RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 IFIT1P09914 478 aaKnown RBP11.41□□□□□ -0.58
PRKCH-208ENST00000553846 LHX8Q68G74 356 aa11.41□□□□□ -0.58
PRKCH-208ENST00000553846 PROCA1Q8NCQ7 364 aaPredicted RBP11.41□□□□□ -0.58
PRKCH-208ENST00000553846 ZNF384Q8TF68 577 aa11.41□□□□□ -0.58
PRKCH-208ENST00000553846 USP6NLQ92738 828 aa11.41□□□□□ -0.58
PRKCH-208ENST00000553846 PRDM6Q9NQX0 595 aa11.41□□□□□ -0.58
PRKCH-208ENST00000553846 TBC1D12O60347 775 aa11.4□□□□□ -0.58
PRKCH-208ENST00000553846 GCLCP48506 637 aaPredicted RBP11.4□□□□□ -0.58
PRKCH-208ENST00000553846 RRP1BQ14684 758 aaKnown RBP11.4□□□□□ -0.58
PRKCH-208ENST00000553846 POTEEQ6S8J3 1075 aa11.4□□□□□ -0.58
PRKCH-208ENST00000553846 WDR63Q8IWG1 891 aa11.4□□□□□ -0.58
PRKCH-208ENST00000553846 LPIN2Q92539 896 aa11.4□□□□□ -0.58
PRKCH-208ENST00000553846 TAOK2Q9UL54 1235 aa11.4□□□□□ -0.58
PRKCH-208ENST00000553846 BDP1A6H8Y1 2624 aa11.39□□□□□ -0.59
PRKCH-208ENST00000553846 XRCC5P13010 732 aaKnown RBP11.39□□□□□ -0.59
PRKCH-208ENST00000553846 PRKAR2AP13861 404 aaKnown RBP11.39□□□□□ -0.59
PRKCH-208ENST00000553846 RHBDL3P58872 404 aa11.39□□□□□ -0.59
PRKCH-208ENST00000553846 SH3D19Q5HYK7 790 aa11.39□□□□□ -0.59
PRKCH-208ENST00000553846 FAM163AQ96GL9 167 aaPredicted RBP11.39□□□□□ -0.59
PRKCH-208ENST00000553846 ASCC2Q9H1I8 757 aaPredicted RBP11.39□□□□□ -0.59
PRKCH-208ENST00000553846 PNMA3Q9UL41 463 aa11.39□□□□□ -0.59
PRKCH-208ENST00000553846 RLFQ13129 1914 aa11.39□□□□□ -0.59
PRKCH-208ENST00000553846 NCOR1O75376 2440 aa11.38□□□□□ -0.59
PRKCH-208ENST00000553846 XIRP2A4UGR9 3374 aa11.38□□□□□ -0.59
PRKCH-208ENST00000553846 EYA2O00167 538 aa11.38□□□□□ -0.59
PRKCH-208ENST00000553846 PEX10O60683 326 aa11.38□□□□□ -0.59
PRKCH-208ENST00000553846 NPM3O75607 178 aaKnown RBP11.38□□□□□ -0.59
PRKCH-208ENST00000553846 LDHBP07195 334 aaKnown RBP11.38□□□□□ -0.59
PRKCH-208ENST00000553846 SLC5A1P13866 664 aa11.38□□□□□ -0.59
PRKCH-208ENST00000553846 MDM2Q00987 491 aaPredicted RBP11.38□□□□□ -0.59
PRKCH-208ENST00000553846 SLC4A10Q6U841 1118 aa11.38□□□□□ -0.59
PRKCH-208ENST00000553846 USP44Q9H0E7 712 aa11.38□□□□□ -0.59
PRKCH-208ENST00000553846 TXNRD2Q9NNW7 524 aa11.38□□□□□ -0.59
PRKCH-208ENST00000553846 REV3LO60673 3130 aa11.38□□□□□ -0.59
PRKCH-208ENST00000553846 CHD7Q9P2D1 2997 aa11.37□□□□□ -0.59
PRKCH-208ENST00000553846 PDS5AQ29RF7 1337 aaKnown RBP11.37□□□□□ -0.59
PRKCH-208ENST00000553846 FAM196BA6NMK8 535 aa11.37□□□□□ -0.59
PRKCH-208ENST00000553846 SEMA3EO15041 775 aa11.37□□□□□ -0.59
PRKCH-208ENST00000553846 IGHA2P01877 340 aa11.37□□□□□ -0.59
PRKCH-208ENST00000553846 PHKA1P46020 1223 aa11.37□□□□□ -0.59
PRKCH-208ENST00000553846 CACNB2Q08289 660 aaPredicted RBP11.37□□□□□ -0.59
PRKCH-208ENST00000553846 SPP2Q13103 211 aa11.37□□□□□ -0.59
PRKCH-208ENST00000553846 ZNF280CQ8ND82 737 aa11.37□□□□□ -0.59
PRKCH-208ENST00000553846 LRRFIP2Q9Y608 721 aaKnown RBP11.37□□□□□ -0.59
PRKCH-208ENST00000553846 CCND3P30281 292 aaPredicted RBP11.36□□□□□ -0.59
PRKCH-208ENST00000553846 HMGCS2P54868 508 aa11.36□□□□□ -0.59
PRKCH-208ENST00000553846 MORN1Q5T089 497 aa11.36□□□□□ -0.59
PRKCH-208ENST00000553846 SOCS4Q8WXH5 440 aa11.36□□□□□ -0.59
PRKCH-208ENST00000553846 CDX2Q99626 313 aaPredicted RBP11.36□□□□□ -0.59
PRKCH-208ENST00000553846 OSBPL5Q9H0X9 879 aaPredicted RBP11.36□□□□□ -0.59
PRKCH-208ENST00000553846 CDK5RAP2Q96SN8 1893 aa11.36□□□□□ -0.59
PRKCH-208ENST00000553846 MROH7-TTC4A0A0A0MT08 1334 aa11.35□□□□□ -0.59
PRKCH-208ENST00000553846 FOCADQ5VW36 1801 aa11.35□□□□□ -0.59
PRKCH-208ENST00000553846 GPR75-ASB3A0A0A6YYF3 556 aa11.35□□□□□ -0.59
PRKCH-208ENST00000553846 CIAO1O76071 339 aa11.35□□□□□ -0.59
PRKCH-208ENST00000553846 CYP2B6P20813 491 aa11.35□□□□□ -0.59
PRKCH-208ENST00000553846 HOXA7P31268 230 aaPredicted RBP11.35□□□□□ -0.59
PRKCH-208ENST00000553846 JAG1P78504 1218 aa11.35□□□□□ -0.59
PRKCH-208ENST00000553846 RASGRF1Q13972 1273 aa11.35□□□□□ -0.59
PRKCH-208ENST00000553846 CCL14Q16627 93 aa11.35□□□□□ -0.59
PRKCH-208ENST00000553846 ATP2B3Q16720 1220 aa11.35□□□□□ -0.59
PRKCH-208ENST00000553846 MAFAQ8NHW3 353 aaPredicted RBP11.35□□□□□ -0.59
PRKCH-208ENST00000553846 FAM161BQ96MY7 647 aa11.35□□□□□ -0.59
PRKCH-208ENST00000553846 TBC1D2Q9BYX2 928 aa11.35□□□□□ -0.59
PRKCH-208ENST00000553846 TTYH1Q9H313 450 aaPredicted RBP11.35□□□□□ -0.59
PRKCH-208ENST00000553846 DENND2AQ9ULE3 1009 aa11.35□□□□□ -0.59
PRKCH-208ENST00000553846 ADORA1P30542 326 aa11.34□□□□□ -0.59
PRKCH-208ENST00000553846 CAP2P40123 477 aa11.34□□□□□ -0.59
PRKCH-208ENST00000553846 BTDP43251 543 aa11.34□□□□□ -0.59
PRKCH-208ENST00000553846 WDR18Q9BV38 432 aa11.34□□□□□ -0.59
PRKCH-208ENST00000553846 PORCNQ9H237 461 aa11.34□□□□□ -0.59
PRKCH-208ENST00000553846 DNAJC18Q9H819 358 aa11.34□□□□□ -0.59
PRKCH-208ENST00000553846 RBPJLQ9UBG7 517 aa11.34□□□□□ -0.59
PRKCH-208ENST00000553846 FBXO3Q9UK99 471 aa11.34□□□□□ -0.59
PRKCH-208ENST00000553846 ZNF236Q9UL36 1845 aa11.33□□□□□ -0.6
PRKCH-208ENST00000553846 ZKSCAN1P17029 563 aaPredicted RBP11.33□□□□□ -0.6
PRKCH-208ENST00000553846 HERVK_113P62684 666 aa11.33□□□□□ -0.6
PRKCH-208ENST00000553846 PABPC4Q13310 644 aaKnown RBP eCLIP11.33□□□□□ -0.6
PRKCH-208ENST00000553846 PICALMQ13492 652 aa11.33□□□□□ -0.6
PRKCH-208ENST00000553846 C9orf50Q5SZB4 431 aa11.33□□□□□ -0.6
PRKCH-208ENST00000553846 ZNF697Q5TEC3 545 aa11.33□□□□□ -0.6
PRKCH-208ENST00000553846 CCDC102BQ68D86 513 aa11.33□□□□□ -0.6
PRKCH-208ENST00000553846 METTL16Q86W50 562 aaKnown RBP11.33□□□□□ -0.6
PRKCH-208ENST00000553846 ZSCAN29Q8IWY8 852 aaPredicted RBP11.33□□□□□ -0.6
PRKCH-208ENST00000553846 TRMT44Q8IYL2 757 aaKnown RBP11.33□□□□□ -0.6
PRKCH-208ENST00000553846 MRPL50Q8N5N7 158 aaKnown RBP11.33□□□□□ -0.6
PRKCH-208ENST00000553846 P2RX7Q99572 595 aaKnown RBP11.33□□□□□ -0.6
PRKCH-208ENST00000553846 APBA2Q99767 749 aa11.33□□□□□ -0.6
PRKCH-208ENST00000553846 NUDT12Q9BQG2 462 aa11.33□□□□□ -0.6
PRKCH-208ENST00000553846 SEMA6BQ9H3T3 888 aa11.33□□□□□ -0.6
PRKCH-208ENST00000553846 FLRT1Q9NZU1 646 aa11.33□□□□□ -0.6
PRKCH-208ENST00000553846 USP17L5A8MUK1 530 aa11.32□□□□□ -0.6
PRKCH-208ENST00000553846 MAPK4P31152 587 aa11.32□□□□□ -0.6
PRKCH-208ENST00000553846 ZEB1P37275 1124 aaPredicted RBP11.32□□□□□ -0.6
PRKCH-208ENST00000553846 BACE1P56817 501 aa11.32□□□□□ -0.6
PRKCH-208ENST00000553846 MECOMQ03112 1051 aa11.32□□□□□ -0.6
PRKCH-208ENST00000553846 MTMR2Q13614 643 aa11.32□□□□□ -0.6
PRKCH-208ENST00000553846 SHROOM1Q2M3G4 852 aaPredicted RBP11.32□□□□□ -0.6
PRKCH-208ENST00000553846 Q3C1V9 767 aa11.32□□□□□ -0.6
PRKCH-208ENST00000553846 GPR142Q7Z601 462 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms