RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 MIR1-1HGQ9H1L0 117 aa8.25□□□□□ -1.09
ATXN3-225ENST00000554214 PRAMEF27A3QJZ7 478 aa8.24□□□□□ -1.09
ATXN3-225ENST00000554214 ADAMTS4O75173 837 aa8.24□□□□□ -1.09
ATXN3-225ENST00000554214 MFAP1P55081 439 aaKnown RBP8.24□□□□□ -1.09
ATXN3-225ENST00000554214 UBE3DQ7Z6J8 389 aa8.24□□□□□ -1.09
ATXN3-225ENST00000554214 RELL1Q8IUW5 271 aa8.24□□□□□ -1.09
ATXN3-225ENST00000554214 KCT2Q8NC54 265 aa8.24□□□□□ -1.09
ATXN3-225ENST00000554214 F6X3S4 739 aa8.23□□□□□ -1.09
ATXN3-225ENST00000554214 WNT11O96014 354 aa8.23□□□□□ -1.09
ATXN3-225ENST00000554214 MSMPQ1L6U9 139 aa8.23□□□□□ -1.09
ATXN3-225ENST00000554214 WIPI1Q5MNZ9 446 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-225ENST00000554214 TOP6BLQ8N6T0 577 aa8.23□□□□□ -1.09
ATXN3-225ENST00000554214 PHC3Q8NDX5 983 aa8.23□□□□□ -1.09
ATXN3-225ENST00000554214 WNT10AQ9GZT5 417 aa8.23□□□□□ -1.09
ATXN3-225ENST00000554214 ZC3H7BQ9UGR2 993 aaKnown RBP8.23□□□□□ -1.09
ATXN3-225ENST00000554214 GFRA2O00451 464 aa8.22□□□□□ -1.09
ATXN3-225ENST00000554214 ETF1P62495 437 aaKnown RBP8.22□□□□□ -1.09
ATXN3-225ENST00000554214 TSNAXIP1Q2TAA8 658 aa8.22□□□□□ -1.09
ATXN3-225ENST00000554214 TRIM26Q12899 539 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-225ENST00000554214 RSRP1Q9BUV0 290 aa8.21□□□□□ -1.1
ATXN3-225ENST00000554214 BCL11AQ9H165 835 aa8.21□□□□□ -1.1
ATXN3-225ENST00000554214 PRDM10Q9NQV6 1147 aa8.21□□□□□ -1.1
ATXN3-225ENST00000554214 BSDC1Q9NW68 430 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-225ENST00000554214 MINDY4BA8MYZ0 360 aa8.2□□□□□ -1.1
ATXN3-225ENST00000554214 PF4P02776 101 aa8.2□□□□□ -1.1
ATXN3-225ENST00000554214 ZNF16P17020 682 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-225ENST00000554214 GBP2P32456 591 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-225ENST00000554214 CAMK2GQ13555 558 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-225ENST00000554214 FAM181AQ8N9Y4 354 aa8.2□□□□□ -1.1
ATXN3-225ENST00000554214 FBRSQ9HAH7 460 aa8.2□□□□□ -1.1
ATXN3-225ENST00000554214 CCDC39Q9UFE4 941 aa8.2□□□□□ -1.1
ATXN3-225ENST00000554214 LRIG2O94898 1065 aa8.19□□□□□ -1.1
ATXN3-225ENST00000554214 GRK4P32298 578 aa8.19□□□□□ -1.1
ATXN3-225ENST00000554214 GP2P55259 537 aaKnown RBP8.19□□□□□ -1.1
ATXN3-225ENST00000554214 LMNB2Q03252 620 aa8.19□□□□□ -1.1
ATXN3-225ENST00000554214 MRPL58Q14197 206 aaKnown RBP8.19□□□□□ -1.1
ATXN3-225ENST00000554214 DIEXFQ68CQ4 756 aaKnown RBP8.19□□□□□ -1.1
ATXN3-225ENST00000554214 CCDC84Q86UT8 332 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-225ENST00000554214 HID1Q8IV36 788 aa8.19□□□□□ -1.1
ATXN3-225ENST00000554214 TMEM74Q96NL1 305 aa8.19□□□□□ -1.1
ATXN3-225ENST00000554214 ANGEL1Q9UNK9 670 aaKnown RBP8.19□□□□□ -1.1
ATXN3-225ENST00000554214 PRNPP04156 253 aa8.18□□□□□ -1.1
ATXN3-225ENST00000554214 RPL6Q02878 288 aaKnown RBP8.18□□□□□ -1.1
ATXN3-225ENST00000554214 PWP1Q13610 501 aa8.18□□□□□ -1.1
ATXN3-225ENST00000554214 SLBPQ14493 270 aaKnown RBP eCLIP8.18□□□□□ -1.1
ATXN3-225ENST00000554214 NKG7Q16617 165 aa8.18□□□□□ -1.1
ATXN3-225ENST00000554214 BNC2Q6ZN30 1099 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-225ENST00000554214 ARHGAP27Q6ZUM4 889 aa8.18□□□□□ -1.1
ATXN3-225ENST00000554214 ARMCX6Q7L4S7 300 aa8.18□□□□□ -1.1
ATXN3-225ENST00000554214 FAM214BQ7L5A3 538 aa8.18□□□□□ -1.1
ATXN3-225ENST00000554214 FOXQ1Q9C009 403 aa8.18□□□□□ -1.1
ATXN3-225ENST00000554214 TACC3Q9Y6A5 838 aa8.18□□□□□ -1.1
ATXN3-225ENST00000554214 OAS3Q9Y6K5 1087 aaKnown RBP8.18□□□□□ -1.1
ATXN3-225ENST00000554214 HEXIM2Q96MH2 286 aaKnown RBP8.17□□□□□ -1.1
ATXN3-225ENST00000554214 OXCT1P55809 520 aa8.16□□□□□ -1.1
ATXN3-225ENST00000554214 PLD6Q8N2A8 252 aaKnown RBP8.16□□□□□ -1.1
ATXN3-225ENST00000554214 NETO1Q8TDF5 533 aa8.16□□□□□ -1.1
ATXN3-225ENST00000554214 COPRSQ9NQ92 184 aa8.16□□□□□ -1.1
ATXN3-225ENST00000554214 GTF2IRD1Q9UHL9 959 aa8.16□□□□□ -1.1
ATXN3-225ENST00000554214 FAM221AA4D161 298 aa8.15□□□□□ -1.1
ATXN3-225ENST00000554214 BPNT1O95861 308 aa8.15□□□□□ -1.1
ATXN3-225ENST00000554214 EOMESO95936 686 aa8.15□□□□□ -1.1
ATXN3-225ENST00000554214 F13A1P00488 732 aa8.15□□□□□ -1.1
ATXN3-225ENST00000554214 PGRP06401 933 aa8.15□□□□□ -1.1
ATXN3-225ENST00000554214 CAP2P40123 477 aa8.15□□□□□ -1.1
ATXN3-225ENST00000554214 FAM160A1Q05DH4 1040 aa8.15□□□□□ -1.1
ATXN3-225ENST00000554214 PDE4BQ07343 736 aa8.15□□□□□ -1.1
ATXN3-225ENST00000554214 VSIG10LQ86VR7 867 aa8.15□□□□□ -1.1
ATXN3-225ENST00000554214 MFSD2AQ8NA29 543 aa8.15□□□□□ -1.1
ATXN3-225ENST00000554214 GATAD2BQ8WXI9 593 aa8.15□□□□□ -1.1
ATXN3-225ENST00000554214 RHOVQ96L33 236 aa8.15□□□□□ -1.1
ATXN3-225ENST00000554214 FBXL18Q96ME1 805 aa8.15□□□□□ -1.1
ATXN3-225ENST00000554214 MKNK2Q9HBH9 465 aa8.15□□□□□ -1.1
ATXN3-225ENST00000554214 KBTBD4Q9NVX7 518 aa8.15□□□□□ -1.1
ATXN3-225ENST00000554214 U3KQE9 123 aa8.15□□□□□ -1.1
ATXN3-225ENST00000554214 IGF2BP3O00425 579 aaKnown RBP eCLIP8.14□□□□□ -1.11
ATXN3-225ENST00000554214 CILPO75339 1184 aa8.14□□□□□ -1.11
ATXN3-225ENST00000554214 SLITRK5O94991 958 aa8.14□□□□□ -1.11
ATXN3-225ENST00000554214 CST3P01034 146 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-225ENST00000554214 BNIP3Q12983 259 aa8.14□□□□□ -1.11
ATXN3-225ENST00000554214 ERMP1Q7Z2K6 904 aa8.14□□□□□ -1.11
ATXN3-225ENST00000554214 TP53INP2Q8IXH6 220 aa8.14□□□□□ -1.11
ATXN3-225ENST00000554214 GOLM1Q8NBJ4 401 aa8.14□□□□□ -1.11
ATXN3-225ENST00000554214 TMEM87AQ8NBN3 555 aa8.14□□□□□ -1.11
ATXN3-225ENST00000554214 RIN3Q8TB24 985 aa8.14□□□□□ -1.11
ATXN3-225ENST00000554214 XAGE3Q8WTP9 111 aa8.14□□□□□ -1.11
ATXN3-225ENST00000554214 TJP2Q9UDY2 1190 aa8.14□□□□□ -1.11
ATXN3-225ENST00000554214 GGT7Q9UJ14 662 aa8.14□□□□□ -1.11
ATXN3-225ENST00000554214 PLAGL2Q9UPG8 496 aa8.14□□□□□ -1.11
ATXN3-225ENST00000554214 SLC5A6Q9Y289 635 aa8.14□□□□□ -1.11
ATXN3-225ENST00000554214 SNAP47Q5SQN1 464 aa8.13□□□□□ -1.11
ATXN3-225ENST00000554214 PRAMEF13Q5VWM6 474 aa8.13□□□□□ -1.11
ATXN3-225ENST00000554214 NFXL1Q6ZNB6 911 aa8.13□□□□□ -1.11
ATXN3-225ENST00000554214 FLCNQ8NFG4 579 aa8.13□□□□□ -1.11
ATXN3-225ENST00000554214 BCL7CQ8WUZ0 217 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-225ENST00000554214 MIPEPQ99797 713 aa8.13□□□□□ -1.11
ATXN3-225ENST00000554214 CORINQ9Y5Q5 1042 aa8.13□□□□□ -1.11
ATXN3-225ENST00000554214 RBM47A0AV96 593 aaKnown RBP8.12□□□□□ -1.11
ATXN3-225ENST00000554214 ITIH2P19823 946 aa8.12□□□□□ -1.11
ATXN3-225ENST00000554214 IFI16Q16666 785 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms