RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 ERO1AQ96HE7 468 aa11.96□□□□□ -0.49
ACTN1-216ENST00000556083 BICC1Q9H694 974 aaKnown RBP11.96□□□□□ -0.49
ACTN1-216ENST00000556083 ATP5JP18859 108 aa11.96□□□□□ -0.49
ACTN1-216ENST00000556083 GBP1P32455 592 aa11.96□□□□□ -0.49
ACTN1-216ENST00000556083 MCM7P33993 719 aa11.96□□□□□ -0.49
ACTN1-216ENST00000556083 ZNF713Q8N859 430 aaPredicted RBP11.96□□□□□ -0.49
ACTN1-216ENST00000556083 RABGAP1Q9Y3P9 1069 aa11.96□□□□□ -0.49
ACTN1-216ENST00000556083 BLMP54132 1417 aaPredicted RBP11.96□□□□□ -0.49
ACTN1-216ENST00000556083 ERICH4A6NGS2 130 aa11.96□□□□□ -0.49
ACTN1-216ENST00000556083 MSL1Q68DK7 614 aa11.96□□□□□ -0.49
ACTN1-216ENST00000556083 KRT26Q7Z3Y9 468 aa11.96□□□□□ -0.49
ACTN1-216ENST00000556083 KCNH3Q9ULD8 1083 aa11.96□□□□□ -0.49
ACTN1-216ENST00000556083 GOLGA6CA6NDK9 693 aa11.96□□□□□ -0.5
ACTN1-216ENST00000556083 GOLGA6BA6NDN3 693 aa11.96□□□□□ -0.5
ACTN1-216ENST00000556083 GOLGA6DP0CG33 693 aa11.96□□□□□ -0.5
ACTN1-216ENST00000556083 TERF1P54274 439 aa11.96□□□□□ -0.5
ACTN1-216ENST00000556083 PLS1Q14651 629 aa11.96□□□□□ -0.5
ACTN1-216ENST00000556083 CFAP157Q5JU67 520 aa11.96□□□□□ -0.5
ACTN1-216ENST00000556083 GOLGA6AQ9NYA3 693 aa11.96□□□□□ -0.5
ACTN1-216ENST00000556083 SOS2Q07890 1332 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-216ENST00000556083 A0A1B0GVL5 298 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 hCG_1984214I3L0E3 225 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 SGSM2O43147 1006 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 ANXA1P04083 346 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 ATP2B4P23634 1241 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 APOBRQ0VD83 1088 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 DPP8Q6V1X1 898 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-216ENST00000556083 ZNF365Q70YC5 407 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 NOD1Q9Y239 953 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 ARHGAP6O43182 974 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 FOSP01100 380 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-216ENST00000556083 IL13P35225 146 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 PDE4DQ08499 809 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 PAK1Q13153 545 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 BIRC3Q13489 604 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 TTC38Q5R3I4 469 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 FYB2Q5VWT5 728 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 MCF2L2Q86YR7 1114 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 IFT20Q8IY31 132 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 JPH2Q9BR39 696 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-216ENST00000556083 GPR108Q9NPR9 543 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 NOP56O00567 594 aaKnown RBP11.95□□□□□ -0.5
ACTN1-216ENST00000556083 GIPC1O14908 333 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 LPXNO60711 386 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 CCDC122Q5T0U0 273 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 RAB11FIP4Q86YS3 637 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 CCT6BQ92526 530 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 PLCB1Q9NQ66 1216 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 SLC1A4P43007 532 aa11.95□□□□□ -0.5
ACTN1-216ENST00000556083 ZNF274Q96GC6 653 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-216ENST00000556083 NAPGQ99747 312 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-216ENST00000556083 ASIC2Q16515 512 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 CCDC63Q8NA47 563 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 ATRIPQ8WXE1 791 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 CLSTN2Q9H4D0 955 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 LRWD1Q9UFC0 647 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 CFAP43Q8NDM7 1665 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 SPOPO43791 374 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 BAG6P46379 1132 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 SH3BGRP55822 239 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-216ENST00000556083 EVCP57679 992 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 TCIRG1Q13488 830 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 GCKRQ14397 625 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 LETM2Q2VYF4 491 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 PDZD4Q76G19 769 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-216ENST00000556083 CPLX4Q7Z7G2 160 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 FAM76AQ8TAV0 307 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 ACSBG1Q96GR2 724 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 XAGE2Q96GT9 111 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 PCDHB13Q9Y5F0 798 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 DNMT1P26358 1616 aaKnown RBP11.94□□□□□ -0.5
ACTN1-216ENST00000556083 PSDA5PKW4 1024 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-216ENST00000556083 F8W031 263 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-216ENST00000556083 LACTBP83111 547 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-216ENST00000556083 SLFN12Q8IYM2 578 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 P3H4Q92791 437 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 CCDC17Q96LX7 622 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 RUNDC3BQ96NL0 473 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 RAB3IPQ96QF0 476 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-216ENST00000556083 CUEDC2Q9H467 287 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 IFT122Q9HBG6 1241 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 METTL14Q9HCE5 456 aaKnown RBP11.94□□□□□ -0.5
ACTN1-216ENST00000556083 ATP7AQ04656 1500 aa11.94□□□□□ -0.5
ACTN1-216ENST00000556083 ZBTB24O43167 697 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-216ENST00000556083 NIM1KQ8IY84 436 aa11.93□□□□□ -0.5
ACTN1-216ENST00000556083 SMC1BQ8NDV3 1235 aa11.93□□□□□ -0.5
ACTN1-216ENST00000556083 LEO1Q8WVC0 666 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-216ENST00000556083 KIFC2Q96AC6 838 aa11.93□□□□□ -0.5
ACTN1-216ENST00000556083 TRPC6Q9Y210 931 aa11.93□□□□□ -0.5
ACTN1-216ENST00000556083 UTP11Q9Y3A2 253 aaKnown RBP11.93□□□□□ -0.5
ACTN1-216ENST00000556083 ARHGEF37A1IGU5 675 aa11.93□□□□□ -0.5
ACTN1-216ENST00000556083 PFDN6O15212 129 aa11.93□□□□□ -0.5
ACTN1-216ENST00000556083 GPAA1O43292 621 aa11.93□□□□□ -0.5
ACTN1-216ENST00000556083 GTF2F1P35269 517 aaKnown RBP eCLIP11.93□□□□□ -0.5
ACTN1-216ENST00000556083 SARNPP82979 210 aaKnown RBP11.93□□□□□ -0.5
ACTN1-216ENST00000556083 AOC3Q16853 763 aa11.93□□□□□ -0.5
ACTN1-216ENST00000556083 CSGALNACT2Q8N6G5 542 aa11.93□□□□□ -0.5
ACTN1-216ENST00000556083 BTG4Q9NY30 223 aa11.93□□□□□ -0.5
ACTN1-216ENST00000556083 IQSEC3Q9UPP2 1182 aaPredicted RBP11.93□□□□□ -0.5
ACTN1-216ENST00000556083 LAD1O00515 517 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms