RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 TEFQ10587 303 aa12□□□□□ -0.49
GTF2A1-204ENST00000556268 C1orf53Q5VUE5 145 aa12□□□□□ -0.49
GTF2A1-204ENST00000556268 ZNF622Q969S3 477 aaKnown RBP eCLIP12□□□□□ -0.497e-8■■■■■ 34.9
GTF2A1-204ENST00000556268 PHACTR3Q96KR7 559 aa12□□□□□ -0.49
GTF2A1-204ENST00000556268 SETDB2Q96T68 719 aa12□□□□□ -0.49
GTF2A1-204ENST00000556268 OXCT2Q9BYC2 517 aaPredicted RBP12□□□□□ -0.49
GTF2A1-204ENST00000556268 ZMIZ1Q9ULJ6 1067 aa12□□□□□ -0.49
GTF2A1-204ENST00000556268 LTBP3Q9NS15 1303 aa12□□□□□ -0.49
GTF2A1-204ENST00000556268 CEMIPQ8WUJ3 1361 aa12□□□□□ -0.49
GTF2A1-204ENST00000556268 WDR90Q96KV7 1748 aa12□□□□□ -0.49
GTF2A1-204ENST00000556268 KLRG2A4D1S0 409 aaPredicted RBP11.99□□□□□ -0.49
GTF2A1-204ENST00000556268 BCRP11274 1271 aa11.99□□□□□ -0.49
GTF2A1-204ENST00000556268 CD33P20138 364 aa11.99□□□□□ -0.49
GTF2A1-204ENST00000556268 IGFBP4P22692 258 aa11.99□□□□□ -0.49
GTF2A1-204ENST00000556268 STYK1Q6J9G0 422 aa11.99□□□□□ -0.49
GTF2A1-204ENST00000556268 CCER1Q8TC90 406 aaPredicted RBP11.99□□□□□ -0.49
GTF2A1-204ENST00000556268 FMNL2Q96PY5 1086 aa11.99□□□□□ -0.49
GTF2A1-204ENST00000556268 USP16Q9Y5T5 823 aa11.99□□□□□ -0.49
GTF2A1-204ENST00000556268 SRGNP10124 158 aa11.98□□□□□ -0.49
GTF2A1-204ENST00000556268 CLEC4GQ6UXB4 293 aa11.98□□□□□ -0.49
GTF2A1-204ENST00000556268 ALDH16A1Q8IZ83 802 aa11.98□□□□□ -0.49
GTF2A1-204ENST00000556268 HSH2DQ96JZ2 352 aa11.98□□□□□ -0.49
GTF2A1-204ENST00000556268 SERPINA10Q9UK55 444 aa11.98□□□□□ -0.49
GTF2A1-204ENST00000556268 BTBD11A6QL63 1104 aa11.97□□□□□ -0.49
GTF2A1-204ENST00000556268 U2SURPO15042 1029 aaKnown RBP11.97□□□□□ -0.49
GTF2A1-204ENST00000556268 EFSO43281 561 aa11.97□□□□□ -0.49
GTF2A1-204ENST00000556268 MASTLQ96GX5 879 aa11.97□□□□□ -0.49
GTF2A1-204ENST00000556268 NEUROD4Q9HD90 331 aa11.97□□□□□ -0.49
GTF2A1-204ENST00000556268 UBR2Q8IWV8 1755 aa11.97□□□□□ -0.49
GTF2A1-204ENST00000556268 TNRC6CQ9HCJ0 1690 aaKnown RBP11.97□□□□□ -0.49
GTF2A1-204ENST00000556268 COL3A1P02461 1466 aaPredicted RBP11.96□□□□□ -0.49
GTF2A1-204ENST00000556268 STK32AQ8WU08 396 aa11.96□□□□□ -0.49
GTF2A1-204ENST00000556268 WEE1P30291 646 aa11.95□□□□□ -0.5
GTF2A1-204ENST00000556268 ELOAQ14241 798 aaKnown RBP11.95□□□□□ -0.5
GTF2A1-204ENST00000556268 SOGA3Q5TF21 947 aa11.95□□□□□ -0.5
GTF2A1-204ENST00000556268 CNBD1Q8NA66 436 aa11.95□□□□□ -0.5
GTF2A1-204ENST00000556268 TAOK3Q9H2K8 898 aa11.95□□□□□ -0.5
GTF2A1-204ENST00000556268 DLEC1Q9Y238 1755 aa11.95□□□□□ -0.5
GTF2A1-204ENST00000556268 PRAMEF22A3QJZ6 481 aa11.94□□□□□ -0.5
GTF2A1-204ENST00000556268 OIP5O43482 229 aa11.94□□□□□ -0.5
GTF2A1-204ENST00000556268 DDNO94850 711 aaPredicted RBP11.94□□□□□ -0.5
GTF2A1-204ENST00000556268 SNRPA1P09661 255 aaKnown RBP11.94□□□□□ -0.5
GTF2A1-204ENST00000556268 PRPF40BQ6NWY9 871 aaKnown RBP11.94□□□□□ -0.5
GTF2A1-204ENST00000556268 CCDC82Q8N4S0 544 aa11.94□□□□□ -0.5
GTF2A1-204ENST00000556268 ZNF280CQ8ND82 737 aa11.94□□□□□ -0.5
GTF2A1-204ENST00000556268 C1orf115Q9H7X2 142 aa11.94□□□□□ -0.5
GTF2A1-204ENST00000556268 ENAMQ9NRM1 1142 aa11.94□□□□□ -0.5
GTF2A1-204ENST00000556268 GDF2Q9UK05 429 aaPredicted RBP11.94□□□□□ -0.5
GTF2A1-204ENST00000556268 HTATSF1O43719 755 aaKnown RBP11.93□□□□□ -0.5
GTF2A1-204ENST00000556268 ATG7O95352 703 aa11.93□□□□□ -0.5
GTF2A1-204ENST00000556268 HSPA1AP0DMV8 641 aaKnown RBP11.93□□□□□ -0.5
GTF2A1-204ENST00000556268 HSPA1BP0DMV9 641 aaKnown RBP11.93□□□□□ -0.5
GTF2A1-204ENST00000556268 NPR1P16066 1061 aa11.93□□□□□ -0.5
GTF2A1-204ENST00000556268 PRKAR2BP31323 418 aa11.93□□□□□ -0.5
GTF2A1-204ENST00000556268 ST5P78524 1137 aa11.93□□□□□ -0.5
GTF2A1-204ENST00000556268 TPTE2Q6XPS3 522 aa11.93□□□□□ -0.5
GTF2A1-204ENST00000556268 C1orf229Q6ZS94 237 aaPredicted RBP11.93□□□□□ -0.5
GTF2A1-204ENST00000556268 NPM2Q86SE8 214 aaKnown RBP11.93□□□□□ -0.5
GTF2A1-204ENST00000556268 GOLGA6L1Q8N7Z2 621 aa11.93□□□□□ -0.5
GTF2A1-204ENST00000556268 PBXIP1Q96AQ6 731 aa11.93□□□□□ -0.5
GTF2A1-204ENST00000556268 SUSD3Q96L08 255 aa11.93□□□□□ -0.5
GTF2A1-204ENST00000556268 GGA1Q9UJY5 639 aa11.93□□□□□ -0.5
GTF2A1-204ENST00000556268 CCDC88AQ3V6T2 1871 aa11.93□□□□□ -0.5
GTF2A1-204ENST00000556268 ANKRD31Q8N7Z5 1873 aa11.93□□□□□ -0.5
GTF2A1-204ENST00000556268 FER1L6Q2WGJ9 1857 aa11.92□□□□□ -0.5
GTF2A1-204ENST00000556268 LAMC2Q13753 1193 aa11.92□□□□□ -0.5
GTF2A1-204ENST00000556268 MARK1Q9P0L2 795 aa11.92□□□□□ -0.5
GTF2A1-204ENST00000556268 VIRMAQ69YN4 1812 aaKnown RBP11.92□□□□□ -0.5
GTF2A1-204ENST00000556268 PASKQ96RG2 1323 aa11.91□□□□□ -0.5
GTF2A1-204ENST00000556268 SLX4Q8IY92 1834 aa11.91□□□□□ -0.5
GTF2A1-204ENST00000556268 ARAFP10398 606 aa11.91□□□□□ -0.5
GTF2A1-204ENST00000556268 MARSP56192 900 aaKnown RBP11.91□□□□□ -0.5
GTF2A1-204ENST00000556268 TAF7Q15545 349 aaPredicted RBP11.91□□□□□ -0.5
GTF2A1-204ENST00000556268 RTN1Q16799 776 aa11.91□□□□□ -0.5
GTF2A1-204ENST00000556268 SWI5Q1ZZU3 235 aa11.91□□□□□ -0.5
GTF2A1-204ENST00000556268 SLCO4C1Q6ZQN7 724 aa11.91□□□□□ -0.5
GTF2A1-204ENST00000556268 NBPF5PQ86XG9 351 aaPredicted RBP11.91□□□□□ -0.5
GTF2A1-204ENST00000556268 NEDD1Q8NHV4 660 aa11.91□□□□□ -0.5
GTF2A1-204ENST00000556268 TAF1DQ9H5J8 278 aaPredicted RBP11.91□□□□□ -0.5
GTF2A1-204ENST00000556268 ANKIB1Q9P2G1 1089 aa11.91□□□□□ -0.5
GTF2A1-204ENST00000556268 NUDCQ9Y266 331 aa11.91□□□□□ -0.5
GTF2A1-204ENST00000556268 SIPA1L3O60292 1781 aaPredicted RBP11.91□□□□□ -0.5
GTF2A1-204ENST00000556268 DICER1Q9UPY3 1922 aaKnown RBP11.9□□□□□ -0.5
GTF2A1-204ENST00000556268 IQCA1LA6NCM1 817 aa11.9□□□□□ -0.5
GTF2A1-204ENST00000556268 SHISA8B8ZZ34 492 aa11.9□□□□□ -0.5
GTF2A1-204ENST00000556268 PIP4K2AP48426 406 aaPredicted RBP11.9□□□□□ -0.5
GTF2A1-204ENST00000556268 HLFQ16534 295 aa11.9□□□□□ -0.5
GTF2A1-204ENST00000556268 MCM10Q7L590 875 aa11.9□□□□□ -0.5
GTF2A1-204ENST00000556268 LDHDQ86WU2 507 aa11.9□□□□□ -0.5
GTF2A1-204ENST00000556268 RTKN2Q8IZC4 609 aa11.9□□□□□ -0.5
GTF2A1-204ENST00000556268 RTF1Q92541 710 aaKnown RBP11.9□□□□□ -0.5
GTF2A1-204ENST00000556268 CFAP53Q96M91 514 aa11.9□□□□□ -0.5
GTF2A1-204ENST00000556268 ZNF652Q9Y2D9 606 aa11.9□□□□□ -0.5
GTF2A1-204ENST00000556268 FZD9O00144 591 aa11.89□□□□□ -0.51
GTF2A1-204ENST00000556268 PPP2R1AP30153 589 aa11.89□□□□□ -0.51
GTF2A1-204ENST00000556268 ALDH1B1P30837 517 aa11.89□□□□□ -0.51
GTF2A1-204ENST00000556268 FKBP4Q02790 459 aaKnown RBP eCLIP11.89□□□□□ -0.51
GTF2A1-204ENST00000556268 TYRO3Q06418 890 aa11.89□□□□□ -0.51
GTF2A1-204ENST00000556268 SFSWAPQ12872 951 aaKnown RBP11.89□□□□□ -0.51
GTF2A1-204ENST00000556268 GRIN2CQ14957 1233 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms