RNA–Protein interactions for RNA: ENST00000557344.5

APEX1-218, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-218ENST00000557344 ZSCAN29Q8IWY8 852 aaPredicted RBP12.55□□□□□ -0.4
APEX1-218ENST00000557344 PROCA1Q8NCQ7 364 aaPredicted RBP12.55□□□□□ -0.4
APEX1-218ENST00000557344 TRIB2Q92519 343 aa12.55□□□□□ -0.4
APEX1-218ENST00000557344 TNNQ9UQP3 1299 aa12.55□□□□□ -0.4
APEX1-218ENST00000557344 SALL1Q9NSC2 1324 aa12.55□□□□□ -0.4
APEX1-218ENST00000557344 PHIPQ8WWQ0 1821 aa12.55□□□□□ -0.4
APEX1-218ENST00000557344 RFX7Q2KHR2 1363 aa12.55□□□□□ -0.4
APEX1-218ENST00000557344 MYH13Q9UKX3 1938 aa12.54□□□□□ -0.4
APEX1-218ENST00000557344 UBTFL1P0CB47 393 aaPredicted RBP12.54□□□□□ -0.4
APEX1-218ENST00000557344 TRIM27P14373 513 aa12.54□□□□□ -0.4
APEX1-218ENST00000557344 MEIS3Q99687 375 aa12.54□□□□□ -0.4
APEX1-218ENST00000557344 DDX4Q9NQI0 724 aaKnown RBP12.54□□□□□ -0.4
APEX1-218ENST00000557344 GAKO14976 1311 aa12.54□□□□□ -0.4
APEX1-218ENST00000557344 ZBED9Q6R2W3 1325 aa12.54□□□□□ -0.4
APEX1-218ENST00000557344 COL2A1P02458 1487 aaPredicted RBP12.53□□□□□ -0.4
APEX1-218ENST00000557344 DOCK2Q92608 1830 aa12.53□□□□□ -0.4
APEX1-218ENST00000557344 EYA2O00167 538 aa12.53□□□□□ -0.4
APEX1-218ENST00000557344 TBC1D12O60347 775 aa12.53□□□□□ -0.4
APEX1-218ENST00000557344 PRKAR2AP13861 404 aaKnown RBP12.53□□□□□ -0.4
APEX1-218ENST00000557344 MDM2Q00987 491 aaPredicted RBP12.53□□□□□ -0.4
APEX1-218ENST00000557344 SPP2Q13103 211 aa12.53□□□□□ -0.4
APEX1-218ENST00000557344 LRRC26Q2I0M4 334 aa12.53□□□□□ -0.4
APEX1-218ENST00000557344 ATG9AQ7Z3C6 839 aa12.53□□□□□ -0.4
APEX1-218ENST00000557344 ASCC2Q9H1I8 757 aaPredicted RBP12.53□□□□□ -0.4
APEX1-218ENST00000557344 MORF4L1Q9UBU8 362 aa12.53□□□□□ -0.4
APEX1-218ENST00000557344 DOCK1Q14185 1865 aa12.53□□□□□ -0.4
APEX1-218ENST00000557344 IPO8O15397 1037 aaKnown RBP12.52□□□□□ -0.41
APEX1-218ENST00000557344 XRCC5P13010 732 aaKnown RBP12.52□□□□□ -0.41
APEX1-218ENST00000557344 CYP2B6P20813 491 aa12.52□□□□□ -0.41
APEX1-218ENST00000557344 PABPC4Q13310 644 aaKnown RBP eCLIP12.52□□□□□ -0.41
APEX1-218ENST00000557344 ATF7IPQ6VMQ6 1270 aa12.52□□□□□ -0.41
APEX1-218ENST00000557344 ZNF280CQ8ND82 737 aa12.52□□□□□ -0.41
APEX1-218ENST00000557344 FAM163AQ96GL9 167 aaPredicted RBP12.52□□□□□ -0.41
APEX1-218ENST00000557344 FAM161BQ96MY7 647 aa12.52□□□□□ -0.41
APEX1-218ENST00000557344 GNL3LQ9NVN8 582 aaKnown RBP12.52□□□□□ -0.41
APEX1-218ENST00000557344 DENND2AQ9ULE3 1009 aa12.52□□□□□ -0.41
APEX1-218ENST00000557344 SEMA3EO15041 775 aa12.51□□□□□ -0.41
APEX1-218ENST00000557344 ZBTB22O15209 634 aa12.51□□□□□ -0.41
APEX1-218ENST00000557344 HMGCS2P54868 508 aa12.51□□□□□ -0.41
APEX1-218ENST00000557344 SH3D19Q5HYK7 790 aa12.51□□□□□ -0.41
APEX1-218ENST00000557344 LHX8Q68G74 356 aa12.51□□□□□ -0.41
APEX1-218ENST00000557344 FRAT1Q92837 279 aaPredicted RBP12.51□□□□□ -0.41
APEX1-218ENST00000557344 TBC1D2Q9BYX2 928 aa12.51□□□□□ -0.41
APEX1-218ENST00000557344 OSBPL5Q9H0X9 879 aaPredicted RBP12.51□□□□□ -0.41
APEX1-218ENST00000557344 PRDM6Q9NQX0 595 aa12.51□□□□□ -0.41
APEX1-218ENST00000557344 PLXNB2O15031 1838 aa12.51□□□□□ -0.41
APEX1-218ENST00000557344 FAM196BA6NMK8 535 aa12.5□□□□□ -0.41
APEX1-218ENST00000557344 CIAO1O76071 339 aa12.5□□□□□ -0.41
APEX1-218ENST00000557344 PHKA1P46020 1223 aa12.5□□□□□ -0.41
APEX1-218ENST00000557344 CACNB2Q08289 660 aaPredicted RBP12.5□□□□□ -0.41
APEX1-218ENST00000557344 PICALMQ13492 652 aa12.5□□□□□ -0.41
APEX1-218ENST00000557344 ATP2B3Q16720 1220 aa12.5□□□□□ -0.41
APEX1-218ENST00000557344 TRMT44Q8IYL2 757 aaKnown RBP12.5□□□□□ -0.41
APEX1-218ENST00000557344 ZGPATQ8N5A5 531 aaKnown RBP12.5□□□□□ -0.41
APEX1-218ENST00000557344 NUDT12Q9BQG2 462 aa12.5□□□□□ -0.41
APEX1-218ENST00000557344 COPRSQ9NQ92 184 aa12.5□□□□□ -0.41
APEX1-218ENST00000557344 FBXO3Q9UK99 471 aa12.5□□□□□ -0.41
APEX1-218ENST00000557344 MYH2Q9UKX2 1941 aa12.49□□□□□ -0.41
APEX1-218ENST00000557344 LOC285556D6RIA3 1793 aa12.49□□□□□ -0.41
APEX1-218ENST00000557344 NPM3O75607 178 aaKnown RBP12.49□□□□□ -0.41
APEX1-218ENST00000557344 GNAI3P08754 354 aa12.49□□□□□ -0.41
APEX1-218ENST00000557344 BTDP43251 543 aa12.49□□□□□ -0.41
APEX1-218ENST00000557344 RHBDL3P58872 404 aa12.49□□□□□ -0.41
APEX1-218ENST00000557344 MTX1Q13505 466 aa12.49□□□□□ -0.41
APEX1-218ENST00000557344 ZNF697Q5TEC3 545 aa12.49□□□□□ -0.41
APEX1-218ENST00000557344 ZKSCAN2Q63HK3 967 aa12.49□□□□□ -0.41
APEX1-218ENST00000557344 DZIP1Q86YF9 867 aaKnown RBP12.49□□□□□ -0.41
APEX1-218ENST00000557344 SLF2Q8IX21 1173 aa12.49□□□□□ -0.41
APEX1-218ENST00000557344 SOCS4Q8WXH5 440 aa12.49□□□□□ -0.41
APEX1-218ENST00000557344 USP6NLQ92738 828 aa12.49□□□□□ -0.41
APEX1-218ENST00000557344 CLUAP1Q96AJ1 413 aa12.49□□□□□ -0.41
APEX1-218ENST00000557344 CDX2Q99626 313 aaPredicted RBP12.49□□□□□ -0.41
APEX1-218ENST00000557344 LBHD1Q9BQE6 289 aaPredicted RBP12.49□□□□□ -0.41
APEX1-218ENST00000557344 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.49□□□□□ -0.41
APEX1-218ENST00000557344 CEP126Q9P2H0 1117 aa12.49□□□□□ -0.41
APEX1-218ENST00000557344 HDAC5Q9UQL6 1122 aa12.49□□□□□ -0.41
APEX1-218ENST00000557344 VCANP13611 3396 aa12.49□□□□□ -0.41
APEX1-218ENST00000557344 USP17L5A8MUK1 530 aa12.48□□□□□ -0.41
APEX1-218ENST00000557344 ZKSCAN1P17029 563 aaPredicted RBP12.48□□□□□ -0.41
APEX1-218ENST00000557344 CCND3P30281 292 aaPredicted RBP12.48□□□□□ -0.41
APEX1-218ENST00000557344 HOXA7P31268 230 aaPredicted RBP12.48□□□□□ -0.41
APEX1-218ENST00000557344 CAP2P40123 477 aa12.48□□□□□ -0.41
APEX1-218ENST00000557344 RRP1BQ14684 758 aaKnown RBP12.48□□□□□ -0.41
APEX1-218ENST00000557344 TMEM57Q8N5G2 664 aa12.48□□□□□ -0.41
APEX1-218ENST00000557344 P2RX7Q99572 595 aaKnown RBP12.48□□□□□ -0.41
APEX1-218ENST00000557344 SIL1Q9H173 461 aa12.48□□□□□ -0.41
APEX1-218ENST00000557344 TXNRD2Q9NNW7 524 aa12.48□□□□□ -0.41
APEX1-218ENST00000557344 PA2G4Q9UQ80 394 aaKnown RBP12.48□□□□□ -0.41
APEX1-218ENST00000557344 MROH7-TTC4A0A0A0MT08 1334 aa12.47□□□□□ -0.41
APEX1-218ENST00000557344 GPR75-ASB3A0A0A6YYF3 556 aa12.47□□□□□ -0.41
APEX1-218ENST00000557344 PEX10O60683 326 aa12.47□□□□□ -0.41
APEX1-218ENST00000557344 IL15P40933 162 aaPredicted RBP12.47□□□□□ -0.41
APEX1-218ENST00000557344 IRX3P78415 501 aaPredicted RBP12.47□□□□□ -0.41
APEX1-218ENST00000557344 CCL14Q16627 93 aa12.47□□□□□ -0.41
APEX1-218ENST00000557344 CCDC102BQ68D86 513 aa12.47□□□□□ -0.41
APEX1-218ENST00000557344 GPRC5AQ8NFJ5 357 aa12.47□□□□□ -0.41
APEX1-218ENST00000557344 MAFAQ8NHW3 353 aaPredicted RBP12.47□□□□□ -0.41
APEX1-218ENST00000557344 SEMA6BQ9H3T3 888 aa12.47□□□□□ -0.41
APEX1-218ENST00000557344 ABCF2Q9UG63 623 aa12.47□□□□□ -0.41
APEX1-218ENST00000557344 PDS5AQ29RF7 1337 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms