RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 HELLSQ9NRZ9 838 aa12.04□□□□□ -0.48
PFDN5-213ENST00000550964 WBP1LQ9NX94 342 aa12.04□□□□□ -0.48
PFDN5-213ENST00000550964 SWAP70Q9UH65 585 aa12.04□□□□□ -0.48
PFDN5-213ENST00000550964 SERPINB13Q9UIV8 391 aa12.04□□□□□ -0.48
PFDN5-213ENST00000550964 SSC5DA1L4H1 1573 aa12.04□□□□□ -0.48
PFDN5-213ENST00000550964 DDTLA6NHG4 134 aaPredicted RBP12.03□□□□□ -0.48
PFDN5-213ENST00000550964 SPDYE5A6NIY4 337 aa12.03□□□□□ -0.48
PFDN5-213ENST00000550964 MBD4O95243 580 aa12.03□□□□□ -0.48
PFDN5-213ENST00000550964 SLC3A2P08195 630 aaKnown RBP12.03□□□□□ -0.48
PFDN5-213ENST00000550964 ASNSP08243 561 aa12.03□□□□□ -0.48
PFDN5-213ENST00000550964 CETPP11597 493 aa12.03□□□□□ -0.48
PFDN5-213ENST00000550964 CTCFP49711 727 aaPredicted RBP12.03□□□□□ -0.48
PFDN5-213ENST00000550964 KIF23Q02241 960 aaPredicted RBP12.03□□□□□ -0.48
PFDN5-213ENST00000550964 PPIL2Q13356 520 aa12.03□□□□□ -0.48
PFDN5-213ENST00000550964 VGLL4Q14135 290 aa12.03□□□□□ -0.48
PFDN5-213ENST00000550964 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.03□□□□□ -0.48
PFDN5-213ENST00000550964 MIGA2Q7L4E1 593 aa12.03□□□□□ -0.48
PFDN5-213ENST00000550964 METTL16Q86W50 562 aaKnown RBP12.03□□□□□ -0.48
PFDN5-213ENST00000550964 PLEKHM2Q8IWE5 1019 aa12.03□□□□□ -0.48
PFDN5-213ENST00000550964 SCYL3Q8IZE3 742 aa12.03□□□□□ -0.48
PFDN5-213ENST00000550964 WNK4Q96J92 1243 aa12.03□□□□□ -0.48
PFDN5-213ENST00000550964 DDX4Q9NQI0 724 aaKnown RBP12.03□□□□□ -0.48
PFDN5-213ENST00000550964 MCM9Q9NXL9 1143 aa12.03□□□□□ -0.48
PFDN5-213ENST00000550964 ARPP21Q9UBL0 812 aaPredicted RBP12.03□□□□□ -0.48
PFDN5-213ENST00000550964 PCNTO95613 3336 aa12.03□□□□□ -0.48
PFDN5-213ENST00000550964 BAZ2AQ9UIF9 1905 aaKnown RBP12.02□□□□□ -0.49
PFDN5-213ENST00000550964 CXCL11O14625 94 aa12.02□□□□□ -0.49
PFDN5-213ENST00000550964 DYNLL1P63167 89 aaKnown RBP12.02□□□□□ -0.49
PFDN5-213ENST00000550964 SNAPC2Q13487 334 aa12.02□□□□□ -0.49
PFDN5-213ENST00000550964 MOB2Q70IA6 237 aa12.02□□□□□ -0.49
PFDN5-213ENST00000550964 FASTKD5Q7L8L6 764 aaKnown RBP12.02□□□□□ -0.49
PFDN5-213ENST00000550964 OPTNQ96CV9 577 aa12.02□□□□□ -0.49
PFDN5-213ENST00000550964 EDC3Q96F86 508 aaKnown RBP12.02□□□□□ -0.49
PFDN5-213ENST00000550964 CABP5Q9NP86 173 aa12.02□□□□□ -0.49
PFDN5-213ENST00000550964 SLC4A4Q9Y6R1 1079 aa12.02□□□□□ -0.49
PFDN5-213ENST00000550964 PATL2C9JE40 543 aaKnown RBP12.01□□□□□ -0.49
PFDN5-213ENST00000550964 CAP2P40123 477 aa12.01□□□□□ -0.49
PFDN5-213ENST00000550964 NT5C2P49902 561 aa12.01□□□□□ -0.49
PFDN5-213ENST00000550964 ARHGEF6Q15052 776 aa12.01□□□□□ -0.49
PFDN5-213ENST00000550964 RUFY2Q8WXA3 655 aa12.01□□□□□ -0.49
PFDN5-213ENST00000550964 RILPL2Q969X0 211 aa12.01□□□□□ -0.49
PFDN5-213ENST00000550964 STRBPQ96SI9 672 aaKnown RBP12.01□□□□□ -0.49
PFDN5-213ENST00000550964 ARMT1Q9H993 441 aa12.01□□□□□ -0.49
PFDN5-213ENST00000550964 ELP3Q9H9T3 547 aa12.01□□□□□ -0.49
PFDN5-213ENST00000550964 DCP1AQ9NPI6 582 aaPredicted RBP12.01□□□□□ -0.49
PFDN5-213ENST00000550964 DIAPH3Q9NSV4 1193 aa12.01□□□□□ -0.49
PFDN5-213ENST00000550964 PALD1Q9ULE6 856 aa12.01□□□□□ -0.49
PFDN5-213ENST00000550964 TESPA1A2RU30 521 aaPredicted RBP12□□□□□ -0.49
PFDN5-213ENST00000550964 PHF20L1A8MW92 1017 aa12□□□□□ -0.49
PFDN5-213ENST00000550964 GPAA1O43292 621 aa12□□□□□ -0.49
PFDN5-213ENST00000550964 AOC2O75106 756 aa12□□□□□ -0.49
PFDN5-213ENST00000550964 APPP05067 770 aa12□□□□□ -0.49
PFDN5-213ENST00000550964 HSPA1AP0DMV8 641 aaKnown RBP12□□□□□ -0.49
PFDN5-213ENST00000550964 HSPA1BP0DMV9 641 aaKnown RBP12□□□□□ -0.49
PFDN5-213ENST00000550964 PABPC4Q13310 644 aaKnown RBP eCLIP12□□□□□ -0.493e-11■■■□□ 18.9
PFDN5-213ENST00000550964 MCMDC2Q4G0Z9 681 aa12□□□□□ -0.49
PFDN5-213ENST00000550964 SBK1Q52WX2 424 aa12□□□□□ -0.49
PFDN5-213ENST00000550964 NOM1Q5C9Z4 860 aaKnown RBP12□□□□□ -0.49
PFDN5-213ENST00000550964 PPP4R3BQ5MIZ7 849 aa12□□□□□ -0.49
PFDN5-213ENST00000550964 ZMYM1Q5SVZ6 1142 aa12□□□□□ -0.49
PFDN5-213ENST00000550964 TSHZ3Q63HK5 1081 aa12□□□□□ -0.49
PFDN5-213ENST00000550964 SH3BP5LQ7L8J4 393 aa12□□□□□ -0.49
PFDN5-213ENST00000550964 ZFPM1Q8IX07 1006 aa12□□□□□ -0.49
PFDN5-213ENST00000550964 LCORLQ8N3X6 602 aa12□□□□□ -0.49
PFDN5-213ENST00000550964 OTUD7AQ8TE49 926 aaPredicted RBP12□□□□□ -0.49
PFDN5-213ENST00000550964 ZKSCAN4Q969J2 545 aaPredicted RBP12□□□□□ -0.49
PFDN5-213ENST00000550964 OTUD5Q96G74 571 aa12□□□□□ -0.49
PFDN5-213ENST00000550964 CCDC17Q96LX7 622 aa12□□□□□ -0.49
PFDN5-213ENST00000550964 CFHR5Q9BXR6 569 aa12□□□□□ -0.49
PFDN5-213ENST00000550964 SNCAIPQ9Y6H5 919 aa12□□□□□ -0.49
PFDN5-213ENST00000550964 USP17L5A8MUK1 530 aa11.99□□□□□ -0.49
PFDN5-213ENST00000550964 CERKLQ49MI3 558 aaPredicted RBP11.99□□□□□ -0.49
PFDN5-213ENST00000550964 CLMNQ96JQ2 1002 aa11.99□□□□□ -0.49
PFDN5-213ENST00000550964 PUS7LQ9H0K6 701 aaKnown RBP11.99□□□□□ -0.49
PFDN5-213ENST00000550964 PRDM10Q9NQV6 1147 aa11.99□□□□□ -0.49
PFDN5-213ENST00000550964 SAP30BPQ9UHR5 308 aaKnown RBP11.99□□□□□ -0.49
PFDN5-213ENST00000550964 DDX60LQ5H9U9 1706 aaKnown RBP11.99□□□□□ -0.49
PFDN5-213ENST00000550964 C19orf81C9J6K1 198 aa11.98□□□□□ -0.49
PFDN5-213ENST00000550964 PTPRAP18433 802 aa11.98□□□□□ -0.49
PFDN5-213ENST00000550964 INPP5BP32019 993 aa11.98□□□□□ -0.49
PFDN5-213ENST00000550964 TDO2P48775 406 aa11.98□□□□□ -0.49
PFDN5-213ENST00000550964 USP14P54578 494 aa11.98□□□□□ -0.49
PFDN5-213ENST00000550964 PDE4BQ07343 736 aa11.98□□□□□ -0.49
PFDN5-213ENST00000550964 TTC22Q5TAA0 569 aa11.98□□□□□ -0.49
PFDN5-213ENST00000550964 TATDN1Q6P1N9 297 aa11.98□□□□□ -0.49
PFDN5-213ENST00000550964 CDAN1Q8IWY9 1227 aa11.98□□□□□ -0.49
PFDN5-213ENST00000550964 OSBP2Q969R2 916 aa11.98□□□□□ -0.49
PFDN5-213ENST00000550964 NAPBQ9H115 298 aa11.98□□□□□ -0.49
PFDN5-213ENST00000550964 SH2D4AQ9H788 454 aa11.98□□□□□ -0.49
PFDN5-213ENST00000550964 PPP4R2Q9NY27 417 aa11.98□□□□□ -0.49
PFDN5-213ENST00000550964 KCNH4Q9UQ05 1017 aa11.98□□□□□ -0.49
PFDN5-213ENST00000550964 SLC45A1Q9Y2W3 748 aa11.98□□□□□ -0.49
PFDN5-213ENST00000550964 ZHX2Q9Y6X8 837 aa11.98□□□□□ -0.49
PFDN5-213ENST00000550964 PTPRFP10586 1907 aa11.98□□□□□ -0.49
PFDN5-213ENST00000550964 SIPA1L1O43166 1804 aa11.97□□□□□ -0.49
PFDN5-213ENST00000550964 RAD50Q92878 1312 aa11.97□□□□□ -0.49
PFDN5-213ENST00000550964 CCL15-CCL14A0A0B4J2E2 113 aa11.97□□□□□ -0.49
PFDN5-213ENST00000550964 PCP11498 1178 aaKnown RBP11.97□□□□□ -0.49
PFDN5-213ENST00000550964 SDSP20132 328 aa11.97□□□□□ -0.49
PFDN5-213ENST00000550964 CCL15Q16663 113 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms