RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 HERC5Q9UII4 1024 aaKnown RBP24.96■■□□□ 1.59
CHRNA3-207ENST00000559941 NDUFB9Q9Y6M9 179 aa24.96■■□□□ 1.59
CHRNA3-207ENST00000559941 TNRC18O15417 2968 aaPredicted RBP24.96■■□□□ 1.59
CHRNA3-207ENST00000559941 ADGRA2Q96PE1 1338 aa24.95■■□□□ 1.58
CHRNA3-207ENST00000559941 RAB11FIP3O75154 756 aa24.95■■□□□ 1.58
CHRNA3-207ENST00000559941 LACTBP83111 547 aaPredicted RBP24.95■■□□□ 1.58
CHRNA3-207ENST00000559941 KIF22Q14807 665 aa24.95■■□□□ 1.58
CHRNA3-207ENST00000559941 C20orf194Q5TEA3 1177 aa24.95■■□□□ 1.58
CHRNA3-207ENST00000559941 TGFBRAP1Q8WUH2 860 aa24.95■■□□□ 1.58
CHRNA3-207ENST00000559941 ANTXR1Q9H6X2 564 aa24.95■■□□□ 1.58
CHRNA3-207ENST00000559941 PI4KBQ9UBF8 816 aa24.95■■□□□ 1.58
CHRNA3-207ENST00000559941 MYH1P12882 1939 aa24.94■■□□□ 1.58
CHRNA3-207ENST00000559941 FLT1P17948 1338 aa24.94■■□□□ 1.58
CHRNA3-207ENST00000559941 PDE4DIPQ5VU43 2346 aa24.94■■□□□ 1.58
CHRNA3-207ENST00000559941 APBB1O00213 710 aa24.94■■□□□ 1.58
CHRNA3-207ENST00000559941 DYNLL1P63167 89 aaKnown RBP24.94■■□□□ 1.58
CHRNA3-207ENST00000559941 TMED8Q6PL24 325 aaPredicted RBP24.94■■□□□ 1.58
CHRNA3-207ENST00000559941 MAPKAPK5Q8IW41 473 aa24.94■■□□□ 1.58
CHRNA3-207ENST00000559941 CAP2P40123 477 aa24.93■■□□□ 1.58
CHRNA3-207ENST00000559941 MAP3K12Q12852 859 aa24.93■■□□□ 1.58
CHRNA3-207ENST00000559941 MAGEB6Q8N7X4 407 aa24.93■■□□□ 1.58
CHRNA3-207ENST00000559941 PARK7Q99497 189 aaKnown RBP24.93■■□□□ 1.58
CHRNA3-207ENST00000559941 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.93■■□□□ 1.58
CHRNA3-207ENST00000559941 CPA4Q9UI42 421 aa24.93■■□□□ 1.58
CHRNA3-207ENST00000559941 KIAA0100Q14667 2235 aaKnown RBP24.92■■□□□ 1.58
CHRNA3-207ENST00000559941 RRP1BQ14684 758 aaKnown RBP24.92■■□□□ 1.58
CHRNA3-207ENST00000559941 GADL1Q6ZQY3 521 aa24.92■■□□□ 1.58
CHRNA3-207ENST00000559941 CCDC84Q86UT8 332 aaPredicted RBP24.92■■□□□ 1.58
CHRNA3-207ENST00000559941 CERS3Q8IU89 383 aa24.92■■□□□ 1.58
CHRNA3-207ENST00000559941 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.92■■□□□ 1.58
CHRNA3-207ENST00000559941 ARMC5Q96C12 935 aa24.92■■□□□ 1.58
CHRNA3-207ENST00000559941 ARHGAP39Q9C0H5 1083 aa24.92■■□□□ 1.58
CHRNA3-207ENST00000559941 SLC45A1Q9Y2W3 748 aa24.92■■□□□ 1.58
CHRNA3-207ENST00000559941 TRIM75PA6NK02 468 aa24.91■■□□□ 1.58
CHRNA3-207ENST00000559941 GNRH1P01148 92 aa24.91■■□□□ 1.58
CHRNA3-207ENST00000559941 METTL16Q86W50 562 aaKnown RBP24.91■■□□□ 1.58
CHRNA3-207ENST00000559941 FOXP4Q8IVH2 680 aaPredicted RBP24.91■■□□□ 1.58
CHRNA3-207ENST00000559941 PTCH2Q9Y6C5 1203 aa24.91■■□□□ 1.58
CHRNA3-207ENST00000559941 RBBP6Q7Z6E9 1792 aaKnown RBP24.9■■□□□ 1.58
CHRNA3-207ENST00000559941 IFIT2P09913 472 aaKnown RBP24.9■■□□□ 1.58
CHRNA3-207ENST00000559941 TTF1Q15361 905 aaPredicted RBP24.9■■□□□ 1.58
CHRNA3-207ENST00000559941 MIGA1Q8NAN2 632 aa24.9■■□□□ 1.58
CHRNA3-207ENST00000559941 TBC1D2Q9BYX2 928 aa24.9■■□□□ 1.58
CHRNA3-207ENST00000559941 PALD1Q9ULE6 856 aa24.9■■□□□ 1.58
CHRNA3-207ENST00000559941 MGAMO43451 1857 aa24.89■■□□□ 1.58
CHRNA3-207ENST00000559941 CYP2C8P10632 490 aa24.89■■□□□ 1.58
CHRNA3-207ENST00000559941 PRMT2P55345 433 aa24.89■■□□□ 1.58
CHRNA3-207ENST00000559941 CENPFP49454 3210 aa24.88■■□□□ 1.57
CHRNA3-207ENST00000559941 LOC285556D6RIA3 1793 aa24.88■■□□□ 1.57
CHRNA3-207ENST00000559941 USP17L5A8MUK1 530 aa24.88■■□□□ 1.57
CHRNA3-207ENST00000559941 BCRP11274 1271 aa24.88■■□□□ 1.57
CHRNA3-207ENST00000559941 CTGFP29279 349 aa24.88■■□□□ 1.57
CHRNA3-207ENST00000559941 ZNF280CQ8ND82 737 aa24.88■■□□□ 1.57
CHRNA3-207ENST00000559941 DNAJC18Q9H819 358 aa24.88■■□□□ 1.57
CHRNA3-207ENST00000559941 HLA-DOAP06340 250 aa24.87■■□□□ 1.57
CHRNA3-207ENST00000559941 PSMC4P43686 418 aa24.87■■□□□ 1.57
CHRNA3-207ENST00000559941 SPP2Q13103 211 aa24.87■■□□□ 1.57
CHRNA3-207ENST00000559941 PROCA1Q8NCQ7 364 aaPredicted RBP24.87■■□□□ 1.57
CHRNA3-207ENST00000559941 SAP30BPQ9UHR5 308 aaKnown RBP24.87■■□□□ 1.57
CHRNA3-207ENST00000559941 AGTPBP1Q9UPW5 1226 aa24.87■■□□□ 1.57
CHRNA3-207ENST00000559941 NBPF11Q86T75 865 aa24.86■■□□□ 1.57
CHRNA3-207ENST00000559941 CRACR2BQ8N4Y2 399 aaPredicted RBP24.86■■□□□ 1.57
CHRNA3-207ENST00000559941 TRIM47Q96LD4 638 aa24.86■■□□□ 1.57
CHRNA3-207ENST00000559941 TRIM34Q9BYJ4 488 aa24.86■■□□□ 1.57
CHRNA3-207ENST00000559941 AS3MTQ9HBK9 375 aa24.86■■□□□ 1.57
CHRNA3-207ENST00000559941 ASNSP08243 561 aa24.85■■□□□ 1.57
CHRNA3-207ENST00000559941 USP5P45974 858 aa24.85■■□□□ 1.57
CHRNA3-207ENST00000559941 SLC9C1Q4G0N8 1177 aa24.85■■□□□ 1.57
CHRNA3-207ENST00000559941 ZNF333Q96JL9 665 aa24.85■■□□□ 1.57
CHRNA3-207ENST00000559941 RIOK1Q9BRS2 568 aaKnown RBP24.85■■□□□ 1.57
CHRNA3-207ENST00000559941 BCL11AQ9H165 835 aa24.85■■□□□ 1.57
CHRNA3-207ENST00000559941 GINM1Q9NU53 330 aa24.85■■□□□ 1.57
CHRNA3-207ENST00000559941 GOLIM4O00461 696 aa24.84■■□□□ 1.57
CHRNA3-207ENST00000559941 ECM2O94769 699 aaPredicted RBP24.84■■□□□ 1.57
CHRNA3-207ENST00000559941 SH3D19Q5HYK7 790 aa24.84■■□□□ 1.57
CHRNA3-207ENST00000559941 TREML2Q5T2D2 321 aa24.84■■□□□ 1.57
CHRNA3-207ENST00000559941 SLC9C2Q5TAH2 1124 aa24.84■■□□□ 1.57
CHRNA3-207ENST00000559941 DNAJC2Q99543 621 aaKnown RBP24.84■■□□□ 1.57
CHRNA3-207ENST00000559941 WDR18Q9BV38 432 aa24.84■■□□□ 1.57
CHRNA3-207ENST00000559941 SRRDQ9UH36 339 aa24.84■■□□□ 1.57
CHRNA3-207ENST00000559941 POTEFA5A3E0 1075 aa24.83■■□□□ 1.57
CHRNA3-207ENST00000559941 FMNL1O95466 1100 aaPredicted RBP24.83■■□□□ 1.57
CHRNA3-207ENST00000559941 PDE6AP16499 860 aa24.83■■□□□ 1.57
CHRNA3-207ENST00000559941 ATP5JP18859 108 aa24.83■■□□□ 1.57
CHRNA3-207ENST00000559941 OSBPP22059 807 aa24.83■■□□□ 1.57
CHRNA3-207ENST00000559941 HOXD10P28358 340 aa24.83■■□□□ 1.57
CHRNA3-207ENST00000559941 JAG1P78504 1218 aa24.83■■□□□ 1.57
CHRNA3-207ENST00000559941 LRRCC1Q9C099 1032 aa24.83■■□□□ 1.57
CHRNA3-207ENST00000559941 MAGEB6P1A0A0J9YX57 407 aa24.82■■□□□ 1.56
CHRNA3-207ENST00000559941 HMGCS2P54868 508 aa24.82■■□□□ 1.56
CHRNA3-207ENST00000559941 SMCR8Q8TEV9 937 aaPredicted RBP24.82■■□□□ 1.56
CHRNA3-207ENST00000559941 PNMA3Q9UL41 463 aa24.82■■□□□ 1.56
CHRNA3-207ENST00000559941 MYH7P12883 1935 aa24.82■■□□□ 1.56
CHRNA3-207ENST00000559941 NAV1Q8NEY1 1877 aa24.81■■□□□ 1.56
CHRNA3-207ENST00000559941 DDX60LQ5H9U9 1706 aaKnown RBP24.81■■□□□ 1.56
CHRNA3-207ENST00000559941 GDF11O95390 407 aa24.81■■□□□ 1.56
CHRNA3-207ENST00000559941 FCGRTP55899 365 aa24.81■■□□□ 1.56
CHRNA3-207ENST00000559941 SLC4A8Q2Y0W8 1093 aa24.81■■□□□ 1.56
CHRNA3-207ENST00000559941 TTC6Q86TZ1 520 aa24.81■■□□□ 1.56
CHRNA3-207ENST00000559941 EDC3Q96F86 508 aaKnown RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms