RNA–Protein interactions for RNA: ENST00000551459.5

RAB5B-209, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-209ENST00000551459 KIF4BQ2VIQ3 1234 aa7□□□□□ -1.29
RAB5B-209ENST00000551459 NPAS4Q8IUM7 802 aa7□□□□□ -1.29
RAB5B-209ENST00000551459 PLEKHM2Q8IWE5 1019 aa7□□□□□ -1.29
RAB5B-209ENST00000551459 SLF2Q8IX21 1173 aa7□□□□□ -1.29
RAB5B-209ENST00000551459 LRRN4Q8WUT4 740 aa7□□□□□ -1.29
RAB5B-209ENST00000551459 GCC1Q96CN9 775 aa7□□□□□ -1.29
RAB5B-209ENST00000551459 ZC3H12CQ9C0D7 883 aaKnown RBP7□□□□□ -1.29
RAB5B-209ENST00000551459 DCTPP1Q9H773 170 aa7□□□□□ -1.29
RAB5B-209ENST00000551459 SEC31BQ9NQW1 1179 aa7□□□□□ -1.29
RAB5B-209ENST00000551459 GGA3Q9NZ52 723 aa7□□□□□ -1.29
RAB5B-209ENST00000551459 AKAP2Q9Y2D5 859 aa7□□□□□ -1.29
RAB5B-209ENST00000551459 CHMP3Q9Y3E7 222 aa7□□□□□ -1.29
RAB5B-209ENST00000551459 TNRC18O15417 2968 aaPredicted RBP7□□□□□ -1.29
RAB5B-209ENST00000551459 CASP8AP2Q9UKL3 1982 aa7□□□□□ -1.29
RAB5B-209ENST00000551459 COL4A1P02462 1669 aa7□□□□□ -1.29
RAB5B-209ENST00000551459 MYH13Q9UKX3 1938 aa6.99□□□□□ -1.29
RAB5B-209ENST00000551459 PNMA6EA0A0J9YXQ4 647 aa6.99□□□□□ -1.29
RAB5B-209ENST00000551459 HOXB3P14651 431 aaPredicted RBP6.99□□□□□ -1.29
RAB5B-209ENST00000551459 ZNF280AP59817 542 aaPredicted RBP6.99□□□□□ -1.29
RAB5B-209ENST00000551459 CHRNDQ07001 517 aa6.99□□□□□ -1.29
RAB5B-209ENST00000551459 G3BP1Q13283 466 aaKnown RBP eCLIP6.99□□□□□ -1.29
RAB5B-209ENST00000551459 SCARF1Q14162 830 aa6.99□□□□□ -1.29
RAB5B-209ENST00000551459 CDCA5Q96FF9 252 aa6.99□□□□□ -1.29
RAB5B-209ENST00000551459 CRBNQ96SW2 442 aa6.99□□□□□ -1.29
RAB5B-209ENST00000551459 RWDD1Q9H446 243 aaPredicted RBP6.99□□□□□ -1.29
RAB5B-209ENST00000551459 TMEM134Q9H6X4 195 aa6.99□□□□□ -1.29
RAB5B-209ENST00000551459 CNNM1Q9NRU3 951 aa6.99□□□□□ -1.29
RAB5B-209ENST00000551459 CEP126Q9P2H0 1117 aa6.99□□□□□ -1.29
RAB5B-209ENST00000551459 ARAP2Q8WZ64 1704 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 MED23Q9ULK4 1368 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 USP17L3A6NCW0 530 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 USP17L4A6NCW7 530 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 USP17L15C9J2P7 530 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 USP17L10C9JJH3 530 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 USP17L13C9JLJ4 530 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 USP17L12C9JPN9 530 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 USP17L11C9JVI0 530 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 USP17L21D6R901 530 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 USP17L18D6R9N7 530 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 USP17L22D6RA61 530 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 USP17L17D6RBQ6 530 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 USP17L19D6RCP7 530 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 USP17L20D6RJB6 530 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 SURF6O75683 361 aaKnown RBP6.98□□□□□ -1.29
RAB5B-209ENST00000551459 UFL1O94874 794 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 USP17L24Q0WX57 530 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 NOM1Q5C9Z4 860 aaKnown RBP6.98□□□□□ -1.29
RAB5B-209ENST00000551459 ANGEL2Q5VTE6 544 aaKnown RBP6.98□□□□□ -1.29
RAB5B-209ENST00000551459 USP17L2Q6R6M4 530 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 MOB2Q70IA6 237 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 USP17L1Q7RTZ2 530 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 ATG9AQ7Z3C6 839 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 PODNQ7Z5L7 613 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 CTU1Q7Z7A3 348 aaKnown RBP6.98□□□□□ -1.29
RAB5B-209ENST00000551459 RASAL3Q86YV0 1011 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 SIRT2Q8IXJ6 389 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 VGLL2Q8N8G2 317 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 GMLQ99445 158 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 ANKIB1Q9P2G1 1089 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 GGA1Q9UJY5 639 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 PCDHGA4Q9Y5G9 962 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 ZNF804BA4D1E1 1349 aa6.98□□□□□ -1.29
RAB5B-209ENST00000551459 WTIPA6NIX2 430 aaPredicted RBP6.97□□□□□ -1.29
RAB5B-209ENST00000551459 UBE2Q2LH0YL09 131 aa6.97□□□□□ -1.29
RAB5B-209ENST00000551459 NEFLP07196 543 aa6.97□□□□□ -1.29
RAB5B-209ENST00000551459 FGFR2P21802 821 aa6.97□□□□□ -1.29
RAB5B-209ENST00000551459 FKBP1AP62942 108 aaKnown RBP6.97□□□□□ -1.29
RAB5B-209ENST00000551459 FKBP1BP68106 108 aa6.97□□□□□ -1.29
RAB5B-209ENST00000551459 NR1H3Q13133 447 aa6.97□□□□□ -1.29
RAB5B-209ENST00000551459 PUM3Q15397 648 aaKnown RBP6.97□□□□□ -1.29
RAB5B-209ENST00000551459 NAALADL2Q58DX5 795 aa6.97□□□□□ -1.29
RAB5B-209ENST00000551459 CAVIN4Q5BKX8 364 aa6.97□□□□□ -1.29
RAB5B-209ENST00000551459 METTL24Q5JXM2 366 aa6.97□□□□□ -1.29
RAB5B-209ENST00000551459 PRAMEF18Q5VWM3 479 aa6.97□□□□□ -1.29
RAB5B-209ENST00000551459 ANKRD13AQ8IZ07 590 aa6.97□□□□□ -1.29
RAB5B-209ENST00000551459 AGBL3Q8NEM8 1001 aa6.97□□□□□ -1.29
RAB5B-209ENST00000551459 FAM200AQ8TCP9 573 aa6.97□□□□□ -1.29
RAB5B-209ENST00000551459 LPIN2Q92539 896 aa6.97□□□□□ -1.29
RAB5B-209ENST00000551459 KIF1BPQ96EK5 621 aa6.97□□□□□ -1.29
RAB5B-209ENST00000551459 ZNF512BQ96KM6 892 aaPredicted RBP6.97□□□□□ -1.29
RAB5B-209ENST00000551459 CCDC85AQ96PX6 553 aaPredicted RBP6.97□□□□□ -1.29
RAB5B-209ENST00000551459 COA1Q9GZY4 146 aa6.97□□□□□ -1.29
RAB5B-209ENST00000551459 SCAF8Q9UPN6 1271 aaKnown RBP6.97□□□□□ -1.29
RAB5B-209ENST00000551459 HPS5Q9UPZ3 1129 aa6.97□□□□□ -1.29
RAB5B-209ENST00000551459 USP17L5A8MUK1 530 aa6.96□□□□□ -1.3
RAB5B-209ENST00000551459 SASH1O94885 1247 aa6.96□□□□□ -1.3
RAB5B-209ENST00000551459 TBC1D8O95759 1140 aa6.96□□□□□ -1.3
RAB5B-209ENST00000551459 IFIT1P09914 478 aaKnown RBP6.96□□□□□ -1.3
RAB5B-209ENST00000551459 HOXB1P14653 301 aaPredicted RBP6.96□□□□□ -1.3
RAB5B-209ENST00000551459 GCGRP47871 477 aa6.96□□□□□ -1.3
RAB5B-209ENST00000551459 SERPINB4P48594 390 aa6.96□□□□□ -1.3
RAB5B-209ENST00000551459 SWI5Q1ZZU3 235 aa6.96□□□□□ -1.3
RAB5B-209ENST00000551459 LRRC24Q50LG9 513 aa6.96□□□□□ -1.3
RAB5B-209ENST00000551459 TMED8Q6PL24 325 aaPredicted RBP6.96□□□□□ -1.3
RAB5B-209ENST00000551459 SMC5Q8IY18 1101 aa6.96□□□□□ -1.3
RAB5B-209ENST00000551459 CLASRPQ8N2M8 674 aaKnown RBP6.96□□□□□ -1.3
RAB5B-209ENST00000551459 ZNF454Q8N9F8 522 aa6.96□□□□□ -1.3
RAB5B-209ENST00000551459 EXOC6Q8TAG9 804 aa6.96□□□□□ -1.3
RAB5B-209ENST00000551459 ZNF296Q8WUU4 475 aaPredicted RBP6.96□□□□□ -1.3
RAB5B-209ENST00000551459 ZNF594Q96JF6 807 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms