RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 GIMAP6Q6P9H5 292 aa30.61■■■□□ 2.49
SMAD6-202ENST00000557916 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.61■■■□□ 2.49
SMAD6-202ENST00000557916 CRACR2BQ8N4Y2 399 aaPredicted RBP30.61■■■□□ 2.49
SMAD6-202ENST00000557916 DNAJC5GQ8N7S2 189 aa30.61■■■□□ 2.49
SMAD6-202ENST00000557916 CLMNQ96JQ2 1002 aa30.61■■■□□ 2.49
SMAD6-202ENST00000557916 SLC10A4Q96EP9 437 aa30.6■■■□□ 2.49
SMAD6-202ENST00000557916 CAPNS2Q96L46 248 aa30.6■■■□□ 2.49
SMAD6-202ENST00000557916 TRIM34Q9BYJ4 488 aa30.6■■■□□ 2.49
SMAD6-202ENST00000557916 ECE1P42892 770 aa30.59■■■□□ 2.49
SMAD6-202ENST00000557916 VEGFBP49765 207 aa30.59■■■□□ 2.49
SMAD6-202ENST00000557916 PLCD1P51178 756 aa30.59■■■□□ 2.49
SMAD6-202ENST00000557916 METTL16Q86W50 562 aaKnown RBP30.59■■■□□ 2.49
SMAD6-202ENST00000557916 AMOTL1Q8IY63 956 aa30.59■■■□□ 2.49
SMAD6-202ENST00000557916 ZKSCAN4Q969J2 545 aaPredicted RBP30.59■■■□□ 2.49
SMAD6-202ENST00000557916 CCDC102AQ96A19 550 aa30.59■■■□□ 2.49
SMAD6-202ENST00000557916 CSADQ9Y600 493 aa30.59■■■□□ 2.49
SMAD6-202ENST00000557916 CEP350Q5VT06 3117 aa30.58■■■□□ 2.49
SMAD6-202ENST00000557916 PHF20L1A8MW92 1017 aa30.58■■■□□ 2.49
SMAD6-202ENST00000557916 USP17L12C9JPN9 530 aa30.58■■■□□ 2.49
SMAD6-202ENST00000557916 USP17L21D6R901 530 aa30.58■■■□□ 2.49
SMAD6-202ENST00000557916 CYP2D6P10635 497 aa30.58■■■□□ 2.49
SMAD6-202ENST00000557916 CHMLP26374 656 aa30.58■■■□□ 2.49
SMAD6-202ENST00000557916 INPP5BP32019 993 aa30.58■■■□□ 2.49
SMAD6-202ENST00000557916 VGLL4Q14135 290 aa30.58■■■□□ 2.49
SMAD6-202ENST00000557916 ZNF589Q86UQ0 364 aaPredicted RBP30.58■■■□□ 2.49
SMAD6-202ENST00000557916 NACAP1Q9BZK3 213 aa30.58■■■□□ 2.49
SMAD6-202ENST00000557916 EHD4Q9H223 541 aa30.58■■■□□ 2.49
SMAD6-202ENST00000557916 EPB41L4AQ9HCS5 686 aaPredicted RBP30.58■■■□□ 2.49
SMAD6-202ENST00000557916 SERPINB13Q9UIV8 391 aa30.58■■■□□ 2.49
SMAD6-202ENST00000557916 DDX60LQ5H9U9 1706 aaKnown RBP30.58■■■□□ 2.49
SMAD6-202ENST00000557916 MFAP1P55081 439 aaKnown RBP30.57■■■□□ 2.48
SMAD6-202ENST00000557916 CTR9Q6PD62 1173 aa30.57■■■□□ 2.48
SMAD6-202ENST00000557916 CCDC171Q6TFL3 1326 aa30.57■■■□□ 2.48
SMAD6-202ENST00000557916 IFNL3Q8IZI9 196 aa30.57■■■□□ 2.48
SMAD6-202ENST00000557916 WDR33Q9C0J8 1336 aaKnown RBP30.56■■■□□ 2.48
SMAD6-202ENST00000557916 TDO2P48775 406 aa30.56■■■□□ 2.48
SMAD6-202ENST00000557916 RASAL3Q86YV0 1011 aa30.56■■■□□ 2.48
SMAD6-202ENST00000557916 DNAJC18Q9H819 358 aa30.56■■■□□ 2.48
SMAD6-202ENST00000557916 ELP3Q9H9T3 547 aa30.56■■■□□ 2.48
SMAD6-202ENST00000557916 ARPP21Q9UBL0 812 aaPredicted RBP30.56■■■□□ 2.48
SMAD6-202ENST00000557916 SIPA1L1O43166 1804 aa30.56■■■□□ 2.48
SMAD6-202ENST00000557916 CYP2D7A0A087X1C5 515 aa30.56■■■□□ 2.48
SMAD6-202ENST00000557916 SLC10A3P09131 477 aa30.56■■■□□ 2.48
SMAD6-202ENST00000557916 EVX2Q03828 476 aa30.56■■■□□ 2.48
SMAD6-202ENST00000557916 C12orf60Q5U649 245 aa30.56■■■□□ 2.48
SMAD6-202ENST00000557916 VPS53Q5VIR6 699 aa30.56■■■□□ 2.48
SMAD6-202ENST00000557916 FAM155AB1AL88 458 aaPredicted RBP30.55■■■□□ 2.48
SMAD6-202ENST00000557916 SNCAIPQ9Y6H5 919 aa30.55■■■□□ 2.48
SMAD6-202ENST00000557916 OTOFQ9HC10 1997 aa30.54■■■□□ 2.48
SMAD6-202ENST00000557916 BAZ2AQ9UIF9 1905 aaKnown RBP30.54■■■□□ 2.48
SMAD6-202ENST00000557916 FOXP2O15409 715 aa30.54■■■□□ 2.48
SMAD6-202ENST00000557916 CTNND1O60716 968 aaKnown RBP30.54■■■□□ 2.48
SMAD6-202ENST00000557916 SBK1Q52WX2 424 aa30.54■■■□□ 2.48
SMAD6-202ENST00000557916 RUFY2Q8WXA3 655 aa30.54■■■□□ 2.48
SMAD6-202ENST00000557916 NAPBQ9H115 298 aa30.54■■■□□ 2.48
SMAD6-202ENST00000557916 NOL9Q5SY16 702 aaKnown RBP30.53■■■□□ 2.48
SMAD6-202ENST00000557916 HSPD1P10809 573 aaKnown RBP30.52■■■□□ 2.48
SMAD6-202ENST00000557916 GABPAQ06546 454 aa30.52■■■□□ 2.48
SMAD6-202ENST00000557916 MINDY4BA8MYZ0 360 aa30.51■■■□□ 2.47
SMAD6-202ENST00000557916 AOC2O75106 756 aa30.51■■■□□ 2.47
SMAD6-202ENST00000557916 RRP1BQ14684 758 aaKnown RBP30.51■■■□□ 2.47
SMAD6-202ENST00000557916 DYNLL2Q96FJ2 89 aa30.51■■■□□ 2.47
SMAD6-202ENST00000557916 RAD50Q92878 1312 aa30.5■■■□□ 2.47
SMAD6-202ENST00000557916 SMIM22K7EJ46 135 aa30.5■■■□□ 2.47
SMAD6-202ENST00000557916 CAP2P40123 477 aa30.5■■■□□ 2.47
SMAD6-202ENST00000557916 NOGQ13253 232 aa30.5■■■□□ 2.47
SMAD6-202ENST00000557916 SPRYD7Q5W111 196 aa30.5■■■□□ 2.47
SMAD6-202ENST00000557916 TATDN1Q6P1N9 297 aa30.5■■■□□ 2.47
SMAD6-202ENST00000557916 SCYL3Q8IZE3 742 aa30.5■■■□□ 2.47
SMAD6-202ENST00000557916 OPTNQ96CV9 577 aa30.5■■■□□ 2.47
SMAD6-202ENST00000557916 WNK4Q96J92 1243 aa30.5■■■□□ 2.47
SMAD6-202ENST00000557916 IL25Q9H293 177 aa30.5■■■□□ 2.47
SMAD6-202ENST00000557916 MKRN3Q13064 507 aaKnown RBP30.49■■■□□ 2.47
SMAD6-202ENST00000557916 ALX1Q15699 326 aa30.49■■■□□ 2.47
SMAD6-202ENST00000557916 ERO1BQ86YB8 467 aa30.49■■■□□ 2.47
SMAD6-202ENST00000557916 CNKSR2Q8WXI2 1034 aa30.49■■■□□ 2.47
SMAD6-202ENST00000557916 PICK1Q9NRD5 415 aa30.49■■■□□ 2.47
SMAD6-202ENST00000557916 SWAP70Q9UH65 585 aa30.49■■■□□ 2.47
SMAD6-202ENST00000557916 TAOK2Q9UL54 1235 aa30.49■■■□□ 2.47
SMAD6-202ENST00000557916 SPDYE5A6NIY4 337 aa30.48■■■□□ 2.47
SMAD6-202ENST00000557916 SHMT1P34896 483 aa30.48■■■□□ 2.47
SMAD6-202ENST00000557916 ZBTB48P10074 688 aaPredicted RBP30.47■■■□□ 2.47
SMAD6-202ENST00000557916 SLC44A5Q8NCS7 719 aa30.47■■■□□ 2.47
SMAD6-202ENST00000557916 OTUD5Q96G74 571 aa30.47■■■□□ 2.47
SMAD6-202ENST00000557916 ZIC5Q96T25 663 aa30.47■■■□□ 2.47
SMAD6-202ENST00000557916 FGAP02671 866 aa30.47■■■□□ 2.47
SMAD6-202ENST00000557916 GJA5P36382 358 aa30.47■■■□□ 2.47
SMAD6-202ENST00000557916 MAP2K2P36507 400 aa30.47■■■□□ 2.47
SMAD6-202ENST00000557916 C16orf86Q6ZW13 317 aa30.47■■■□□ 2.47
SMAD6-202ENST00000557916 SGSM2O43147 1006 aa30.46■■■□□ 2.47
SMAD6-202ENST00000557916 GDF11O95390 407 aa30.46■■■□□ 2.47
SMAD6-202ENST00000557916 PTPRAP18433 802 aa30.46■■■□□ 2.47
SMAD6-202ENST00000557916 CDK8P49336 464 aa30.46■■■□□ 2.47
SMAD6-202ENST00000557916 PPATQ06203 517 aa30.46■■■□□ 2.47
SMAD6-202ENST00000557916 CERKLQ49MI3 558 aaPredicted RBP30.46■■■□□ 2.47
SMAD6-202ENST00000557916 CDC45O75419 566 aa30.45■■■□□ 2.46
SMAD6-202ENST00000557916 KIF23Q02241 960 aaPredicted RBP30.45■■■□□ 2.46
SMAD6-202ENST00000557916 PPARAQ07869 468 aa30.45■■■□□ 2.46
SMAD6-202ENST00000557916 ZMYM6O95789 1325 aa30.44■■■□□ 2.46
SMAD6-202ENST00000557916 ROBO3Q96MS0 1386 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms