RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 ZNF341Q9BYN7 854 aa14.93□□□□□ -0.02
ABCD4-222ENST00000555617 SLC28A3Q9HAS3 691 aa14.93□□□□□ -0.02
ABCD4-222ENST00000555617 DDX20Q9UHI6 824 aaKnown RBP14.93□□□□□ -0.02
ABCD4-222ENST00000555617 SLC45A1Q9Y2W3 748 aa14.93□□□□□ -0.02
ABCD4-222ENST00000555617 FLNBO75369 2602 aaKnown RBP14.93□□□□□ -0.02
ABCD4-222ENST00000555617 XRCC5P13010 732 aaKnown RBP14.92□□□□□ -0.02
ABCD4-222ENST00000555617 RAG1P15918 1043 aa14.92□□□□□ -0.02
ABCD4-222ENST00000555617 RABGGTBP53611 331 aa14.92□□□□□ -0.02
ABCD4-222ENST00000555617 CCDC152Q4G0S7 254 aa14.92□□□□□ -0.02
ABCD4-222ENST00000555617 NOL9Q5SY16 702 aaKnown RBP14.92□□□□□ -0.02
ABCD4-222ENST00000555617 USP6NLQ92738 828 aa14.92□□□□□ -0.02
ABCD4-222ENST00000555617 FERMT2Q96AC1 680 aa14.92□□□□□ -0.02
ABCD4-222ENST00000555617 MSRAQ9UJ68 235 aa14.92□□□□□ -0.02
ABCD4-222ENST00000555617 LOC285556D6RIA3 1793 aa14.92□□□□□ -0.02
ABCD4-222ENST00000555617 CLTBP09497 229 aa14.91□□□□□ -0.02
ABCD4-222ENST00000555617 TNNI2P48788 182 aa14.91□□□□□ -0.02
ABCD4-222ENST00000555617 RAB30Q15771 203 aa14.91□□□□□ -0.02
ABCD4-222ENST00000555617 GRIK5Q16478 980 aa14.91□□□□□ -0.02
ABCD4-222ENST00000555617 TRPV1Q8NER1 839 aa14.91□□□□□ -0.02
ABCD4-222ENST00000555617 FLRT1Q9NZU1 646 aa14.91□□□□□ -0.02
ABCD4-222ENST00000555617 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.91□□□□□ -0.02
ABCD4-222ENST00000555617 MYH3P11055 1940 aa14.9□□□□□ -0.02
ABCD4-222ENST00000555617 PRR23AA6NEV1 266 aa14.9□□□□□ -0.02
ABCD4-222ENST00000555617 FASTKD5Q7L8L6 764 aaKnown RBP14.9□□□□□ -0.02
ABCD4-222ENST00000555617 CEP250Q9BV73 2442 aa14.9□□□□□ -0.02
ABCD4-222ENST00000555617 ZFYVE26Q68DK2 2539 aa14.89□□□□□ -0.03
ABCD4-222ENST00000555617 ACRP10323 421 aa14.89□□□□□ -0.03
ABCD4-222ENST00000555617 ADCYAP1R1P41586 468 aa14.89□□□□□ -0.03
ABCD4-222ENST00000555617 FKBP1AP62942 108 aaKnown RBP14.89□□□□□ -0.03
ABCD4-222ENST00000555617 CCDC84Q86UT8 332 aaPredicted RBP14.89□□□□□ -0.03
ABCD4-222ENST00000555617 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.89□□□□□ -0.03
ABCD4-222ENST00000555617 RMDN1Q96DB5 314 aa14.89□□□□□ -0.03
ABCD4-222ENST00000555617 CERS4Q9HA82 394 aa14.89□□□□□ -0.03
ABCD4-222ENST00000555617 TTF2Q9UNY4 1162 aaKnown RBP14.89□□□□□ -0.03
ABCD4-222ENST00000555617 TRPC6Q9Y210 931 aa14.89□□□□□ -0.03
ABCD4-222ENST00000555617 LEMD3Q9Y2U8 911 aa14.89□□□□□ -0.03
ABCD4-222ENST00000555617 AFG3L2Q9Y4W6 797 aa14.89□□□□□ -0.03
ABCD4-222ENST00000555617 TACC3Q9Y6A5 838 aa14.89□□□□□ -0.03
ABCD4-222ENST00000555617 GAKO14976 1311 aa14.89□□□□□ -0.03
ABCD4-222ENST00000555617 CRKP46108 304 aa14.88□□□□□ -0.03
ABCD4-222ENST00000555617 ST3GAL2Q16842 350 aa14.88□□□□□ -0.03
ABCD4-222ENST00000555617 C1orf53Q5VUE5 145 aa14.88□□□□□ -0.03
ABCD4-222ENST00000555617 ANO1Q5XXA6 986 aa14.88□□□□□ -0.03
ABCD4-222ENST00000555617 PPP2R2DQ66LE6 453 aa14.88□□□□□ -0.03
ABCD4-222ENST00000555617 NUDT12Q9BQG2 462 aa14.88□□□□□ -0.03
ABCD4-222ENST00000555617 SERPINA10Q9UK55 444 aa14.88□□□□□ -0.03
ABCD4-222ENST00000555617 ZHX2Q9Y6X8 837 aa14.88□□□□□ -0.03
ABCD4-222ENST00000555617 DOCK1Q14185 1865 aa14.87□□□□□ -0.03
ABCD4-222ENST00000555617 PROB1E7EW31 1015 aa14.87□□□□□ -0.03
ABCD4-222ENST00000555617 DCAF15Q66K64 600 aa14.87□□□□□ -0.03
ABCD4-222ENST00000555617 ZNF365Q70YC5 407 aa14.87□□□□□ -0.03
ABCD4-222ENST00000555617 AGTPBP1Q9UPW5 1226 aa14.87□□□□□ -0.03
ABCD4-222ENST00000555617 EP300Q09472 2414 aaPredicted RBP14.87□□□□□ -0.03
ABCD4-222ENST00000555617 IL1R1P14778 569 aa14.86□□□□□ -0.03
ABCD4-222ENST00000555617 ATOH1Q92858 354 aaPredicted RBP14.86□□□□□ -0.03
ABCD4-222ENST00000555617 PDE8AO60658 829 aa14.85□□□□□ -0.03
ABCD4-222ENST00000555617 PQBP1O60828 265 aaKnown RBP14.85□□□□□ -0.03
ABCD4-222ENST00000555617 ARHGEF15O94989 841 aa14.85□□□□□ -0.03
ABCD4-222ENST00000555617 SLURP2P0DP57 97 aa14.85□□□□□ -0.03
ABCD4-222ENST00000555617 AMER1Q5JTC6 1135 aaPredicted RBP14.85□□□□□ -0.03
ABCD4-222ENST00000555617 PLBD2Q8NHP8 589 aa14.85□□□□□ -0.03
ABCD4-222ENST00000555617 GREM2Q9H772 168 aa14.85□□□□□ -0.03
ABCD4-222ENST00000555617 PTPRAP18433 802 aa14.84□□□□□ -0.03
ABCD4-222ENST00000555617 CNGA1P29973 690 aa14.84□□□□□ -0.03
ABCD4-222ENST00000555617 FAAP100Q0VG06 881 aa14.84□□□□□ -0.03
ABCD4-222ENST00000555617 DGLUCYQ7Z3D6 616 aa14.84□□□□□ -0.03
ABCD4-222ENST00000555617 SPRED2Q7Z698 418 aa14.84□□□□□ -0.03
ABCD4-222ENST00000555617 SOCS4Q8WXH5 440 aa14.84□□□□□ -0.03
ABCD4-222ENST00000555617 TXNRD2Q9NNW7 524 aa14.84□□□□□ -0.03
ABCD4-222ENST00000555617 TMEM39AQ9NV64 488 aa14.84□□□□□ -0.03
ABCD4-222ENST00000555617 TRIM75PA6NK02 468 aa14.83□□□□□ -0.04
ABCD4-222ENST00000555617 GTPBP6O43824 516 aaPredicted RBP14.83□□□□□ -0.04
ABCD4-222ENST00000555617 CSF2RAP15509 400 aa14.83□□□□□ -0.04
ABCD4-222ENST00000555617 MORN1Q5T089 497 aa14.83□□□□□ -0.04
ABCD4-222ENST00000555617 FAM83AQ86UY5 434 aa14.83□□□□□ -0.04
ABCD4-222ENST00000555617 DACH1Q9UI36 760 aa14.83□□□□□ -0.04
ABCD4-222ENST00000555617 DOCK2Q92608 1830 aa14.82□□□□□ -0.04
ABCD4-222ENST00000555617 KBTBD13C9JR72 458 aa14.82□□□□□ -0.04
ABCD4-222ENST00000555617 H0Y858 1186 aa14.82□□□□□ -0.04
ABCD4-222ENST00000555617 HTATSF1O43719 755 aaKnown RBP14.82□□□□□ -0.04
ABCD4-222ENST00000555617 MYCNP04198 464 aaPredicted RBP14.82□□□□□ -0.04
ABCD4-222ENST00000555617 VCPP55072 806 aaKnown RBP14.82□□□□□ -0.04
ABCD4-222ENST00000555617 TRIM28Q13263 835 aaKnown RBP14.82□□□□□ -0.04
ABCD4-222ENST00000555617 TRMT44Q8IYL2 757 aaKnown RBP14.82□□□□□ -0.04
ABCD4-222ENST00000555617 SLC44A5Q8NCS7 719 aa14.82□□□□□ -0.04
ABCD4-222ENST00000555617 CDC5LQ99459 802 aaKnown RBP14.82□□□□□ -0.04
ABCD4-222ENST00000555617 APBA2Q99767 749 aa14.82□□□□□ -0.04
ABCD4-222ENST00000555617 PORCNQ9H237 461 aa14.82□□□□□ -0.04
ABCD4-222ENST00000555617 UBE2ZQ9H832 354 aaPredicted RBP14.82□□□□□ -0.04
ABCD4-222ENST00000555617 TLR9Q9NR96 1032 aa14.82□□□□□ -0.04
ABCD4-222ENST00000555617 MORF4L1Q9UBU8 362 aa14.82□□□□□ -0.04
ABCD4-222ENST00000555617 PHF20L1A8MW92 1017 aa14.81□□□□□ -0.04
ABCD4-222ENST00000555617 LPXNO60711 386 aa14.81□□□□□ -0.04
ABCD4-222ENST00000555617 GCLCP48506 637 aaPredicted RBP14.81□□□□□ -0.04
ABCD4-222ENST00000555617 LEXMQ3ZCV2 418 aa14.81□□□□□ -0.04
ABCD4-222ENST00000555617 MFSD14BQ5SR56 506 aa14.81□□□□□ -0.04
ABCD4-222ENST00000555617 PNISRQ8TF01 805 aaKnown RBP14.81□□□□□ -0.04
ABCD4-222ENST00000555617 MUTYHQ9UIF7 546 aa14.81□□□□□ -0.04
ABCD4-222ENST00000555617 UTYO14607 1347 aa14.81□□□□□ -0.04
ABCD4-222ENST00000555617 ASH1LQ9NR48 2969 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms