RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 BTDP43251 543 aa10.45□□□□□ -0.74
NEK9-206ENST00000555537 GCLCP48506 637 aaPredicted RBP10.45□□□□□ -0.74
NEK9-206ENST00000555537 DZIP1Q86YF9 867 aaKnown RBP10.45□□□□□ -0.74
NEK9-206ENST00000555537 MRPL50Q8N5N7 158 aaKnown RBP10.45□□□□□ -0.74
NEK9-206ENST00000555537 PROCA1Q8NCQ7 364 aaPredicted RBP10.45□□□□□ -0.74
NEK9-206ENST00000555537 ZNF280CQ8ND82 737 aa10.45□□□□□ -0.74
NEK9-206ENST00000555537 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.45□□□□□ -0.74
NEK9-206ENST00000555537 CEP126Q9P2H0 1117 aa10.45□□□□□ -0.74
NEK9-206ENST00000555537 COL6A1P12109 1028 aa10.44□□□□□ -0.74
NEK9-206ENST00000555537 CCND3P30281 292 aaPredicted RBP10.44□□□□□ -0.74
NEK9-206ENST00000555537 TIMM10P62072 90 aa10.44□□□□□ -0.74
NEK9-206ENST00000555537 CACNB2Q08289 660 aaPredicted RBP10.44□□□□□ -0.74
NEK9-206ENST00000555537 CCL14Q16627 93 aa10.44□□□□□ -0.74
NEK9-206ENST00000555537 Q3C1V9 767 aa10.44□□□□□ -0.74
NEK9-206ENST00000555537 MAP3K21Q5TCX8 1036 aa10.44□□□□□ -0.74
NEK9-206ENST00000555537 CCDC102BQ68D86 513 aa10.44□□□□□ -0.74
NEK9-206ENST00000555537 LHX8Q68G74 356 aa10.44□□□□□ -0.74
NEK9-206ENST00000555537 P2RX7Q99572 595 aaKnown RBP10.44□□□□□ -0.74
NEK9-206ENST00000555537 TXNRD2Q9NNW7 524 aa10.44□□□□□ -0.74
NEK9-206ENST00000555537 MYH2Q9UKX2 1941 aa10.44□□□□□ -0.74
NEK9-206ENST00000555537 RFX7Q2KHR2 1363 aa10.43□□□□□ -0.74
NEK9-206ENST00000555537 DOCK1Q14185 1865 aa10.43□□□□□ -0.74
NEK9-206ENST00000555537 PLXNB2O15031 1838 aa10.43□□□□□ -0.74
NEK9-206ENST00000555537 TBC1D12O60347 775 aa10.43□□□□□ -0.74
NEK9-206ENST00000555537 RHBDL3P58872 404 aa10.43□□□□□ -0.74
NEK9-206ENST00000555537 ZNF384Q8TF68 577 aa10.43□□□□□ -0.74
NEK9-206ENST00000555537 FAM163AQ96GL9 167 aaPredicted RBP10.43□□□□□ -0.74
NEK9-206ENST00000555537 NUDT12Q9BQG2 462 aa10.43□□□□□ -0.74
NEK9-206ENST00000555537 OSBPL5Q9H0X9 879 aaPredicted RBP10.43□□□□□ -0.74
NEK9-206ENST00000555537 MRS2Q9HD23 443 aa10.43□□□□□ -0.74
NEK9-206ENST00000555537 PA2G4Q9UQ80 394 aaKnown RBP10.43□□□□□ -0.74
NEK9-206ENST00000555537 GPR75-ASB3A0A0A6YYF3 556 aa10.42□□□□□ -0.74
NEK9-206ENST00000555537 USP17L5A8MUK1 530 aa10.42□□□□□ -0.74
NEK9-206ENST00000555537 CAP2P40123 477 aa10.42□□□□□ -0.74
NEK9-206ENST00000555537 ATN1P54259 1190 aaPredicted RBP10.42□□□□□ -0.74
NEK9-206ENST00000555537 JAG1P78504 1218 aa10.42□□□□□ -0.74
NEK9-206ENST00000555537 MECOMQ03112 1051 aa10.42□□□□□ -0.74
NEK9-206ENST00000555537 PABPC4Q13310 644 aaKnown RBP eCLIP10.42□□□□□ -0.74
NEK9-206ENST00000555537 RASGRF1Q13972 1273 aa10.42□□□□□ -0.74
NEK9-206ENST00000555537 SHROOM1Q2M3G4 852 aaPredicted RBP10.42□□□□□ -0.74
NEK9-206ENST00000555537 ZGPATQ8N5A5 531 aaKnown RBP10.42□□□□□ -0.74
NEK9-206ENST00000555537 SENP6Q9GZR1 1112 aaPredicted RBP10.42□□□□□ -0.74
NEK9-206ENST00000555537 RBPJLQ9UBG7 517 aa10.42□□□□□ -0.74
NEK9-206ENST00000555537 MORF4L1Q9UBU8 362 aa10.42□□□□□ -0.74
NEK9-206ENST00000555537 EYSQ5T1H1 3165 aa10.41□□□□□ -0.74
NEK9-206ENST00000555537 MROH7-TTC4A0A0A0MT08 1334 aa10.41□□□□□ -0.74
NEK9-206ENST00000555537 SEMA3EO15041 775 aa10.41□□□□□ -0.74
NEK9-206ENST00000555537 ZKSCAN1P17029 563 aaPredicted RBP10.41□□□□□ -0.74
NEK9-206ENST00000555537 IRX3P78415 501 aaPredicted RBP10.41□□□□□ -0.74
NEK9-206ENST00000555537 MTMR2Q13614 643 aa10.41□□□□□ -0.74
NEK9-206ENST00000555537 SH3D19Q5HYK7 790 aa10.41□□□□□ -0.74
NEK9-206ENST00000555537 FAM109BQ6ICB4 259 aaPredicted RBP10.41□□□□□ -0.74
NEK9-206ENST00000555537 POTEEQ6S8J3 1075 aa10.41□□□□□ -0.74
NEK9-206ENST00000555537 TBC1D9Q6ZT07 1266 aa10.41□□□□□ -0.74
NEK9-206ENST00000555537 SLF2Q8IX21 1173 aa10.41□□□□□ -0.74
NEK9-206ENST00000555537 GPRC5AQ8NFJ5 357 aa10.41□□□□□ -0.74
NEK9-206ENST00000555537 CDX2Q99626 313 aaPredicted RBP10.41□□□□□ -0.74
NEK9-206ENST00000555537 PORCNQ9H237 461 aa10.41□□□□□ -0.74
NEK9-206ENST00000555537 NDUFB9Q9Y6M9 179 aa10.41□□□□□ -0.74
NEK9-206ENST00000555537 VCANP13611 3396 aa10.4□□□□□ -0.74
NEK9-206ENST00000555537 CIAO1O76071 339 aa10.4□□□□□ -0.74
NEK9-206ENST00000555537 XRCC5P13010 732 aaKnown RBP10.4□□□□□ -0.74
NEK9-206ENST00000555537 HERVK_113P62684 666 aa10.4□□□□□ -0.74
NEK9-206ENST00000555537 ERICH6Q7L0X2 663 aa10.4□□□□□ -0.74
NEK9-206ENST00000555537 SSH1Q8WYL5 1049 aa10.4□□□□□ -0.74
NEK9-206ENST00000555537 USP6NLQ92738 828 aa10.4□□□□□ -0.74
NEK9-206ENST00000555537 LBHD1Q9BQE6 289 aaPredicted RBP10.4□□□□□ -0.74
NEK9-206ENST00000555537 PAGR1Q9BTK6 254 aa10.4□□□□□ -0.74
NEK9-206ENST00000555537 SEMA6BQ9H3T3 888 aa10.4□□□□□ -0.74
NEK9-206ENST00000555537 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.4□□□□□ -0.74
NEK9-206ENST00000555537 HOXA7P31268 230 aaPredicted RBP10.39□□□□□ -0.75
NEK9-206ENST00000555537 IL15P40933 162 aaPredicted RBP10.39□□□□□ -0.75
NEK9-206ENST00000555537 BACE1P56817 501 aa10.39□□□□□ -0.75
NEK9-206ENST00000555537 SHHQ15465 462 aa10.39□□□□□ -0.75
NEK9-206ENST00000555537 MORN1Q5T089 497 aa10.39□□□□□ -0.75
NEK9-206ENST00000555537 ZNF697Q5TEC3 545 aa10.39□□□□□ -0.75
NEK9-206ENST00000555537 SPTY2D1Q68D10 685 aaPredicted RBP10.39□□□□□ -0.75
NEK9-206ENST00000555537 PI16Q6UXB8 463 aa10.39□□□□□ -0.75
NEK9-206ENST00000555537 GPR142Q7Z601 462 aa10.39□□□□□ -0.75
NEK9-206ENST00000555537 CCAR1Q8IX12 1150 aaKnown RBP10.39□□□□□ -0.75
NEK9-206ENST00000555537 XAGE2Q96GT9 111 aa10.39□□□□□ -0.75
NEK9-206ENST00000555537 AS3MTQ9HBK9 375 aa10.39□□□□□ -0.75
NEK9-206ENST00000555537 PRDM6Q9NQX0 595 aa10.39□□□□□ -0.75
NEK9-206ENST00000555537 TMOD4Q9NZQ9 345 aa10.39□□□□□ -0.75
NEK9-206ENST00000555537 FLRT1Q9NZU1 646 aa10.39□□□□□ -0.75
NEK9-206ENST00000555537 LOC285556D6RIA3 1793 aa10.39□□□□□ -0.75
NEK9-206ENST00000555537 PTPRCP08575 1304 aa10.38□□□□□ -0.75
NEK9-206ENST00000555537 A0A1B0GUL7 405 aa10.38□□□□□ -0.75
NEK9-206ENST00000555537 NPM3O75607 178 aaKnown RBP10.38□□□□□ -0.75
NEK9-206ENST00000555537 CNGA1P29973 690 aa10.38□□□□□ -0.75
NEK9-206ENST00000555537 MAPK4P31152 587 aa10.38□□□□□ -0.75
NEK9-206ENST00000555537 RGS2P41220 211 aa10.38□□□□□ -0.75
NEK9-206ENST00000555537 ERVK-9P63128 1117 aa10.38□□□□□ -0.75
NEK9-206ENST00000555537 ERVK-24P63145 666 aa10.38□□□□□ -0.75
NEK9-206ENST00000555537 PDE3AQ14432 1141 aa10.38□□□□□ -0.75
NEK9-206ENST00000555537 C9orf50Q5SZB4 431 aa10.38□□□□□ -0.75
NEK9-206ENST00000555537 PLEKHH3Q7Z736 793 aa10.38□□□□□ -0.75
NEK9-206ENST00000555537 FAM9BQ8IZU0 186 aa10.38□□□□□ -0.75
NEK9-206ENST00000555537 MAFAQ8NHW3 353 aaPredicted RBP10.38□□□□□ -0.75
NEK9-206ENST00000555537 SH3RF3Q8TEJ3 882 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms