RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 BTDP43251 543 aa9.92□□□□□ -0.82
TRAF3-205ENST00000558700 RGS3P49796 1198 aa9.92□□□□□ -0.82
TRAF3-205ENST00000558700 TIMM10P62072 90 aa9.92□□□□□ -0.82
TRAF3-205ENST00000558700 GSTO1P78417 241 aa9.92□□□□□ -0.82
TRAF3-205ENST00000558700 OS9Q13438 667 aaPredicted RBP9.92□□□□□ -0.82
TRAF3-205ENST00000558700 NOL9Q5SY16 702 aaKnown RBP9.92□□□□□ -0.82
TRAF3-205ENST00000558700 MIGA2Q7L4E1 593 aa9.92□□□□□ -0.82
TRAF3-205ENST00000558700 FAM43AQ8N2R8 423 aa9.92□□□□□ -0.82
TRAF3-205ENST00000558700 NEUROD6Q96NK8 337 aa9.92□□□□□ -0.82
TRAF3-205ENST00000558700 EFCC1Q9HA90 598 aa9.92□□□□□ -0.82
TRAF3-205ENST00000558700 FAM198AQ9UFP1 575 aa9.92□□□□□ -0.82
TRAF3-205ENST00000558700 ZNF112Q9UJU3 913 aa9.92□□□□□ -0.82
TRAF3-205ENST00000558700 BOLA1Q9Y3E2 137 aa9.92□□□□□ -0.82
TRAF3-205ENST00000558700 ZSWIM8A7E2V4 1837 aa9.91□□□□□ -0.82
TRAF3-205ENST00000558700 FOCADQ5VW36 1801 aa9.91□□□□□ -0.82
TRAF3-205ENST00000558700 C2orf72A6NCS6 295 aa9.91□□□□□ -0.82
TRAF3-205ENST00000558700 C19orf67A6NJJ6 358 aa9.91□□□□□ -0.82
TRAF3-205ENST00000558700 UQCRFS1P1P0C7P4 283 aa9.91□□□□□ -0.82
TRAF3-205ENST00000558700 ITPRIPQ8IWB1 547 aa9.91□□□□□ -0.82
TRAF3-205ENST00000558700 ZSCAN29Q8IWY8 852 aaPredicted RBP9.91□□□□□ -0.82
TRAF3-205ENST00000558700 SPATA5Q8NB90 893 aa9.91□□□□□ -0.82
TRAF3-205ENST00000558700 FAM163AQ96GL9 167 aaPredicted RBP9.91□□□□□ -0.82
TRAF3-205ENST00000558700 GPR108Q9NPR9 543 aa9.91□□□□□ -0.82
TRAF3-205ENST00000558700 CDK5RAP2Q96SN8 1893 aa9.91□□□□□ -0.82
TRAF3-205ENST00000558700 PHIPQ8WWQ0 1821 aa9.91□□□□□ -0.82
TRAF3-205ENST00000558700 BTBD19C9JJ37 291 aa9.9□□□□□ -0.82
TRAF3-205ENST00000558700 TBC1D12O60347 775 aa9.9□□□□□ -0.82
TRAF3-205ENST00000558700 TLR2O60603 784 aa9.9□□□□□ -0.82
TRAF3-205ENST00000558700 MAP4K4O95819 1239 aaPredicted RBP9.9□□□□□ -0.82
TRAF3-205ENST00000558700 LDHCP07864 332 aa9.9□□□□□ -0.82
TRAF3-205ENST00000558700 MECOMQ03112 1051 aa9.9□□□□□ -0.82
TRAF3-205ENST00000558700 PICALMQ13492 652 aa9.9□□□□□ -0.82
TRAF3-205ENST00000558700 KIF22Q14807 665 aa9.9□□□□□ -0.82
TRAF3-205ENST00000558700 ANKRD23Q86SG2 305 aa9.9□□□□□ -0.82
TRAF3-205ENST00000558700 PARP9Q8IXQ6 854 aa9.9□□□□□ -0.82
TRAF3-205ENST00000558700 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.9□□□□□ -0.82
TRAF3-205ENST00000558700 NOL10Q9BSC4 688 aaKnown RBP9.9□□□□□ -0.82
TRAF3-205ENST00000558700 HMG20BQ9P0W2 317 aa9.9□□□□□ -0.82
TRAF3-205ENST00000558700 KCNH4Q9UQ05 1017 aa9.9□□□□□ -0.82
TRAF3-205ENST00000558700 PTPN22Q9Y2R2 807 aa9.9□□□□□ -0.82
TRAF3-205ENST00000558700 LOC285556D6RIA3 1793 aa9.9□□□□□ -0.82
TRAF3-205ENST00000558700 TNRC18O15417 2968 aaPredicted RBP9.9□□□□□ -0.83
TRAF3-205ENST00000558700 GPR75-ASB3A0A0A6YYF3 556 aa9.89□□□□□ -0.83
TRAF3-205ENST00000558700 MCAMP43121 646 aa9.89□□□□□ -0.83
TRAF3-205ENST00000558700 TNNI3KQ59H18 835 aa9.89□□□□□ -0.83
TRAF3-205ENST00000558700 TTC39AQ5SRH9 613 aa9.89□□□□□ -0.83
TRAF3-205ENST00000558700 PI16Q6UXB8 463 aa9.89□□□□□ -0.83
TRAF3-205ENST00000558700 SCYL3Q8IZE3 742 aa9.89□□□□□ -0.83
TRAF3-205ENST00000558700 SSH3Q8TE77 659 aa9.89□□□□□ -0.83
TRAF3-205ENST00000558700 PARK7Q99497 189 aaKnown RBP9.89□□□□□ -0.83
TRAF3-205ENST00000558700 DDX4Q9NQI0 724 aaKnown RBP9.89□□□□□ -0.83
TRAF3-205ENST00000558700 PICK1Q9NRD5 415 aa9.89□□□□□ -0.83
TRAF3-205ENST00000558700 RAI14Q9P0K7 980 aa9.89□□□□□ -0.83
TRAF3-205ENST00000558700 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.89□□□□□ -0.83
TRAF3-205ENST00000558700 FPGT-TNNI3KV9GXZ4 949 aa9.89□□□□□ -0.83
TRAF3-205ENST00000558700 HTTP42858 3142 aa9.89□□□□□ -0.83
TRAF3-205ENST00000558700 MGAMO43451 1857 aa9.88□□□□□ -0.83
TRAF3-205ENST00000558700 MYO5AQ9Y4I1 1855 aaKnown RBP9.88□□□□□ -0.83
TRAF3-205ENST00000558700 CXCL11O14625 94 aa9.88□□□□□ -0.83
TRAF3-205ENST00000558700 IGSF3O75054 1194 aa9.88□□□□□ -0.83
TRAF3-205ENST00000558700 GNRH1P01148 92 aa9.88□□□□□ -0.83
TRAF3-205ENST00000558700 OSBPP22059 807 aa9.88□□□□□ -0.83
TRAF3-205ENST00000558700 RHBDL3P58872 404 aa9.88□□□□□ -0.83
TRAF3-205ENST00000558700 LACTBP83111 547 aaPredicted RBP9.88□□□□□ -0.83
TRAF3-205ENST00000558700 SLC9C1Q4G0N8 1177 aa9.88□□□□□ -0.83
TRAF3-205ENST00000558700 CCDC158Q5M9N0 1113 aa9.88□□□□□ -0.83
TRAF3-205ENST00000558700 ZFPM1Q8IX07 1006 aa9.88□□□□□ -0.83
TRAF3-205ENST00000558700 ARMC5Q96C12 935 aa9.88□□□□□ -0.83
TRAF3-205ENST00000558700 NSUN4Q96CB9 384 aaKnown RBP9.88□□□□□ -0.83
TRAF3-205ENST00000558700 OCEL1Q9H607 264 aa9.88□□□□□ -0.83
TRAF3-205ENST00000558700 C1orf115Q9H7X2 142 aa9.88□□□□□ -0.83
TRAF3-205ENST00000558700 GOPCQ9HD26 462 aa9.88□□□□□ -0.83
TRAF3-205ENST00000558700 LRP2BPQ9P2M1 347 aa9.88□□□□□ -0.83
TRAF3-205ENST00000558700 SIPA1L1O43166 1804 aa9.88□□□□□ -0.83
TRAF3-205ENST00000558700 ADGRA2Q96PE1 1338 aa9.87□□□□□ -0.83
TRAF3-205ENST00000558700 DDTLA6NHG4 134 aaPredicted RBP9.87□□□□□ -0.83
TRAF3-205ENST00000558700 PHF20L1A8MW92 1017 aa9.87□□□□□ -0.83
TRAF3-205ENST00000558700 PDHXO00330 501 aa9.87□□□□□ -0.83
TRAF3-205ENST00000558700 SURF6O75683 361 aaKnown RBP9.87□□□□□ -0.83
TRAF3-205ENST00000558700 RLBP1P12271 317 aa9.87□□□□□ -0.83
TRAF3-205ENST00000558700 PLCG2P16885 1265 aa9.87□□□□□ -0.83
TRAF3-205ENST00000558700 CLCN6P51797 869 aa9.87□□□□□ -0.83
TRAF3-205ENST00000558700 PRMT2P55345 433 aa9.87□□□□□ -0.83
TRAF3-205ENST00000558700 ATP8B2P98198 1209 aa9.87□□□□□ -0.83
TRAF3-205ENST00000558700 PRPF38BQ5VTL8 546 aaKnown RBP9.87□□□□□ -0.83
TRAF3-205ENST00000558700 SH3BP5LQ7L8J4 393 aa9.87□□□□□ -0.83
TRAF3-205ENST00000558700 FASTKD5Q7L8L6 764 aaKnown RBP9.87□□□□□ -0.83
TRAF3-205ENST00000558700 PDCD7Q8N8D1 485 aaKnown RBP9.87□□□□□ -0.83
TRAF3-205ENST00000558700 ZNF384Q8TF68 577 aa9.87□□□□□ -0.83
TRAF3-205ENST00000558700 ARID3AQ99856 593 aa9.87□□□□□ -0.83
TRAF3-205ENST00000558700 DBNDD2Q9BQY9 259 aa9.87□□□□□ -0.83
TRAF3-205ENST00000558700 TMEM121BQ9BXQ6 578 aaPredicted RBP9.87□□□□□ -0.83
TRAF3-205ENST00000558700 OSBPL5Q9H0X9 879 aaPredicted RBP9.87□□□□□ -0.83
TRAF3-205ENST00000558700 NOP58Q9Y2X3 529 aaKnown RBP9.87□□□□□ -0.83
TRAF3-205ENST00000558700 PTCH2Q9Y6C5 1203 aa9.87□□□□□ -0.83
TRAF3-205ENST00000558700 A0A0G2JLL6 359 aaPredicted RBP9.86□□□□□ -0.83
TRAF3-205ENST00000558700 CTNND1O60716 968 aaKnown RBP9.86□□□□□ -0.83
TRAF3-205ENST00000558700 BAG3O95817 575 aa9.86□□□□□ -0.83
TRAF3-205ENST00000558700 MS4A1P11836 297 aa9.86□□□□□ -0.83
TRAF3-205ENST00000558700 MAP3K10Q02779 954 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms