RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 FAM89AQ96GI7 184 aa7.12□□□□□ -1.27
LRRC28-208ENST00000558771 TSEN34Q9BSV6 310 aaKnown RBP7.12□□□□□ -1.27
LRRC28-208ENST00000558771 ZC3H12CQ9C0D7 883 aaKnown RBP7.12□□□□□ -1.27
LRRC28-208ENST00000558771 R3HDMLQ9H3Y0 253 aa7.12□□□□□ -1.27
LRRC28-208ENST00000558771 ZNF609O15014 1411 aa7.11□□□□□ -1.27
LRRC28-208ENST00000558771 PSME4Q14997 1843 aa7.11□□□□□ -1.27
LRRC28-208ENST00000558771 FKTNO75072 461 aa7.11□□□□□ -1.27
LRRC28-208ENST00000558771 UFL1O94874 794 aa7.11□□□□□ -1.27
LRRC28-208ENST00000558771 BMP2P12643 396 aa7.11□□□□□ -1.27
LRRC28-208ENST00000558771 ADD1P35611 737 aaKnown RBP7.11□□□□□ -1.27
LRRC28-208ENST00000558771 RPS8P62241 208 aaKnown RBP7.11□□□□□ -1.27
LRRC28-208ENST00000558771 FLIIQ13045 1269 aa7.11□□□□□ -1.27
LRRC28-208ENST00000558771 RNF20Q5VTR2 975 aa7.11□□□□□ -1.27
LRRC28-208ENST00000558771 GMLQ99445 158 aa7.11□□□□□ -1.27
LRRC28-208ENST00000558771 ISCA1Q9BUE6 129 aa7.11□□□□□ -1.27
LRRC28-208ENST00000558771 CFHR5Q9BXR6 569 aa7.11□□□□□ -1.27
LRRC28-208ENST00000558771 MYOZ2Q9NPC6 264 aa7.11□□□□□ -1.27
LRRC28-208ENST00000558771 PODXL2Q9NZ53 605 aa7.11□□□□□ -1.27
LRRC28-208ENST00000558771 SZT2Q5T011 3432 aa7.11□□□□□ -1.27
LRRC28-208ENST00000558771 MAPK8IP3Q9UPT6 1336 aa7.1□□□□□ -1.27
LRRC28-208ENST00000558771 ATP5J2-PTCD1G3V325 749 aa7.1□□□□□ -1.27
LRRC28-208ENST00000558771 LILRA1O75019 489 aa7.1□□□□□ -1.27
LRRC28-208ENST00000558771 FXR1P51114 621 aaKnown RBP eCLIP7.1□□□□□ -1.27
LRRC28-208ENST00000558771 VAC14Q08AM6 782 aa7.1□□□□□ -1.27
LRRC28-208ENST00000558771 SREBF2Q12772 1141 aa7.1□□□□□ -1.27
LRRC28-208ENST00000558771 NBPF9Q3BBW0 867 aa7.1□□□□□ -1.27
LRRC28-208ENST00000558771 CCER1Q8TC90 406 aaPredicted RBP7.1□□□□□ -1.27
LRRC28-208ENST00000558771 SEC31BQ9NQW1 1179 aa7.1□□□□□ -1.27
LRRC28-208ENST00000558771 CEP126Q9P2H0 1117 aa7.1□□□□□ -1.27
LRRC28-208ENST00000558771 GGA1Q9UJY5 639 aa7.1□□□□□ -1.27
LRRC28-208ENST00000558771 COG6Q9Y2V7 657 aa7.1□□□□□ -1.27
LRRC28-208ENST00000558771 KIAA0100Q14667 2235 aaKnown RBP7.09□□□□□ -1.27
LRRC28-208ENST00000558771 IRS4O14654 1257 aaPredicted RBP7.09□□□□□ -1.27
LRRC28-208ENST00000558771 RIPK4P57078 832 aa7.09□□□□□ -1.27
LRRC28-208ENST00000558771 PTPN12Q05209 780 aaKnown RBP7.09□□□□□ -1.27
LRRC28-208ENST00000558771 KRT24Q2M2I5 525 aa7.09□□□□□ -1.27
LRRC28-208ENST00000558771 INTS3Q68E01 1043 aaKnown RBP7.09□□□□□ -1.27
LRRC28-208ENST00000558771 PLBD2Q8NHP8 589 aa7.09□□□□□ -1.27
LRRC28-208ENST00000558771 AGBL1Q96MI9 1066 aa7.09□□□□□ -1.27
LRRC28-208ENST00000558771 BABAM1Q9NWV8 329 aa7.09□□□□□ -1.27
LRRC28-208ENST00000558771 CHPF2Q9P2E5 772 aa7.09□□□□□ -1.27
LRRC28-208ENST00000558771 ANKIB1Q9P2G1 1089 aa7.09□□□□□ -1.27
LRRC28-208ENST00000558771 TRIM17Q9Y577 477 aa7.09□□□□□ -1.27
LRRC28-208ENST00000558771 USP17L3A6NCW0 530 aa7.08□□□□□ -1.28
LRRC28-208ENST00000558771 USP17L4A6NCW7 530 aa7.08□□□□□ -1.28
LRRC28-208ENST00000558771 WNT10BO00744 389 aa7.08□□□□□ -1.28
LRRC28-208ENST00000558771 NF2P35240 595 aa7.08□□□□□ -1.28
LRRC28-208ENST00000558771 PRKG1Q13976 671 aa7.08□□□□□ -1.28
LRRC28-208ENST00000558771 OTOP1Q7RTM1 612 aa7.08□□□□□ -1.28
LRRC28-208ENST00000558771 USP17L1Q7RTZ2 530 aa7.08□□□□□ -1.28
LRRC28-208ENST00000558771 PODNQ7Z5L7 613 aa7.08□□□□□ -1.28
LRRC28-208ENST00000558771 MXD3Q9BW11 206 aa7.08□□□□□ -1.28
LRRC28-208ENST00000558771 PNNQ9H307 717 aaKnown RBP7.08□□□□□ -1.28
LRRC28-208ENST00000558771 CYLDQ9NQC7 956 aa7.08□□□□□ -1.28
LRRC28-208ENST00000558771 RBBP6Q7Z6E9 1792 aaKnown RBP7.08□□□□□ -1.28
LRRC28-208ENST00000558771 ZNF646O15015 1829 aaPredicted RBP7.07□□□□□ -1.28
LRRC28-208ENST00000558771 SOBPA7XYQ1 873 aa7.07□□□□□ -1.28
LRRC28-208ENST00000558771 SPINT1O43278 529 aa7.07□□□□□ -1.28
LRRC28-208ENST00000558771 EN2P19622 333 aaPredicted RBP7.07□□□□□ -1.28
LRRC28-208ENST00000558771 RELBQ01201 579 aa7.07□□□□□ -1.28
LRRC28-208ENST00000558771 TRIM28Q13263 835 aaKnown RBP7.07□□□□□ -1.28
LRRC28-208ENST00000558771 LDLRAD1Q5T700 205 aa7.07□□□□□ -1.28
LRRC28-208ENST00000558771 HDGFL1Q5TGJ6 251 aa7.07□□□□□ -1.28
LRRC28-208ENST00000558771 ARMC9Q7Z3E5 817 aa7.07□□□□□ -1.28
LRRC28-208ENST00000558771 ZBTB38Q8NAP3 1195 aaPredicted RBP7.07□□□□□ -1.28
LRRC28-208ENST00000558771 POM121Q96HA1 1249 aa7.07□□□□□ -1.28
LRRC28-208ENST00000558771 CCDC85AQ96PX6 553 aaPredicted RBP7.07□□□□□ -1.28
LRRC28-208ENST00000558771 FZD1Q9UP38 647 aa7.07□□□□□ -1.28
LRRC28-208ENST00000558771 XDHP47989 1333 aa7.06□□□□□ -1.28
LRRC28-208ENST00000558771 MANSC4A6NHS7 340 aaPredicted RBP7.06□□□□□ -1.28
LRRC28-208ENST00000558771 WTIPA6NIX2 430 aaPredicted RBP7.06□□□□□ -1.28
LRRC28-208ENST00000558771 IGF2BP3O00425 579 aaKnown RBP eCLIP7.06□□□□□ -1.28
LRRC28-208ENST00000558771 TERTO14746 1132 aaKnown RBP7.06□□□□□ -1.28
LRRC28-208ENST00000558771 RAD21O60216 631 aa7.06□□□□□ -1.28
LRRC28-208ENST00000558771 MAN1A2O60476 641 aa7.06□□□□□ -1.28
LRRC28-208ENST00000558771 SASH1O94885 1247 aa7.06□□□□□ -1.28
LRRC28-208ENST00000558771 ADH1AP07327 375 aa7.06□□□□□ -1.28
LRRC28-208ENST00000558771 ATP2B4P23634 1241 aa7.06□□□□□ -1.28
LRRC28-208ENST00000558771 TMPOP42166 694 aaKnown RBP7.06□□□□□ -1.28
LRRC28-208ENST00000558771 CCDC152Q4G0S7 254 aa7.06□□□□□ -1.28
LRRC28-208ENST00000558771 DACT2Q5SW24 774 aa7.06□□□□□ -1.28
LRRC28-208ENST00000558771 TREML4Q6UXN2 200 aa7.06□□□□□ -1.28
LRRC28-208ENST00000558771 KDF1Q8NAX2 398 aaPredicted RBP7.06□□□□□ -1.28
LRRC28-208ENST00000558771 CD99L2Q8TCZ2 262 aa7.06□□□□□ -1.28
LRRC28-208ENST00000558771 ARMC5Q96C12 935 aa7.06□□□□□ -1.28
LRRC28-208ENST00000558771 ZNF395Q9H8N7 513 aaPredicted RBP7.06□□□□□ -1.28
LRRC28-208ENST00000558771 DBF4Q9UBU7 674 aaPredicted RBP7.06□□□□□ -1.28
LRRC28-208ENST00000558771 ANGEL1Q9UNK9 670 aaKnown RBP7.06□□□□□ -1.28
LRRC28-208ENST00000558771 PTPN22Q9Y2R2 807 aa7.06□□□□□ -1.28
LRRC28-208ENST00000558771 CEP290O15078 2479 aa7.06□□□□□ -1.28
LRRC28-208ENST00000558771 TRIOBPQ9H2D6 2365 aa7.05□□□□□ -1.28
LRRC28-208ENST00000558771 RANBP2P49792 3224 aaKnown RBP7.05□□□□□ -1.28
LRRC28-208ENST00000558771 TTLL8A6PVC2 850 aa7.05□□□□□ -1.28
LRRC28-208ENST00000558771 CHL1O00533 1208 aa7.05□□□□□ -1.28
LRRC28-208ENST00000558771 PDE8AO60658 829 aa7.05□□□□□ -1.28
LRRC28-208ENST00000558771 HSP90B1P14625 803 aaKnown RBP7.05□□□□□ -1.28
LRRC28-208ENST00000558771 PTGIRP43119 386 aa7.05□□□□□ -1.28
LRRC28-208ENST00000558771 INHBEP58166 350 aa7.05□□□□□ -1.28
LRRC28-208ENST00000558771 ERVK-9P63128 1117 aa7.05□□□□□ -1.28
LRRC28-208ENST00000558771 CAP1Q01518 475 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms