RNA–Protein interactions for RNA: ENST00000560273.2

TUBBP8-201, Transcript of tubulin beta class I pseudogene 8, humanhuman

BASIC

Gene TUBBP8, Length 1,232 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP8-201ENST00000560273 TDO2P48775 406 aa11.28□□□□□ -0.6
TUBBP8-201ENST00000560273 MAP3K9P80192 1104 aa11.28□□□□□ -0.6
TUBBP8-201ENST00000560273 MAP3K10Q02779 954 aa11.28□□□□□ -0.6
TUBBP8-201ENST00000560273 MAP3K11Q16584 847 aa11.28□□□□□ -0.6
TUBBP8-201ENST00000560273 SLC4A8Q2Y0W8 1093 aa11.28□□□□□ -0.6
TUBBP8-201ENST00000560273 COL13A1Q5TAT6 717 aaPredicted RBP11.28□□□□□ -0.6
TUBBP8-201ENST00000560273 PAXIP1Q6ZW49 1069 aaPredicted RBP11.28□□□□□ -0.6
TUBBP8-201ENST00000560273 ANKRD13AQ8IZ07 590 aa11.28□□□□□ -0.6
TUBBP8-201ENST00000560273 IFNL3Q8IZI9 196 aa11.28□□□□□ -0.6
TUBBP8-201ENST00000560273 HHIPL1Q96JK4 782 aa11.28□□□□□ -0.6
TUBBP8-201ENST00000560273 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.28□□□□□ -0.6
TUBBP8-201ENST00000560273 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.28□□□□□ -0.6
TUBBP8-201ENST00000560273 HERC5Q9UII4 1024 aaKnown RBP11.28□□□□□ -0.6
TUBBP8-201ENST00000560273 GTF3C3Q9Y5Q9 886 aa11.28□□□□□ -0.6
TUBBP8-201ENST00000560273 RASSF10A6NK89 507 aa11.27□□□□□ -0.61
TUBBP8-201ENST00000560273 PLCD1P51178 756 aa11.27□□□□□ -0.61
TUBBP8-201ENST00000560273 ZNF157P51786 506 aaPredicted RBP11.27□□□□□ -0.61
TUBBP8-201ENST00000560273 LDLRAD1Q5T700 205 aa11.27□□□□□ -0.61
TUBBP8-201ENST00000560273 RGMBQ6NW40 437 aa11.27□□□□□ -0.61
TUBBP8-201ENST00000560273 TNS4Q8IZW8 715 aa11.27□□□□□ -0.61
TUBBP8-201ENST00000560273 SLC10A4Q96EP9 437 aa11.27□□□□□ -0.61
TUBBP8-201ENST00000560273 WRNIP1Q96S55 665 aa11.27□□□□□ -0.61
TUBBP8-201ENST00000560273 ARPP21Q9UBL0 812 aaPredicted RBP11.27□□□□□ -0.61
TUBBP8-201ENST00000560273 SERPINB13Q9UIV8 391 aa11.27□□□□□ -0.61
TUBBP8-201ENST00000560273 CSADQ9Y600 493 aa11.27□□□□□ -0.61
TUBBP8-201ENST00000560273 CCDC171Q6TFL3 1326 aa11.27□□□□□ -0.61
TUBBP8-201ENST00000560273 MYH2Q9UKX2 1941 aa11.27□□□□□ -0.61
TUBBP8-201ENST00000560273 MINDY4BA8MYZ0 360 aa11.26□□□□□ -0.61
TUBBP8-201ENST00000560273 SLURP2P0DP57 97 aa11.26□□□□□ -0.61
TUBBP8-201ENST00000560273 ECE1P42892 770 aa11.26□□□□□ -0.61
TUBBP8-201ENST00000560273 GRM1Q13255 1194 aa11.26□□□□□ -0.61
TUBBP8-201ENST00000560273 C12orf60Q5U649 245 aa11.26□□□□□ -0.61
TUBBP8-201ENST00000560273 VPS53Q5VIR6 699 aa11.26□□□□□ -0.61
TUBBP8-201ENST00000560273 CTR9Q6PD62 1173 aa11.26□□□□□ -0.61
TUBBP8-201ENST00000560273 CASC1Q6TDU7 716 aa11.26□□□□□ -0.61
TUBBP8-201ENST00000560273 ZNF589Q86UQ0 364 aaPredicted RBP11.26□□□□□ -0.61
TUBBP8-201ENST00000560273 METTL16Q86W50 562 aaKnown RBP11.26□□□□□ -0.61
TUBBP8-201ENST00000560273 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.26□□□□□ -0.61
TUBBP8-201ENST00000560273 CCDC102AQ96A19 550 aa11.26□□□□□ -0.61
TUBBP8-201ENST00000560273 NAPBQ9H115 298 aa11.26□□□□□ -0.61
TUBBP8-201ENST00000560273 EHD4Q9H223 541 aa11.26□□□□□ -0.61
TUBBP8-201ENST00000560273 ZNF112Q9UJU3 913 aa11.26□□□□□ -0.61
TUBBP8-201ENST00000560273 MAST2Q6P0Q8 1798 aa11.26□□□□□ -0.61
TUBBP8-201ENST00000560273 COL2A1P02458 1487 aaPredicted RBP11.25□□□□□ -0.61
TUBBP8-201ENST00000560273 SSC5DA1L4H1 1573 aa11.25□□□□□ -0.61
TUBBP8-201ENST00000560273 CYP2D7A0A087X1C5 515 aa11.25□□□□□ -0.61
TUBBP8-201ENST00000560273 FAM196BA6NMK8 535 aa11.25□□□□□ -0.61
TUBBP8-201ENST00000560273 PHF20L1A8MW92 1017 aa11.25□□□□□ -0.61
TUBBP8-201ENST00000560273 CTNND1O60716 968 aaKnown RBP11.25□□□□□ -0.61
TUBBP8-201ENST00000560273 CYP2D6P10635 497 aa11.25□□□□□ -0.61
TUBBP8-201ENST00000560273 HSPD1P10809 573 aaKnown RBP11.25□□□□□ -0.61
TUBBP8-201ENST00000560273 INPP5BP32019 993 aa11.25□□□□□ -0.61
TUBBP8-201ENST00000560273 VGLL4Q14135 290 aa11.25□□□□□ -0.61
TUBBP8-201ENST00000560273 SBK1Q52WX2 424 aa11.25□□□□□ -0.61
TUBBP8-201ENST00000560273 CYP4F22Q6NT55 531 aa11.25□□□□□ -0.61
TUBBP8-201ENST00000560273 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.25□□□□□ -0.61
TUBBP8-201ENST00000560273 ZKSCAN4Q969J2 545 aaPredicted RBP11.25□□□□□ -0.61
TUBBP8-201ENST00000560273 EPB41L4AQ9HCS5 686 aaPredicted RBP11.25□□□□□ -0.61
TUBBP8-201ENST00000560273 RAD50Q92878 1312 aa11.25□□□□□ -0.61
TUBBP8-201ENST00000560273 DOCK2Q92608 1830 aa11.25□□□□□ -0.61
TUBBP8-201ENST00000560273 CDC45O75419 566 aa11.24□□□□□ -0.61
TUBBP8-201ENST00000560273 FGAP02671 866 aa11.24□□□□□ -0.61
TUBBP8-201ENST00000560273 SLC3A2P08195 630 aaKnown RBP11.24□□□□□ -0.61
TUBBP8-201ENST00000560273 ALX1Q15699 326 aa11.24□□□□□ -0.61
TUBBP8-201ENST00000560273 KIAA1211Q6ZU35 1233 aa11.24□□□□□ -0.61
TUBBP8-201ENST00000560273 CLMNQ96JQ2 1002 aa11.24□□□□□ -0.61
TUBBP8-201ENST00000560273 CAPNS2Q96L46 248 aa11.24□□□□□ -0.61
TUBBP8-201ENST00000560273 ELP3Q9H9T3 547 aa11.24□□□□□ -0.61
TUBBP8-201ENST00000560273 PICK1Q9NRD5 415 aa11.24□□□□□ -0.61
TUBBP8-201ENST00000560273 SWAP70Q9UH65 585 aa11.24□□□□□ -0.61
TUBBP8-201ENST00000560273 TAOK2Q9UL54 1235 aa11.24□□□□□ -0.61
TUBBP8-201ENST00000560273 SGSM2O43147 1006 aa11.23□□□□□ -0.61
TUBBP8-201ENST00000560273 CAP2P40123 477 aa11.23□□□□□ -0.61
TUBBP8-201ENST00000560273 VEGFBP49765 207 aa11.23□□□□□ -0.61
TUBBP8-201ENST00000560273 GABPAQ06546 454 aa11.23□□□□□ -0.61
TUBBP8-201ENST00000560273 CERKLQ49MI3 558 aaPredicted RBP11.23□□□□□ -0.61
TUBBP8-201ENST00000560273 NOL9Q5SY16 702 aaKnown RBP11.23□□□□□ -0.61
TUBBP8-201ENST00000560273 TATDN1Q6P1N9 297 aa11.23□□□□□ -0.61
TUBBP8-201ENST00000560273 SCYL3Q8IZE3 742 aa11.23□□□□□ -0.61
TUBBP8-201ENST00000560273 STK11IPQ8N1F8 1099 aa11.23□□□□□ -0.61
TUBBP8-201ENST00000560273 DYNLL2Q96FJ2 89 aa11.23□□□□□ -0.61
TUBBP8-201ENST00000560273 DSCC1Q9BVC3 393 aa11.23□□□□□ -0.61
TUBBP8-201ENST00000560273 DNAJC18Q9H819 358 aa11.23□□□□□ -0.61
TUBBP8-201ENST00000560273 MKNK2Q9HBH9 465 aa11.23□□□□□ -0.61
TUBBP8-201ENST00000560273 ZNF287Q9HBT7 754 aa11.23□□□□□ -0.61
TUBBP8-201ENST00000560273 FOXP2O15409 715 aa11.22□□□□□ -0.61
TUBBP8-201ENST00000560273 SLC10A3P09131 477 aa11.22□□□□□ -0.61
TUBBP8-201ENST00000560273 POLR2AP24928 1970 aaKnown RBP11.22□□□□□ -0.61
TUBBP8-201ENST00000560273 SHMT1P34896 483 aa11.22□□□□□ -0.61
TUBBP8-201ENST00000560273 CDK8P49336 464 aa11.22□□□□□ -0.61
TUBBP8-201ENST00000560273 EVX2Q03828 476 aa11.22□□□□□ -0.61
TUBBP8-201ENST00000560273 PPARAQ07869 468 aa11.22□□□□□ -0.61
TUBBP8-201ENST00000560273 NOGQ13253 232 aa11.22□□□□□ -0.61
TUBBP8-201ENST00000560273 ERO1BQ86YB8 467 aa11.22□□□□□ -0.61
TUBBP8-201ENST00000560273 RASAL3Q86YV0 1011 aa11.22□□□□□ -0.61
TUBBP8-201ENST00000560273 OPTNQ96CV9 577 aa11.22□□□□□ -0.61
TUBBP8-201ENST00000560273 ESYT1Q9BSJ8 1104 aa11.22□□□□□ -0.61
TUBBP8-201ENST00000560273 WDR33Q9C0J8 1336 aaKnown RBP11.22□□□□□ -0.61
TUBBP8-201ENST00000560273 IL25Q9H293 177 aa11.22□□□□□ -0.61
TUBBP8-201ENST00000560273 CABP5Q9NP86 173 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms