RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 MAP3K5Q99683 1374 aa8.85□□□□□ -0.99
ATXN3-223ENST00000553686 KCNA1Q09470 495 aa8.84□□□□□ -0.99
ATXN3-223ENST00000553686 MBTPS1Q14703 1052 aa8.84□□□□□ -0.99
ATXN3-223ENST00000553686 SLC15A2Q16348 729 aa8.84□□□□□ -0.99
ATXN3-223ENST00000553686 TXNDC11Q6PKC3 985 aa8.84□□□□□ -0.99
ATXN3-223ENST00000553686 NALCNQ8IZF0 1738 aa8.84□□□□□ -0.99
ATXN3-223ENST00000553686 TMEM102Q8N9M5 508 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-223ENST00000553686 NXPE3Q969Y0 559 aa8.84□□□□□ -0.99
ATXN3-223ENST00000553686 FAM129BQ96TA1 746 aa8.84□□□□□ -0.99
ATXN3-223ENST00000553686 ZKSCAN3Q9BRR0 538 aa8.84□□□□□ -0.99
ATXN3-223ENST00000553686 SRA1Q9HD15 236 aaKnown RBP8.84□□□□□ -0.99
ATXN3-223ENST00000553686 STK26Q9P289 416 aa8.84□□□□□ -0.99
ATXN3-223ENST00000553686 FURINP09958 794 aa8.83□□□□□ -1
ATXN3-223ENST00000553686 FAM117BQ6P1L5 589 aa8.83□□□□□ -1
ATXN3-223ENST00000553686 TCP11L2Q8N4U5 519 aa8.83□□□□□ -1
ATXN3-223ENST00000553686 NIF3L1Q9GZT8 377 aa8.83□□□□□ -1
ATXN3-223ENST00000553686 LATS2Q9NRM7 1088 aa8.83□□□□□ -1
ATXN3-223ENST00000553686 THRAP3Q9Y2W1 955 aaKnown RBP8.83□□□□□ -1
ATXN3-223ENST00000553686 IVNS1ABPQ9Y6Y0 642 aa8.83□□□□□ -1
ATXN3-223ENST00000553686 NRXN3Q9Y4C0 1643 aa8.83□□□□□ -1
ATXN3-223ENST00000553686 MARF1Q9Y4F3 1742 aaKnown RBP8.83□□□□□ -1
ATXN3-223ENST00000553686 EPHA1P21709 976 aa8.82□□□□□ -1
ATXN3-223ENST00000553686 FAM50AQ14320 339 aaKnown RBP8.82□□□□□ -1
ATXN3-223ENST00000553686 PEAR1Q5VY43 1037 aaPredicted RBP8.82□□□□□ -1
ATXN3-223ENST00000553686 USPL1Q5W0Q7 1092 aa8.82□□□□□ -1
ATXN3-223ENST00000553686 RBCK1Q9BYM8 510 aa8.82□□□□□ -1
ATXN3-223ENST00000553686 CDC42BPGQ6DT37 1551 aa8.82□□□□□ -1
ATXN3-223ENST00000553686 CAMTA1Q9Y6Y1 1673 aa8.81□□□□□ -1
ATXN3-223ENST00000553686 NEXMIFQ5QGS0 1516 aa8.81□□□□□ -1
ATXN3-223ENST00000553686 NWD2Q9ULI1 1742 aa8.81□□□□□ -1
ATXN3-223ENST00000553686 FSCN2O14926 492 aa8.81□□□□□ -1
ATXN3-223ENST00000553686 POLD1P28340 1107 aa8.81□□□□□ -1
ATXN3-223ENST00000553686 CABP4P57796 275 aa8.81□□□□□ -1
ATXN3-223ENST00000553686 ORC1Q13415 861 aa8.81□□□□□ -1
ATXN3-223ENST00000553686 TXNRD3Q86VQ6 643 aa8.81□□□□□ -1
ATXN3-223ENST00000553686 GALNT12Q8IXK2 581 aa8.81□□□□□ -1
ATXN3-223ENST00000553686 GALNT11Q8NCW6 608 aa8.81□□□□□ -1
ATXN3-223ENST00000553686 DCAF11Q8TEB1 546 aa8.81□□□□□ -1
ATXN3-223ENST00000553686 WFDC12Q8WWY7 111 aa8.81□□□□□ -1
ATXN3-223ENST00000553686 GPRASP1Q5JY77 1395 aa8.81□□□□□ -1
ATXN3-223ENST00000553686 DLC1Q96QB1 1528 aa8.8□□□□□ -1
ATXN3-223ENST00000553686 CPNE3O75131 537 aaKnown RBP8.8□□□□□ -1
ATXN3-223ENST00000553686 IREB2P48200 963 aaKnown RBP8.8□□□□□ -1
ATXN3-223ENST00000553686 DNAJC5GQ8N7S2 189 aa8.8□□□□□ -1
ATXN3-223ENST00000553686 PMFBP1Q8TBY8 1022 aa8.8□□□□□ -1
ATXN3-223ENST00000553686 ASAP3Q8TDY4 903 aa8.8□□□□□ -1
ATXN3-223ENST00000553686 CARD10Q9BWT7 1032 aa8.8□□□□□ -1
ATXN3-223ENST00000553686 TPSG1Q9NRR2 321 aa8.8□□□□□ -1
ATXN3-223ENST00000553686 DCTN4Q9UJW0 460 aa8.8□□□□□ -1
ATXN3-223ENST00000553686 NRKQ7Z2Y5 1582 aa8.8□□□□□ -1
ATXN3-223ENST00000553686 ABCC11Q96J66 1382 aa8.79□□□□□ -1
ATXN3-223ENST00000553686 A0A1W2PP55 124 aa8.79□□□□□ -1
ATXN3-223ENST00000553686 GPR182O15218 404 aa8.79□□□□□ -1
ATXN3-223ENST00000553686 IGHA2P01877 340 aa8.79□□□□□ -1
ATXN3-223ENST00000553686 CD68P34810 354 aaPredicted RBP8.79□□□□□ -1
ATXN3-223ENST00000553686 CHRNA2Q15822 529 aa8.79□□□□□ -1
ATXN3-223ENST00000553686 TXNRD1Q16881 649 aa8.79□□□□□ -1
ATXN3-223ENST00000553686 KLHL23Q8NBE8 558 aa8.79□□□□□ -1
ATXN3-223ENST00000553686 BSNDQ8WZ55 320 aa8.79□□□□□ -1
ATXN3-223ENST00000553686 DMRTB1Q96MA1 342 aa8.79□□□□□ -1
ATXN3-223ENST00000553686 MRPL18Q9H0U6 180 aaKnown RBP8.79□□□□□ -1
ATXN3-223ENST00000553686 MYO5BQ9ULV0 1848 aa8.79□□□□□ -1
ATXN3-223ENST00000553686 H3BRJ5 948 aa8.78□□□□□ -1
ATXN3-223ENST00000553686 EIF1AYO14602 144 aaKnown RBP8.78□□□□□ -1
ATXN3-223ENST00000553686 ALX3O95076 343 aa8.78□□□□□ -1
ATXN3-223ENST00000553686 PDIA4P13667 645 aaKnown RBP8.78□□□□□ -1
ATXN3-223ENST00000553686 NOS3P29474 1203 aa8.78□□□□□ -1
ATXN3-223ENST00000553686 TMC7Q7Z402 723 aa8.78□□□□□ -1
ATXN3-223ENST00000553686 TMEM130Q8N3G9 435 aa8.78□□□□□ -1
ATXN3-223ENST00000553686 KLHDC7BQ96G42 594 aa8.78□□□□□ -1
ATXN3-223ENST00000553686 SEC31BQ9NQW1 1179 aa8.78□□□□□ -1
ATXN3-223ENST00000553686 SOX13Q9UN79 622 aa8.78□□□□□ -1
ATXN3-223ENST00000553686 ATP10DQ9P241 1426 aa8.78□□□□□ -1
ATXN3-223ENST00000553686 TNS1Q9HBL0 1735 aaKnown RBP8.77□□□□□ -1
ATXN3-223ENST00000553686 AATKQ6ZMQ8 1374 aa8.77□□□□□ -1.01
ATXN3-223ENST00000553686 MAPK1P28482 360 aa8.77□□□□□ -1.01
ATXN3-223ENST00000553686 ZC3H6P61129 1189 aaKnown RBP8.77□□□□□ -1.01
ATXN3-223ENST00000553686 SUZ12Q15022 739 aaKnown RBP8.77□□□□□ -1.01
ATXN3-223ENST00000553686 ZNF526Q8TF50 670 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-223ENST00000553686 SLC7A3Q8WY07 619 aa8.77□□□□□ -1.01
ATXN3-223ENST00000553686 BHLHE41Q9C0J9 482 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-223ENST00000553686 DNAJC25Q9H1X3 360 aa8.77□□□□□ -1.01
ATXN3-223ENST00000553686 AKTIPQ9H8T0 292 aa8.77□□□□□ -1.01
ATXN3-223ENST00000553686 KCNK4Q9NYG8 393 aa8.77□□□□□ -1.01
ATXN3-223ENST00000553686 IQGAP3Q86VI3 1631 aa8.76□□□□□ -1.01
ATXN3-223ENST00000553686 DHX57Q6P158 1386 aaKnown RBP8.76□□□□□ -1.01
ATXN3-223ENST00000553686 KIAA0232Q92628 1395 aa8.76□□□□□ -1.01
ATXN3-223ENST00000553686 THSD7AQ9UPZ6 1657 aa8.76□□□□□ -1.01
ATXN3-223ENST00000553686 K7ELQ4 463 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-223ENST00000553686 TM4SF5O14894 197 aa8.76□□□□□ -1.01
ATXN3-223ENST00000553686 DDX3YO15523 660 aaKnown RBP8.76□□□□□ -1.01
ATXN3-223ENST00000553686 ADAM23O75077 832 aa8.76□□□□□ -1.01
ATXN3-223ENST00000553686 PLCB3Q01970 1234 aa8.76□□□□□ -1.01
ATXN3-223ENST00000553686 DDB1Q16531 1140 aa8.76□□□□□ -1.01
ATXN3-223ENST00000553686 KIAA0319Q5VV43 1072 aa8.76□□□□□ -1.01
ATXN3-223ENST00000553686 VN1R5Q7Z5H4 357 aa8.76□□□□□ -1.01
ATXN3-223ENST00000553686 WNT8BQ93098 351 aa8.76□□□□□ -1.01
ATXN3-223ENST00000553686 CSRNP1Q96S65 589 aa8.76□□□□□ -1.01
ATXN3-223ENST00000553686 LIN7BQ9HAP6 207 aa8.76□□□□□ -1.01
ATXN3-223ENST00000553686 OVOS2A0A0G2JMS6 1433 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms