RNA–Protein interactions for RNA: ENST00000559162.5

AP3S2-209, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 2

Gene AP3S2, Length 357 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-209ENST00000559162 PTCH2Q9Y6C5 1203 aa12.72□□□□□ -0.37
AP3S2-209ENST00000559162 CDK5RAP2Q96SN8 1893 aa12.72□□□□□ -0.37
AP3S2-209ENST00000559162 LOC285556D6RIA3 1793 aa12.71□□□□□ -0.37
AP3S2-209ENST00000559162 TRIM75PA6NK02 468 aa12.71□□□□□ -0.37
AP3S2-209ENST00000559162 IDH1O75874 414 aaKnown RBP12.71□□□□□ -0.37
AP3S2-209ENST00000559162 HOXD10P28358 340 aa12.71□□□□□ -0.37
AP3S2-209ENST00000559162 MAP3K12Q12852 859 aa12.71□□□□□ -0.37
AP3S2-209ENST00000559162 GPAT2Q6NUI2 795 aa12.71□□□□□ -0.37
AP3S2-209ENST00000559162 GADL1Q6ZQY3 521 aa12.71□□□□□ -0.37
AP3S2-209ENST00000559162 ADGRA1Q86SQ6 560 aa12.71□□□□□ -0.37
AP3S2-209ENST00000559162 CLASRPQ8N2M8 674 aaKnown RBP12.71□□□□□ -0.37
AP3S2-209ENST00000559162 RHPN1Q8TCX5 695 aa12.71□□□□□ -0.37
AP3S2-209ENST00000559162 KIF1BPQ96EK5 621 aa12.71□□□□□ -0.37
AP3S2-209ENST00000559162 ZNF333Q96JL9 665 aa12.71□□□□□ -0.37
AP3S2-209ENST00000559162 TRIM34Q9BYJ4 488 aa12.71□□□□□ -0.37
AP3S2-209ENST00000559162 AS3MTQ9HBK9 375 aa12.71□□□□□ -0.37
AP3S2-209ENST00000559162 COG6Q9Y2V7 657 aa12.71□□□□□ -0.37
AP3S2-209ENST00000559162 ZSWIM8A7E2V4 1837 aa12.71□□□□□ -0.38
AP3S2-209ENST00000559162 SIPA1L1O43166 1804 aa12.71□□□□□ -0.38
AP3S2-209ENST00000559162 MYO5AQ9Y4I1 1855 aaKnown RBP12.7□□□□□ -0.38
AP3S2-209ENST00000559162 FAM196BA6NMK8 535 aa12.7□□□□□ -0.38
AP3S2-209ENST00000559162 HLA-DOAP06340 250 aa12.7□□□□□ -0.38
AP3S2-209ENST00000559162 BCRP11274 1271 aa12.7□□□□□ -0.38
AP3S2-209ENST00000559162 CYP7A1P22680 504 aa12.7□□□□□ -0.38
AP3S2-209ENST00000559162 CAP2P40123 477 aa12.7□□□□□ -0.38
AP3S2-209ENST00000559162 TTF1Q15361 905 aaPredicted RBP12.7□□□□□ -0.38
AP3S2-209ENST00000559162 MAPKAPK5Q8IW41 473 aa12.7□□□□□ -0.38
AP3S2-209ENST00000559162 PROCA1Q8NCQ7 364 aaPredicted RBP12.7□□□□□ -0.38
AP3S2-209ENST00000559162 ZNF280CQ8ND82 737 aa12.7□□□□□ -0.38
AP3S2-209ENST00000559162 SMCR8Q8TEV9 937 aaPredicted RBP12.7□□□□□ -0.38
AP3S2-209ENST00000559162 TGFBRAP1Q8WUH2 860 aa12.7□□□□□ -0.38
AP3S2-209ENST00000559162 TMEM106CQ9BVX2 250 aa12.7□□□□□ -0.38
AP3S2-209ENST00000559162 ARHGAP39Q9C0H5 1083 aa12.7□□□□□ -0.38
AP3S2-209ENST00000559162 GINM1Q9NU53 330 aa12.7□□□□□ -0.38
AP3S2-209ENST00000559162 ZBTB40Q9NUA8 1239 aa12.7□□□□□ -0.38
AP3S2-209ENST00000559162 PNMA3Q9UL41 463 aa12.7□□□□□ -0.38
AP3S2-209ENST00000559162 AGTPBP1Q9UPW5 1226 aa12.7□□□□□ -0.38
AP3S2-209ENST00000559162 KIAA0100Q14667 2235 aaKnown RBP12.7□□□□□ -0.38
AP3S2-209ENST00000559162 USP17L5A8MUK1 530 aa12.69□□□□□ -0.38
AP3S2-209ENST00000559162 RAB11FIP3O75154 756 aa12.69□□□□□ -0.38
AP3S2-209ENST00000559162 ASNSP08243 561 aa12.69□□□□□ -0.38
AP3S2-209ENST00000559162 SLURP2P0DP57 97 aa12.69□□□□□ -0.38
AP3S2-209ENST00000559162 CYP2C8P10632 490 aa12.69□□□□□ -0.38
AP3S2-209ENST00000559162 PSMC4P43686 418 aa12.69□□□□□ -0.38
AP3S2-209ENST00000559162 FCGRTP55899 365 aa12.69□□□□□ -0.38
AP3S2-209ENST00000559162 PABPC4Q13310 644 aaKnown RBP eCLIP12.69□□□□□ -0.38
AP3S2-209ENST00000559162 PDE3AQ14432 1141 aa12.69□□□□□ -0.38
AP3S2-209ENST00000559162 PRPF38BQ5VTL8 546 aaKnown RBP12.69□□□□□ -0.38
AP3S2-209ENST00000559162 FOXP4Q8IVH2 680 aaPredicted RBP12.69□□□□□ -0.38
AP3S2-209ENST00000559162 CRACR2BQ8N4Y2 399 aaPredicted RBP12.69□□□□□ -0.38
AP3S2-209ENST00000559162 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.69□□□□□ -0.38
AP3S2-209ENST00000559162 IL1RAPL2Q9NP60 686 aa12.69□□□□□ -0.38
AP3S2-209ENST00000559162 SRRDQ9UH36 339 aa12.69□□□□□ -0.38
AP3S2-209ENST00000559162 MYPNQ86TC9 1320 aa12.68□□□□□ -0.38
AP3S2-209ENST00000559162 FMNL1O95466 1100 aaPredicted RBP12.68□□□□□ -0.38
AP3S2-209ENST00000559162 IFIT2P09913 472 aaKnown RBP12.68□□□□□ -0.38
AP3S2-209ENST00000559162 METTL16Q86W50 562 aaKnown RBP12.68□□□□□ -0.38
AP3S2-209ENST00000559162 MAGEB6Q8N7X4 407 aa12.68□□□□□ -0.38
AP3S2-209ENST00000559162 TRIM47Q96LD4 638 aa12.68□□□□□ -0.38
AP3S2-209ENST00000559162 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.68□□□□□ -0.38
AP3S2-209ENST00000559162 HTTP42858 3142 aa12.68□□□□□ -0.38
AP3S2-209ENST00000559162 POTEFA5A3E0 1075 aa12.67□□□□□ -0.38
AP3S2-209ENST00000559162 OSBPP22059 807 aa12.67□□□□□ -0.38
AP3S2-209ENST00000559162 SPP2Q13103 211 aa12.67□□□□□ -0.38
AP3S2-209ENST00000559162 SH3D19Q5HYK7 790 aa12.67□□□□□ -0.38
AP3S2-209ENST00000559162 CCDC84Q86UT8 332 aaPredicted RBP12.67□□□□□ -0.38
AP3S2-209ENST00000559162 MIGA1Q8NAN2 632 aa12.67□□□□□ -0.38
AP3S2-209ENST00000559162 RAET1EQ8TD07 263 aa12.67□□□□□ -0.38
AP3S2-209ENST00000559162 DNAJC18Q9H819 358 aa12.67□□□□□ -0.38
AP3S2-209ENST00000559162 PALD1Q9ULE6 856 aa12.67□□□□□ -0.38
AP3S2-209ENST00000559162 DDX60LQ5H9U9 1706 aaKnown RBP12.67□□□□□ -0.38
AP3S2-209ENST00000559162 MGAMO43451 1857 aa12.67□□□□□ -0.38
AP3S2-209ENST00000559162 MYH1P12882 1939 aa12.66□□□□□ -0.38
AP3S2-209ENST00000559162 CTGFP29279 349 aa12.66□□□□□ -0.38
AP3S2-209ENST00000559162 USP5P45974 858 aa12.66□□□□□ -0.38
AP3S2-209ENST00000559162 GCLCP48506 637 aaPredicted RBP12.66□□□□□ -0.38
AP3S2-209ENST00000559162 HMGCS2P54868 508 aa12.66□□□□□ -0.38
AP3S2-209ENST00000559162 DYNLL1P63167 89 aaKnown RBP12.66□□□□□ -0.38
AP3S2-209ENST00000559162 FAM110CQ1W6H9 321 aa12.66□□□□□ -0.38
AP3S2-209ENST00000559162 TREML2Q5T2D2 321 aa12.66□□□□□ -0.38
AP3S2-209ENST00000559162 SIRT2Q8IXJ6 389 aa12.66□□□□□ -0.38
AP3S2-209ENST00000559162 WDR18Q9BV38 432 aa12.66□□□□□ -0.38
AP3S2-209ENST00000559162 EHD4Q9H223 541 aa12.66□□□□□ -0.38
AP3S2-209ENST00000559162 ANTXR1Q9H6X2 564 aa12.66□□□□□ -0.38
AP3S2-209ENST00000559162 ZBTB21Q9ULJ3 1066 aa12.66□□□□□ -0.38
AP3S2-209ENST00000559162 NDUFB9Q9Y6M9 179 aa12.66□□□□□ -0.38
AP3S2-209ENST00000559162 NAV1Q8NEY1 1877 aa12.65□□□□□ -0.38
AP3S2-209ENST00000559162 APBB1O00213 710 aa12.65□□□□□ -0.38
AP3S2-209ENST00000559162 GRK4P32298 578 aa12.65□□□□□ -0.38
AP3S2-209ENST00000559162 BACE1P56817 501 aa12.65□□□□□ -0.38
AP3S2-209ENST00000559162 RRP1BQ14684 758 aaKnown RBP12.65□□□□□ -0.38
AP3S2-209ENST00000559162 SLC4A8Q2Y0W8 1093 aa12.65□□□□□ -0.38
AP3S2-209ENST00000559162 TTC6Q86TZ1 520 aa12.65□□□□□ -0.38
AP3S2-209ENST00000559162 SLAIN1Q8ND83 568 aa12.65□□□□□ -0.38
AP3S2-209ENST00000559162 SH3TC2Q8TF17 1288 aa12.65□□□□□ -0.38
AP3S2-209ENST00000559162 TMOD4Q9NZQ9 345 aa12.65□□□□□ -0.38
AP3S2-209ENST00000559162 SAP30BPQ9UHR5 308 aaKnown RBP12.65□□□□□ -0.38
AP3S2-209ENST00000559162 MAGEB6P1A0A0J9YX57 407 aa12.64□□□□□ -0.39
AP3S2-209ENST00000559162 C19orf81C9J6K1 198 aa12.64□□□□□ -0.39
AP3S2-209ENST00000559162 TNPO2O14787 897 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms