□□□□□ -0.43
TPM1-225ENST00000560679 MDM2Q00987 491 aaPredicted RBP12.38□□□□□ -0.43
TPM1-225ENST00000560679 RRP1BQ14684 758 aaKnown RBP12.38□□□□□ -0.43
TPM1-225ENST00000560679 MIER1Q8N108 512 aa12.38□□□□□ -0.43
TPM1-225ENST00000560679 ZNF384Q8TF68 577 aa12.38□□□□□ -0.43
TPM1-225ENST00000560679 MORF4L1Q9UBU8 362 aa12.38□□□□□ -0.43
TPM1-225ENST00000560679 TTC28Q96AY4 2481 aa12.37□□□□□ -0.43
TPM1-225ENST00000560679 SEMA3EO15041 775 aa12.37□□□□□ -0.43
TPM1-225ENST00000560679 ZBTB22O15209 634 aa12.37□□□□□ -0.43
TPM1-225ENST00000560679 CYP2B6P20813 491 aa12.37□□□□□ -0.43
TPM1-225ENST00000560679 ADORA1P30542 326 aa12.37□□□□□ -0.43
TPM1-225ENST00000560679 RHBDL3P58872 404 aa12.37□□□□□ -0.43
TPM1-225ENST00000560679 SPP2Q13103 211 aa12.37□□□□□ -0.43
TPM1-225ENST00000560679 RASGRF1Q13972 1273 aa12.37□□□□□ -0.43
TPM1-225ENST00000560679 LHX8Q68G74 356 aa12.37□□□□□ -0.43
TPM1-225ENST00000560679 FAM109BQ6ICB4 259 aaPredicted RBP12.37□□□□□ -0.43
TPM1-225ENST00000560679 MRPL50Q8N5N7 158 aaKnown RBP12.37□□□□□ -0.43
TPM1-225ENST00000560679 ZNF280CQ8ND82 737 aa12.37□□□□□ -0.43
TPM1-225ENST00000560679 FAM163AQ96GL9 167 aaPredicted RBP12.37□□□□□ -0.43
TPM1-225ENST00000560679 FAM161BQ96MY7 647 aa12.37□□□□□ -0.43
TPM1-225ENST00000560679 DENND2AQ9ULE3 1009 aa12.37□□□□□ -0.43
TPM1-225ENST00000560679 MROH7-TTC4A0A0A0MT08 1334 aa12.37□□□□□ -0.43
TPM1-225ENST00000560679 TBC1D12O60347 775 aa12.36□□□□□ -0.43
TPM1-225ENST00000560679 SH3D19Q5HYK7 790 aa12.36□□□□□ -0.43
TPM1-225ENST00000560679 DZIP1Q86YF9 867 aaKnown RBP12.36□□□□□ -0.43
TPM1-225ENST00000560679 OSBPL5Q9H0X9 879 aaPredicted RBP12.36□□□□□ -0.43
TPM1-225ENST00000560679 SIL1Q9H173 461 aa12.36□□□□□ -0.43
TPM1-225ENST00000560679 TXNRD2Q9NNW7 524 aa12.36□□□□□ -0.43
TPM1-225ENST00000560679 CCND3P30281 292 aaPredicted RBP12.35□□□□□ -0.43
TPM1-225ENST00000560679 CACNB2Q08289 660 aaPredicted RBP12.35□□□□□ -0.43
TPM1-225ENST00000560679 CCL14Q16627 93 aa12.35□□□□□ -0.43
TPM1-225ENST00000560679 CCDC102BQ68D86 513 aa12.35□□□□□ -0.43
TPM1-225ENST00000560679 USP6NLQ92738 828 aa12.35□□□□□ -0.43
TPM1-225ENST00000560679 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.35□□□□□ -0.43
TPM1-225ENST00000560679 GNL3LQ9NVN8 582 aaKnown RBP12.35□□□□□ -0.43
TPM1-225ENST00000560679 PDS5AQ29RF7 1337 aaKnown RBP12.35□□□□□ -0.43
TPM1-225ENST00000560679 GPR75-ASB3A0A0A6YYF3 556 aa12.34□□□□□ -0.43
TPM1-225ENST00000560679 CIAO1O76071 339 aa12.34□□□□□ -0.43
TPM1-225ENST00000560679 XRCC5P13010 732 aaKnown RBP12.34□□□□□ -0.43
TPM1-225ENST00000560679 ZKSCAN1P17029 563 aaPredicted RBP12.34□□□□□ -0.43
TPM1-225ENST00000560679 PABPC4Q13310 644 aaKnown RBP eCLIP12.34□□□□□ -0.43
TPM1-225ENST00000560679 SHROOM1Q2M3G4 852 aaPredicted RBP12.34□□□□□ -0.43
TPM1-225ENST00000560679 POTEEQ6S8J3 1075 aa12.34□□□□□ -0.43
TPM1-225ENST00000560679 ZGPATQ8N5A5 531 aaKnown RBP12.34□□□□□ -0.43
TPM1-225ENST00000560679 SOCS4Q8WXH5 440 aa12.34□□□□□ -0.43
TPM1-225ENST00000560679 ABCF2Q9UG63 623 aa12.34□□□□□ -0.43
TPM1-225ENST00000560679 PTPRCP08575 1304 aa12.34□□□□□ -0.43
TPM1-225ENST00000560679 NPM3O75607 178 aaKnown RBP12.33□□□□□ -0.44
TPM1-225ENST00000560679 CENPBP07199 599 aaPredicted RBP12.33□□□□□ -0.44
TPM1-225ENST00000560679 CAP2P40123 477 aa12.33□□□□□ -0.44
TPM1-225ENST00000560679 HERVK_113P62684 666 aa12.33□□□□□ -0.44
TPM1-225ENST00000560679 JAG1P78504 1218 aa12.33□□□□□ -0.44
TPM1-225ENST00000560679 MECOMQ03112 1051 aa12.33□□□□□ -0.44
TPM1-225ENST00000560679 MTMR2Q13614 643 aa12.33□□□□□ -0.44
TPM1-225ENST00000560679 P2RX7Q99572 595 aaKnown RBP12.33□□□□□ -0.44
TPM1-225ENST00000560679 NUDT12Q9BQG2 462 aa12.33□□□□□ -0.44
TPM1-225ENST00000560679 TBC1D2Q9BYX2 928 aa12.33□□□□□ -0.44
TPM1-225ENST00000560679 PORCNQ9H237 461 aa12.33□□□□□ -0.44
TPM1-225ENST00000560679 CEP126Q9P2H0 1117 aa12.33□□□□□ -0.44
TPM1-225ENST00000560679 FBXO3Q9UK99 471 aa12.33□□□□□ -0.44
TPM1-225ENST00000560679 PA2G4Q9UQ80 394 aaKnown RBP12.33□□□□□ -0.44
TPM1-225ENST00000560679 CDK5RAP2Q96SN8 1893 aa12.32□□□□□ -0.44
TPM1-225ENST00000560679 USP17L5A8MUK1 530 aa12.32□□□□□ -0.44
TPM1-225ENST00000560679 IRX3P78415 501 aaPredicted RBP12.32□□□□□ -0.44
TPM1-225ENST00000560679 MORN1Q5T089 497 aa12.32□□□□□ -0.44
TPM1-225ENST00000560679 CDX2Q99626 313 aaPredicted RBP12.32□□□□□ -0.44
TPM1-225ENST00000560679 PRDM6Q9NQX0 595 aa12.32□□□□□ -0.44
TPM1-225ENST00000560679 RBPJLQ9UBG7 517 aa12.32□□□□□ -0.44
TPM1-225ENST00000560679 ZNF521Q96K83 1311 aa12.32□□□□□ -0.44
TPM1-225ENST00000560679 FOCADQ5VW36 1801 aa12.32□□□□□ -0.44
TPM1-225ENST00000560679 RLFQ13129 1914 aa12.31□□□□□ -0.44
TPM1-225ENST00000560679 HOXA7P31268 230 aaPredicted RBP12.31□□□□□ -0.44
TPM1-225ENST00000560679 IL15P40933 162 aaPredicted RBP12.31□□□□□ -0.44
TPM1-225ENST00000560679 BACE1P56817 501 aa12.31□□□□□ -0.44
TPM1-225ENST00000560679 ERVK-9P63128 1117 aa12.31□□□□□ -0.44
TPM1-225ENST00000560679 ERVK-24P63145 666 aa12.31□□□□□ -0.44
TPM1-225ENST00000560679 Q3C1V9 767 aa12.31□□□□□ -0.44
TPM1-225ENST00000560679 ZNF697Q5TEC3 545 aa12.31□□□□□ -0.44
TPM1-225ENST00000560679 GPR142Q7Z601 462 aa12.31□□□□□ -0.44
TPM1-225ENST00000560679 SLF2Q8IX21 1173 aa12.31□□□□□ -0.44
TPM1-225ENST00000560679 TRMT44Q8IYL2 757 aaKnown RBP12.31□□□□□ -0.44
TPM1-225ENST00000560679 GPRC5AQ8NFJ5 357 aa12.31□□□□□ -0.44
TPM1-225ENST00000560679 MAFAQ8NHW3 353 aaPredicted RBP12.31□□□□□ -0.44
TPM1-225ENST00000560679 SSH1Q8WYL5 1049 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms