RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	LCORL	Q8N3X6	602 aa		10.68	□□□□□ -0.7
PRKCH-222	ENST00000556778	C2orf69	Q8N8R5	385 aa		10.68	□□□□□ -0.7
PRKCH-222	ENST00000556778	FAM151A	Q8WW52	585 aa		10.68	□□□□□ -0.7
PRKCH-222	ENST00000556778	GPATCH3	Q96I76	525 aa		10.68	□□□□□ -0.7
PRKCH-222	ENST00000556778	CLMN	Q96JQ2	1002 aa		10.68	□□□□□ -0.7
PRKCH-222	ENST00000556778	SEC62	Q99442	399 aa	Known RBP	10.68	□□□□□ -0.7
PRKCH-222	ENST00000556778	RIOK1	Q9BRS2	568 aa	Known RBP	10.68	□□□□□ -0.7
PRKCH-222	ENST00000556778	IDI2	Q9BXS1	227 aa		10.68	□□□□□ -0.7
PRKCH-222	ENST00000556778	PUS7L	Q9H0K6	701 aa	Known RBP	10.68	□□□□□ -0.7
PRKCH-222	ENST00000556778	ARMT1	Q9H993	441 aa		10.68	□□□□□ -0.7
PRKCH-222	ENST00000556778	TMOD2	Q9NZR1	351 aa		10.68	□□□□□ -0.7
PRKCH-222	ENST00000556778	ANGEL1	Q9UNK9	670 aa	Known RBP	10.68	□□□□□ -0.7
PRKCH-222	ENST00000556778	CEP350	Q5VT06	3117 aa		10.68	□□□□□ -0.7
PRKCH-222	ENST00000556778	RASSF10	A6NK89	507 aa		10.67	□□□□□ -0.7
PRKCH-222	ENST00000556778	FAM196B	A6NMK8	535 aa		10.67	□□□□□ -0.7
PRKCH-222	ENST00000556778	AOC2	O75106	756 aa		10.67	□□□□□ -0.7
PRKCH-222	ENST00000556778	GLRX3	O76003	335 aa	Known RBP	10.67	□□□□□ -0.7
PRKCH-222	ENST00000556778	SLC34A2	O95436	690 aa		10.67	□□□□□ -0.7
PRKCH-222	ENST00000556778	BAG3	O95817	575 aa		10.67	□□□□□ -0.7
PRKCH-222	ENST00000556778	TNNI2	P48788	182 aa		10.67	□□□□□ -0.7
PRKCH-222	ENST00000556778	EMP3	P54852	163 aa		10.67	□□□□□ -0.7
PRKCH-222	ENST00000556778	MFSD10	Q14728	455 aa		10.67	□□□□□ -0.7
PRKCH-222	ENST00000556778	SUPT20HL1	Q3ZLR7	823 aa		10.67	□□□□□ -0.7
PRKCH-222	ENST00000556778	FKBP1C	Q5VVH2	108 aa		10.67	□□□□□ -0.7
PRKCH-222	ENST00000556778	FAM83A	Q86UY5	434 aa		10.67	□□□□□ -0.7
PRKCH-222	ENST00000556778	KBTBD3	Q8NAB2	608 aa		10.67	□□□□□ -0.7
PRKCH-222	ENST00000556778	OSBP2	Q969R2	916 aa		10.67	□□□□□ -0.7
PRKCH-222	ENST00000556778	SAP30BP	Q9UHR5	308 aa	Known RBP	10.67	□□□□□ -0.7
PRKCH-222	ENST00000556778	RFX7	Q2KHR2	1363 aa		10.66	□□□□□ -0.7
PRKCH-222	ENST00000556778	PSME4	Q14997	1843 aa		10.66	□□□□□ -0.7
PRKCH-222	ENST00000556778	MAGEB6P1	A0A0J9YX57	407 aa		10.66	□□□□□ -0.7
PRKCH-222	ENST00000556778	FAM155A	B1AL88	458 aa	Predicted RBP	10.66	□□□□□ -0.7
PRKCH-222	ENST00000556778		M0R2C6	588 aa		10.66	□□□□□ -0.7
PRKCH-222	ENST00000556778	ERC2	O15083	957 aa		10.66	□□□□□ -0.7
PRKCH-222	ENST00000556778	TNFAIP1	Q13829	316 aa		10.66	□□□□□ -0.7
PRKCH-222	ENST00000556778	LDLRAD1	Q5T700	205 aa		10.66	□□□□□ -0.7
PRKCH-222	ENST00000556778	SDR42E1	Q8WUS8	393 aa		10.66	□□□□□ -0.7
PRKCH-222	ENST00000556778	KLRG1	Q96E93	195 aa		10.66	□□□□□ -0.7
PRKCH-222	ENST00000556778	PALD1	Q9ULE6	856 aa		10.66	□□□□□ -0.7
PRKCH-222	ENST00000556778	PPP2R3B	Q9Y5P8	575 aa		10.66	□□□□□ -0.7
PRKCH-222	ENST00000556778	RNF113A	O15541	343 aa	Known RBP	10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	ENTPD3	O75355	529 aa		10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	MBD4	O95243	580 aa		10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	NEFL	P07196	543 aa		10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	CYP2D6	P10635	497 aa		10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	ZNF157	P51786	506 aa	Predicted RBP	10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	RRP1B	Q14684	758 aa	Known RBP	10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	UBE3C	Q15386	1083 aa		10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	RGMB	Q6NW40	437 aa		10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	ZKSCAN4	Q969J2	545 aa	Predicted RBP	10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	RILPL2	Q969X0	211 aa		10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	CCDC136	Q96JN2	1154 aa		10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	CAPNS2	Q96L46	248 aa		10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	CSRNP1	Q96S65	589 aa		10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	LARP6	Q9BRS8	491 aa	Known RBP	10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	NOL10	Q9BSC4	688 aa	Known RBP	10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	FSD1	Q9BTV5	496 aa		10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	OSBPL5	Q9H0X9	879 aa	Predicted RBP	10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	OSBPL3	Q9H4L5	887 aa		10.65	□□□□□ -0.7
PRKCH-222	ENST00000556778	FLT1	P17948	1338 aa		10.64	□□□□□ -0.71
PRKCH-222	ENST00000556778	WDR33	Q9C0J8	1336 aa	Known RBP	10.64	□□□□□ -0.71
PRKCH-222	ENST00000556778	CYP2D7	A0A087X1C5	515 aa		10.64	□□□□□ -0.71
PRKCH-222	ENST00000556778	TRIM6-TRIM34	B2RNG4	842 aa		10.64	□□□□□ -0.71
PRKCH-222	ENST00000556778	GSPT1	P15170	499 aa	Known RBP	10.64	□□□□□ -0.71
PRKCH-222	ENST00000556778	INPP5B	P32019	993 aa		10.64	□□□□□ -0.71
PRKCH-222	ENST00000556778	NF2	P35240	595 aa		10.64	□□□□□ -0.71
PRKCH-222	ENST00000556778	JAG1	P78504	1218 aa		10.64	□□□□□ -0.71
PRKCH-222	ENST00000556778	SHROOM1	Q2M3G4	852 aa	Predicted RBP	10.64	□□□□□ -0.71
PRKCH-222	ENST00000556778	ARSI	Q5FYB1	569 aa		10.64	□□□□□ -0.71
PRKCH-222	ENST00000556778	CCDC129	Q6ZRS4	1044 aa		10.64	□□□□□ -0.71
PRKCH-222	ENST00000556778	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
PRKCH-222	ENST00000556778	DDX27	Q96GQ7	796 aa	Known RBP	10.64	□□□□□ -0.71
PRKCH-222	ENST00000556778	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
PRKCH-222	ENST00000556778	ELP3	Q9H9T3	547 aa		10.64	□□□□□ -0.71
PRKCH-222	ENST00000556778	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.64	□□□□□ -0.71
PRKCH-222	ENST00000556778	ATRNL1	Q5VV63	1379 aa		10.64	□□□□□ -0.71
PRKCH-222	ENST00000556778	PHF20L1	A8MW92	1017 aa		10.63	□□□□□ -0.71
PRKCH-222	ENST00000556778	PPP1R12B	O60237	982 aa	Predicted RBP	10.63	□□□□□ -0.71
PRKCH-222	ENST00000556778	GJA5	P36382	358 aa		10.63	□□□□□ -0.71
PRKCH-222	ENST00000556778	USP5	P45974	858 aa		10.63	□□□□□ -0.71
PRKCH-222	ENST00000556778	PLCD1	P51178	756 aa		10.63	□□□□□ -0.71
PRKCH-222	ENST00000556778	FKBP1B	P68106	108 aa		10.63	□□□□□ -0.71
PRKCH-222	ENST00000556778	MAP3K9	P80192	1104 aa		10.63	□□□□□ -0.71
PRKCH-222	ENST00000556778	VGLL4	Q14135	290 aa		10.63	□□□□□ -0.71
PRKCH-222	ENST00000556778	MAP3K11	Q16584	847 aa		10.63	□□□□□ -0.71
PRKCH-222	ENST00000556778	ARMC9	Q7Z3E5	817 aa		10.63	□□□□□ -0.71
PRKCH-222	ENST00000556778	RASAL3	Q86YV0	1011 aa		10.63	□□□□□ -0.71
PRKCH-222	ENST00000556778	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
PRKCH-222	ENST00000556778	EVI5L	Q96CN4	794 aa		10.63	□□□□□ -0.71
PRKCH-222	ENST00000556778	FAM227B	Q96M60	508 aa		10.63	□□□□□ -0.71
PRKCH-222	ENST00000556778	STRBP	Q96SI9	672 aa	Known RBP	10.63	□□□□□ -0.71
PRKCH-222	ENST00000556778	PCDHGA4	Q9Y5G9	962 aa		10.63	□□□□□ -0.71
PRKCH-222	ENST00000556778	SDS	P20132	328 aa		10.62	□□□□□ -0.71
PRKCH-222	ENST00000556778	KIF23	Q02241	960 aa	Predicted RBP	10.62	□□□□□ -0.71
PRKCH-222	ENST00000556778	ZMYM1	Q5SVZ6	1142 aa		10.62	□□□□□ -0.71
PRKCH-222	ENST00000556778	ZSCAN25	Q6NSZ9	544 aa		10.62	□□□□□ -0.71
PRKCH-222	ENST00000556778	CENPQ	Q7L2Z9	268 aa	Predicted RBP	10.62	□□□□□ -0.71
PRKCH-222	ENST00000556778	CCDC84	Q86UT8	332 aa	Predicted RBP	10.62	□□□□□ -0.71

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