RNA–Protein interactions for RNA: ENST00000550659.1

PRDM4-206, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-206ENST00000550659 F13A1P00488 732 aa8.03□□□□□ -1.12
PRDM4-206ENST00000550659 PCDH1Q08174 1060 aa8.03□□□□□ -1.12
PRDM4-206ENST00000550659 LAPTM4AQ15012 233 aa8.03□□□□□ -1.12
PRDM4-206ENST00000550659 LRRC14Q15048 493 aa8.03□□□□□ -1.12
PRDM4-206ENST00000550659 SEZ6Q53EL9 994 aa8.03□□□□□ -1.12
PRDM4-206ENST00000550659 TNNI3KQ59H18 835 aa8.03□□□□□ -1.12
PRDM4-206ENST00000550659 DIEXFQ68CQ4 756 aaKnown RBP8.03□□□□□ -1.12
PRDM4-206ENST00000550659 ZNF662Q6ZS27 426 aa8.03□□□□□ -1.12
PRDM4-206ENST00000550659 LRP10Q7Z4F1 713 aa8.03□□□□□ -1.12
PRDM4-206ENST00000550659 TNFRSF25Q93038 417 aa8.03□□□□□ -1.12
PRDM4-206ENST00000550659 ANAPC16Q96DE5 110 aa8.03□□□□□ -1.12
PRDM4-206ENST00000550659 TRIM47Q96LD4 638 aa8.03□□□□□ -1.12
PRDM4-206ENST00000550659 IGFLR1Q9H665 355 aa8.03□□□□□ -1.12
PRDM4-206ENST00000550659 PCDHB5Q9Y5E4 795 aa8.03□□□□□ -1.12
PRDM4-206ENST00000550659 PTPRAP18433 802 aa8.02□□□□□ -1.13
PRDM4-206ENST00000550659 ZNF157P51786 506 aaPredicted RBP8.02□□□□□ -1.13
PRDM4-206ENST00000550659 CWF19L2Q2TBE0 894 aaKnown RBP8.02□□□□□ -1.13
PRDM4-206ENST00000550659 RASIP1Q5U651 963 aa8.02□□□□□ -1.13
PRDM4-206ENST00000550659 VN1R5Q7Z5H4 357 aa8.02□□□□□ -1.13
PRDM4-206ENST00000550659 HNRNPLLQ8WVV9 542 aaKnown RBP8.02□□□□□ -1.13
PRDM4-206ENST00000550659 PLD4Q96BZ4 506 aa8.02□□□□□ -1.13
PRDM4-206ENST00000550659 ADAM19Q9H013 955 aa8.02□□□□□ -1.13
PRDM4-206ENST00000550659 R3HCC1Q9Y3T6 440 aaKnown RBP8.02□□□□□ -1.13
PRDM4-206ENST00000550659 MYO3AQ8NEV4 1616 aa8.02□□□□□ -1.13
PRDM4-206ENST00000550659 TNRQ92752 1358 aa8.01□□□□□ -1.13
PRDM4-206ENST00000550659 TLR3O15455 904 aaKnown RBP8.01□□□□□ -1.13
PRDM4-206ENST00000550659 CILPO75339 1184 aa8.01□□□□□ -1.13
PRDM4-206ENST00000550659 ZNF165P49910 485 aa8.01□□□□□ -1.13
PRDM4-206ENST00000550659 TBC1D8BQ0IIM8 1120 aa8.01□□□□□ -1.13
PRDM4-206ENST00000550659 IDI1Q13907 227 aa8.01□□□□□ -1.13
PRDM4-206ENST00000550659 ZNF423Q2M1K9 1284 aa8.01□□□□□ -1.13
PRDM4-206ENST00000550659 SCARA3Q6AZY7 606 aa8.01□□□□□ -1.13
PRDM4-206ENST00000550659 FAM35AQ86V20 835 aa8.01□□□□□ -1.13
PRDM4-206ENST00000550659 SULF2Q8IWU5 870 aa8.01□□□□□ -1.13
PRDM4-206ENST00000550659 REXO1Q8N1G1 1221 aaKnown RBP8.01□□□□□ -1.13
PRDM4-206ENST00000550659 MICALL1Q8N3F8 863 aa8.01□□□□□ -1.13
PRDM4-206ENST00000550659 FBXO27Q8NI29 283 aa8.01□□□□□ -1.13
PRDM4-206ENST00000550659 SRPK1Q96SB4 655 aaKnown RBP8.01□□□□□ -1.13
PRDM4-206ENST00000550659 EMILIN2Q9BXX0 1053 aa8.01□□□□□ -1.13
PRDM4-206ENST00000550659 PPT2Q9UMR5 302 aa8.01□□□□□ -1.13
PRDM4-206ENST00000550659 SLC6A14Q9UN76 642 aa8.01□□□□□ -1.13
PRDM4-206ENST00000550659 TMEM131LA2VDJ0 1609 aa8□□□□□ -1.13
PRDM4-206ENST00000550659 SBNO2Q9Y2G9 1366 aa8□□□□□ -1.13
PRDM4-206ENST00000550659 GPR25O00155 361 aa8□□□□□ -1.13
PRDM4-206ENST00000550659 C2CD2LO14523 706 aa8□□□□□ -1.13
PRDM4-206ENST00000550659 BMP4P12644 408 aa8□□□□□ -1.13
PRDM4-206ENST00000550659 CPB1P15086 417 aa8□□□□□ -1.13
PRDM4-206ENST00000550659 HSD3B2P26439 372 aa8□□□□□ -1.13
PRDM4-206ENST00000550659 ARNTP27540 789 aa8□□□□□ -1.13
PRDM4-206ENST00000550659 GIPRP48546 466 aa8□□□□□ -1.13
PRDM4-206ENST00000550659 EIF6P56537 245 aaKnown RBP8□□□□□ -1.13
PRDM4-206ENST00000550659 LLGL2Q6P1M3 1020 aa8□□□□□ -1.13
PRDM4-206ENST00000550659 CCDC81Q6ZN84 652 aa8□□□□□ -1.13
PRDM4-206ENST00000550659 REC114Q7Z4M0 266 aa8□□□□□ -1.13
PRDM4-206ENST00000550659 ANKRD13AQ8IZ07 590 aa8□□□□□ -1.13
PRDM4-206ENST00000550659 OR6P1Q8NGX9 317 aa8□□□□□ -1.13
PRDM4-206ENST00000550659 JARID2Q92833 1246 aaPredicted RBP8□□□□□ -1.13
PRDM4-206ENST00000550659 FRRS1LQ9P0K9 344 aa8□□□□□ -1.13
PRDM4-206ENST00000550659 MRPL42Q9Y6G3 142 aaKnown RBP8□□□□□ -1.13
PRDM4-206ENST00000550659 SPATA31E1Q6ZUB1 1445 aa8□□□□□ -1.13
PRDM4-206ENST00000550659 UBR1Q8IWV7 1749 aa8□□□□□ -1.13
PRDM4-206ENST00000550659 ADGRB3O60242 1522 aa7.99□□□□□ -1.13
PRDM4-206ENST00000550659 ADARB2-AS1A8MUL3 147 aa7.99□□□□□ -1.13
PRDM4-206ENST00000550659 SMAD7O15105 426 aaKnown RBP7.99□□□□□ -1.13
PRDM4-206ENST00000550659 ESRRAP11474 423 aaPredicted RBP7.99□□□□□ -1.13
PRDM4-206ENST00000550659 IMPDH2P12268 514 aa7.99□□□□□ -1.13
PRDM4-206ENST00000550659 MCM4P33991 863 aa7.99□□□□□ -1.13
PRDM4-206ENST00000550659 SEPT6Q14141 434 aa7.99□□□□□ -1.13
PRDM4-206ENST00000550659 RASA3Q14644 834 aa7.99□□□□□ -1.13
PRDM4-206ENST00000550659 TCEAL1Q15170 157 aa7.99□□□□□ -1.13
PRDM4-206ENST00000550659 PERM1Q5SV97 790 aa7.99□□□□□ -1.13
PRDM4-206ENST00000550659 DDX54Q8TDD1 881 aaKnown RBP7.99□□□□□ -1.13
PRDM4-206ENST00000550659 NANOS1Q8WY41 292 aaKnown RBP7.99□□□□□ -1.13
PRDM4-206ENST00000550659 GAL3ST3Q96A11 431 aa7.99□□□□□ -1.13
PRDM4-206ENST00000550659 DEPDC7Q96QD5 511 aa7.99□□□□□ -1.13
PRDM4-206ENST00000550659 FERD3LQ96RJ6 166 aa7.99□□□□□ -1.13
PRDM4-206ENST00000550659 SNTG2Q9NY99 539 aa7.99□□□□□ -1.13
PRDM4-206ENST00000550659 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.99□□□□□ -1.13
PRDM4-206ENST00000550659 CEP170BQ9Y4F5 1589 aaPredicted RBP7.98□□□□□ -1.13
PRDM4-206ENST00000550659 CDC14CA4D256 554 aa7.98□□□□□ -1.13
PRDM4-206ENST00000550659 FAM177BA6PVY3 158 aa7.98□□□□□ -1.13
PRDM4-206ENST00000550659 PPFIA3O75145 1194 aa7.98□□□□□ -1.13
PRDM4-206ENST00000550659 BPNT1O95861 308 aa7.98□□□□□ -1.13
PRDM4-206ENST00000550659 PCBP4P57723 403 aaKnown RBP7.98□□□□□ -1.13
PRDM4-206ENST00000550659 ZNF252P-AS1Q0IIN9 211 aa7.98□□□□□ -1.13
PRDM4-206ENST00000550659 ELMSAN1Q6PJG2 1045 aa7.98□□□□□ -1.13
PRDM4-206ENST00000550659 ADAMTSL4Q6UY14 1074 aa7.98□□□□□ -1.13
PRDM4-206ENST00000550659 SV2AQ7L0J3 742 aa7.98□□□□□ -1.13
PRDM4-206ENST00000550659 CACTIN-AS1Q8N1I8 211 aa7.98□□□□□ -1.13
PRDM4-206ENST00000550659 FAM169BQ8N8A8 192 aa7.98□□□□□ -1.13
PRDM4-206ENST00000550659 RBBP8NLQ8NC74 664 aaPredicted RBP7.98□□□□□ -1.13
PRDM4-206ENST00000550659 STK35Q8TDR2 534 aa7.98□□□□□ -1.13
PRDM4-206ENST00000550659 CRBNQ96SW2 442 aa7.98□□□□□ -1.13
PRDM4-206ENST00000550659 SMG9Q9H0W8 520 aaKnown RBP7.98□□□□□ -1.13
PRDM4-206ENST00000550659 NAGPAQ9UK23 515 aa7.98□□□□□ -1.13
PRDM4-206ENST00000550659 ZNRF3Q9ULT6 936 aa7.98□□□□□ -1.13
PRDM4-206ENST00000550659 MSRB2Q9Y3D2 182 aa7.98□□□□□ -1.13
PRDM4-206ENST00000550659 A2ML1A8K2U0 1454 aa7.98□□□□□ -1.13
PRDM4-206ENST00000550659 ZNF142P52746 1687 aaPredicted RBP7.98□□□□□ -1.13
PRDM4-206ENST00000550659 CCDC144AA2RUR9 1427 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms