RNA–Protein interactions for RNA: ENST00000552656.5

RNF41-211, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-211ENST00000552656 ABCF2Q9UG63 623 aa13.1□□□□□ -0.31
RNF41-211ENST00000552656 FBXO3Q9UK99 471 aa13.1□□□□□ -0.31
RNF41-211ENST00000552656 MROH7-TTC4A0A0A0MT08 1334 aa13.1□□□□□ -0.31
RNF41-211ENST00000552656 PFASO15067 1338 aa13.1□□□□□ -0.31
RNF41-211ENST00000552656 CUL9Q8IWT3 2517 aa13.09□□□□□ -0.31
RNF41-211ENST00000552656 FRMPD3Q5JV73 1810 aa13.09□□□□□ -0.31
RNF41-211ENST00000552656 GPR75-ASB3A0A0A6YYF3 556 aa13.09□□□□□ -0.31
RNF41-211ENST00000552656 TBC1D12O60347 775 aa13.09□□□□□ -0.31
RNF41-211ENST00000552656 HMGCRP04035 888 aa13.09□□□□□ -0.31
RNF41-211ENST00000552656 CAPN2P17655 700 aa13.09□□□□□ -0.31
RNF41-211ENST00000552656 MAGEA10P43363 369 aaPredicted RBP13.09□□□□□ -0.31
RNF41-211ENST00000552656 HMGCS2P54868 508 aa13.09□□□□□ -0.31
RNF41-211ENST00000552656 JAG1P78504 1218 aa13.09□□□□□ -0.31
RNF41-211ENST00000552656 MECOMQ03112 1051 aa13.09□□□□□ -0.31
RNF41-211ENST00000552656 DZIP1Q86YF9 867 aaKnown RBP13.09□□□□□ -0.31
RNF41-211ENST00000552656 DEFB123Q8N688 67 aa13.09□□□□□ -0.31
RNF41-211ENST00000552656 ANKLE1Q8NAG6 615 aa13.09□□□□□ -0.31
RNF41-211ENST00000552656 PROCA1Q8NCQ7 364 aaPredicted RBP13.09□□□□□ -0.31
RNF41-211ENST00000552656 ASCC2Q9H1I8 757 aaPredicted RBP13.09□□□□□ -0.31
RNF41-211ENST00000552656 RPTORQ8N122 1335 aa13.09□□□□□ -0.31
RNF41-211ENST00000552656 IL15P40933 162 aaPredicted RBP13.08□□□□□ -0.32
RNF41-211ENST00000552656 LRIT3Q3SXY7 679 aa13.08□□□□□ -0.32
RNF41-211ENST00000552656 GPR153Q6NV75 609 aa13.08□□□□□ -0.32
RNF41-211ENST00000552656 PI16Q6UXB8 463 aa13.08□□□□□ -0.32
RNF41-211ENST00000552656 ZNF280CQ8ND82 737 aa13.08□□□□□ -0.32
RNF41-211ENST00000552656 NBPF3Q9H094 633 aa13.08□□□□□ -0.32
RNF41-211ENST00000552656 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.08□□□□□ -0.32
RNF41-211ENST00000552656 HMX1Q9NP08 348 aaPredicted RBP13.08□□□□□ -0.32
RNF41-211ENST00000552656 MTMR10Q9NXD2 777 aa13.08□□□□□ -0.32
RNF41-211ENST00000552656 PNMA3Q9UL41 463 aa13.08□□□□□ -0.32
RNF41-211ENST00000552656 OGDHLQ9ULD0 1010 aa13.08□□□□□ -0.32
RNF41-211ENST00000552656 PDS5AQ29RF7 1337 aaKnown RBP13.08□□□□□ -0.32
RNF41-211ENST00000552656 MYO5AQ9Y4I1 1855 aaKnown RBP13.08□□□□□ -0.32
RNF41-211ENST00000552656 VCANP13611 3396 aa13.07□□□□□ -0.32
RNF41-211ENST00000552656 UBTFL1P0CB47 393 aaPredicted RBP13.07□□□□□ -0.32
RNF41-211ENST00000552656 CAP2P40123 477 aa13.07□□□□□ -0.32
RNF41-211ENST00000552656 SHROOM1Q2M3G4 852 aaPredicted RBP13.07□□□□□ -0.32
RNF41-211ENST00000552656 SH3D19Q5HYK7 790 aa13.07□□□□□ -0.32
RNF41-211ENST00000552656 MAP3K21Q5TCX8 1036 aa13.07□□□□□ -0.32
RNF41-211ENST00000552656 POTEEQ6S8J3 1075 aa13.07□□□□□ -0.32
RNF41-211ENST00000552656 TBC1D9Q6ZT07 1266 aa13.07□□□□□ -0.32
RNF41-211ENST00000552656 ZGPATQ8N5A5 531 aaKnown RBP13.07□□□□□ -0.32
RNF41-211ENST00000552656 XAGE2Q96GT9 111 aa13.07□□□□□ -0.32
RNF41-211ENST00000552656 OSBPL5Q9H0X9 879 aaPredicted RBP13.07□□□□□ -0.32
RNF41-211ENST00000552656 C11orf49Q9H6J7 331 aa13.07□□□□□ -0.32
RNF41-211ENST00000552656 TXNRD2Q9NNW7 524 aa13.07□□□□□ -0.32
RNF41-211ENST00000552656 COPRSQ9NQ92 184 aa13.07□□□□□ -0.32
RNF41-211ENST00000552656 FOCADQ5VW36 1801 aa13.06□□□□□ -0.32
RNF41-211ENST00000552656 COL2A1P02458 1487 aaPredicted RBP13.06□□□□□ -0.32
RNF41-211ENST00000552656 A0A1B0GUL7 405 aa13.06□□□□□ -0.32
RNF41-211ENST00000552656 ANP32CO43423 234 aa13.06□□□□□ -0.32
RNF41-211ENST00000552656 NPM3O75607 178 aaKnown RBP13.06□□□□□ -0.32
RNF41-211ENST00000552656 CYP2B6P20813 491 aa13.06□□□□□ -0.32
RNF41-211ENST00000552656 GCLCP48506 637 aaPredicted RBP13.06□□□□□ -0.32
RNF41-211ENST00000552656 TDHQ8IZJ6 230 aa13.06□□□□□ -0.32
RNF41-211ENST00000552656 NSUN4Q96CB9 384 aaKnown RBP13.06□□□□□ -0.32
RNF41-211ENST00000552656 HMG20BQ9P0W2 317 aa13.06□□□□□ -0.32
RNF41-211ENST00000552656 MORF4L1Q9UBU8 362 aa13.06□□□□□ -0.32
RNF41-211ENST00000552656 STXBP5LQ9Y2K9 1186 aa13.06□□□□□ -0.32
RNF41-211ENST00000552656 USP17L5A8MUK1 530 aa13.05□□□□□ -0.32
RNF41-211ENST00000552656 COL6A1P12109 1028 aa13.05□□□□□ -0.32
RNF41-211ENST00000552656 PRKAR2AP13861 404 aaKnown RBP13.05□□□□□ -0.32
RNF41-211ENST00000552656 SLFN5Q08AF3 891 aa13.05□□□□□ -0.32
RNF41-211ENST00000552656 TFCP2Q12800 502 aa13.05□□□□□ -0.32
RNF41-211ENST00000552656 ERICH6Q7L0X2 663 aa13.05□□□□□ -0.32
RNF41-211ENST00000552656 CDCA7LQ96GN5 454 aa13.05□□□□□ -0.32
RNF41-211ENST00000552656 P2RX7Q99572 595 aaKnown RBP13.05□□□□□ -0.32
RNF41-211ENST00000552656 MEIS3Q99687 375 aa13.05□□□□□ -0.32
RNF41-211ENST00000552656 DNAJC18Q9H819 358 aa13.05□□□□□ -0.32
RNF41-211ENST00000552656 MAST2Q6P0Q8 1798 aa13.04□□□□□ -0.32
RNF41-211ENST00000552656 CCND3P30281 292 aaPredicted RBP13.04□□□□□ -0.32
RNF41-211ENST00000552656 CACNB2Q08289 660 aaPredicted RBP13.04□□□□□ -0.32
RNF41-211ENST00000552656 CCL14Q16627 93 aa13.04□□□□□ -0.32
RNF41-211ENST00000552656 LRRC26Q2I0M4 334 aa13.04□□□□□ -0.32
RNF41-211ENST00000552656 Q3C1V9 767 aa13.04□□□□□ -0.32
RNF41-211ENST00000552656 LHX8Q68G74 356 aa13.04□□□□□ -0.32
RNF41-211ENST00000552656 SLF2Q8IX21 1173 aa13.04□□□□□ -0.32
RNF41-211ENST00000552656 USP6NLQ92738 828 aa13.04□□□□□ -0.32
RNF41-211ENST00000552656 UBE2OQ9C0C9 1292 aaKnown RBP13.04□□□□□ -0.32
RNF41-211ENST00000552656 RBPJLQ9UBG7 517 aa13.04□□□□□ -0.32
RNF41-211ENST00000552656 PRUNE2Q8WUY3 3088 aa13.04□□□□□ -0.32
RNF41-211ENST00000552656 SPTBN5Q9NRC6 3674 aaKnown RBP13.03□□□□□ -0.32
RNF41-211ENST00000552656 E9PSI1 815 aa13.03□□□□□ -0.32
RNF41-211ENST00000552656 MTMR2Q13614 643 aa13.03□□□□□ -0.32
RNF41-211ENST00000552656 ALDH1L2Q3SY69 923 aa13.03□□□□□ -0.32
RNF41-211ENST00000552656 SPTY2D1Q68D10 685 aaPredicted RBP13.03□□□□□ -0.32
RNF41-211ENST00000552656 SH3RF3Q8TEJ3 882 aaPredicted RBP13.03□□□□□ -0.32
RNF41-211ENST00000552656 WDR18Q9BV38 432 aa13.03□□□□□ -0.32
RNF41-211ENST00000552656 COL25A1Q9BXS0 654 aaPredicted RBP13.03□□□□□ -0.32
RNF41-211ENST00000552656 PORCNQ9H237 461 aa13.03□□□□□ -0.32
RNF41-211ENST00000552656 SMC4Q9NTJ3 1288 aa13.03□□□□□ -0.32
RNF41-211ENST00000552656 NOB1Q9ULX3 412 aaKnown RBP13.03□□□□□ -0.32
RNF41-211ENST00000552656 LTBP2Q14767 1821 aa13.02□□□□□ -0.32
RNF41-211ENST00000552656 HOXA7P31268 230 aaPredicted RBP13.02□□□□□ -0.33
RNF41-211ENST00000552656 BACE1P56817 501 aa13.02□□□□□ -0.33
RNF41-211ENST00000552656 HERVK_113P62684 666 aa13.02□□□□□ -0.33
RNF41-211ENST00000552656 MDM2Q00987 491 aaPredicted RBP13.02□□□□□ -0.33
RNF41-211ENST00000552656 PABPC4Q13310 644 aaKnown RBP eCLIP13.02□□□□□ -0.33
RNF41-211ENST00000552656 SPATA5Q8NB90 893 aa13.02□□□□□ -0.33
RNF41-211ENST00000552656 TBC1D2Q9BYX2 928 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms