RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 FOXP4Q8IVH2 680 aaPredicted RBP10.58□□□□□ -0.72
UBE2N-205ENST00000550657 FANCLQ9NW38 375 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 NHSL1Q5SYE7 1610 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 MAGEB6P1A0A0J9YX57 407 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 FAM205CA6NFA0 338 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 CTIFO43310 598 aaKnown RBP10.58□□□□□ -0.72
UBE2N-205ENST00000550657 MMP1P03956 469 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 IFNAR1P17181 557 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 AKAP17AQ02040 695 aaKnown RBP10.58□□□□□ -0.72
UBE2N-205ENST00000550657 TRMT44Q8IYL2 757 aaKnown RBP10.58□□□□□ -0.72
UBE2N-205ENST00000550657 ZNF654Q8IZM8 581 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 VPS54Q9P1Q0 977 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 HPSEQ9Y251 543 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 SPEF2Q9C093 1822 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 TMEM232C9JQI7 657 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 CUTAO60888 179 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 TOB1P50616 345 aaPredicted RBP10.58□□□□□ -0.72
UBE2N-205ENST00000550657 MYL5Q02045 173 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 PDE4BQ07343 736 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 KRBA2Q6ZNG9 492 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 USP49Q70CQ1 688 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 HOMER1Q86YM7 354 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 FANCBQ8NB91 859 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 WASF1Q92558 559 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 SERTAD1Q9UHV2 236 aa10.58□□□□□ -0.72
UBE2N-205ENST00000550657 ZNF215Q9UL58 517 aaPredicted RBP10.58□□□□□ -0.72
UBE2N-205ENST00000550657 ATRNO75882 1429 aa10.57□□□□□ -0.72
UBE2N-205ENST00000550657 TNKSO95271 1327 aa10.57□□□□□ -0.72
UBE2N-205ENST00000550657 PRR29P0C7W0 189 aa10.57□□□□□ -0.72
UBE2N-205ENST00000550657 EVX2Q03828 476 aa10.57□□□□□ -0.72
UBE2N-205ENST00000550657 ERFEQ4G0M1 354 aa10.57□□□□□ -0.72
UBE2N-205ENST00000550657 SYT10Q6XYQ8 523 aa10.57□□□□□ -0.72
UBE2N-205ENST00000550657 FAM177A1Q8N128 213 aaPredicted RBP10.57□□□□□ -0.72
UBE2N-205ENST00000550657 STAG1Q8WVM7 1258 aa10.57□□□□□ -0.72
UBE2N-205ENST00000550657 BPIFA3Q9BQP9 254 aa10.57□□□□□ -0.72
UBE2N-205ENST00000550657 NTSR2O95665 410 aa10.57□□□□□ -0.72
UBE2N-205ENST00000550657 GNAT2P19087 354 aa10.57□□□□□ -0.72
UBE2N-205ENST00000550657 CDK11BP21127 795 aaKnown RBP10.57□□□□□ -0.72
UBE2N-205ENST00000550657 E4F1Q66K89 784 aaPredicted RBP10.57□□□□□ -0.72
UBE2N-205ENST00000550657 CRACR2BQ8N4Y2 399 aaPredicted RBP10.57□□□□□ -0.72
UBE2N-205ENST00000550657 MARCH10Q8NA82 808 aaPredicted RBP10.57□□□□□ -0.72
UBE2N-205ENST00000550657 TMX1Q9H3N1 280 aa10.57□□□□□ -0.72
UBE2N-205ENST00000550657 NRDCO43847 1150 aa10.56□□□□□ -0.72
UBE2N-205ENST00000550657 NYAP1Q6ZVC0 841 aa10.56□□□□□ -0.72
UBE2N-205ENST00000550657 ANKRD18AQ8IVF6 992 aa10.56□□□□□ -0.72
UBE2N-205ENST00000550657 CCDC150Q8NCX0 1101 aa10.56□□□□□ -0.72
UBE2N-205ENST00000550657 KIF18AQ8NI77 898 aa10.56□□□□□ -0.72
UBE2N-205ENST00000550657 ANKRD7Q92527 254 aa10.56□□□□□ -0.72
UBE2N-205ENST00000550657 OSBPL5Q9H0X9 879 aaPredicted RBP10.56□□□□□ -0.72
UBE2N-205ENST00000550657 HSD3B7Q9H2F3 369 aa10.56□□□□□ -0.72
UBE2N-205ENST00000550657 IMPACTQ9P2X3 320 aa10.56□□□□□ -0.72
UBE2N-205ENST00000550657 TUBE1Q9UJT0 475 aa10.56□□□□□ -0.72
UBE2N-205ENST00000550657 DEXIO95424 95 aa10.56□□□□□ -0.72
UBE2N-205ENST00000550657 BMP6P22004 513 aa10.56□□□□□ -0.72
UBE2N-205ENST00000550657 PARP10Q53GL7 1025 aa10.56□□□□□ -0.72
UBE2N-205ENST00000550657 PPP1R13BQ96KQ4 1090 aa10.56□□□□□ -0.72
UBE2N-205ENST00000550657 TIGD1Q96MW7 591 aa10.56□□□□□ -0.72
UBE2N-205ENST00000550657 RNF41Q9H4P4 317 aaPredicted RBP10.56□□□□□ -0.72
UBE2N-205ENST00000550657 TFCP2L1Q9NZI6 479 aa10.56□□□□□ -0.72
UBE2N-205ENST00000550657 V9GY48 417 aaPredicted RBP10.56□□□□□ -0.72
UBE2N-205ENST00000550657 SLIT2O94813 1529 aa10.56□□□□□ -0.72
UBE2N-205ENST00000550657 KLRK1P26718 216 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 CASP1P29466 404 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 AFMP43652 599 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 KLHL10Q6JEL2 608 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 ESR2Q92731 530 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 DHX58Q96C10 678 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 CDC5LQ99459 802 aaKnown RBP10.55□□□□□ -0.72
UBE2N-205ENST00000550657 MTMR7Q9Y216 660 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 CCDC196A0A1B0GTZ2 297 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 IGSF3O75054 1194 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 PLEKHA8P1O95397 391 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 TOP1P11387 765 aaKnown RBP10.55□□□□□ -0.72
UBE2N-205ENST00000550657 POSTNQ15063 836 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 IFIT1BQ5T764 474 aaKnown RBP10.55□□□□□ -0.72
UBE2N-205ENST00000550657 CSRNP2Q9H175 543 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 GNL3LQ9NVN8 582 aaKnown RBP10.55□□□□□ -0.72
UBE2N-205ENST00000550657 MAN1B1Q9UKM7 699 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 LRP6O75581 1613 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 IKBKBO14920 756 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 NMT2O60551 498 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 CAVIN4Q5BKX8 364 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 NOM1Q5C9Z4 860 aaKnown RBP10.55□□□□□ -0.72
UBE2N-205ENST00000550657 EARS2Q5JPH6 523 aaKnown RBP10.55□□□□□ -0.72
UBE2N-205ENST00000550657 FAM47AQ5JRC9 791 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 STAMQ92783 540 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 AK7Q96M32 723 aa10.55□□□□□ -0.72
UBE2N-205ENST00000550657 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.55□□□□□ -0.72
UBE2N-205ENST00000550657 FBXO2Q9UK22 296 aaPredicted RBP10.55□□□□□ -0.72
UBE2N-205ENST00000550657 DISP2A7MBM2 1401 aa10.54□□□□□ -0.72
UBE2N-205ENST00000550657 COBLO75128 1261 aa10.54□□□□□ -0.72
UBE2N-205ENST00000550657 FMR1Q06787 632 aaKnown RBP eCLIP10.54□□□□□ -0.72
UBE2N-205ENST00000550657 ELF2Q15723 593 aa10.54□□□□□ -0.72
UBE2N-205ENST00000550657 RILPL1Q5EBL4 403 aa10.54□□□□□ -0.72
UBE2N-205ENST00000550657 ENAHQ8N8S7 591 aaPredicted RBP10.54□□□□□ -0.72
UBE2N-205ENST00000550657 CELF1Q92879 486 aaKnown RBP10.54□□□□□ -0.72
UBE2N-205ENST00000550657 SMARCE1Q969G3 411 aa10.54□□□□□ -0.72
UBE2N-205ENST00000550657 NFE2L3Q9Y4A8 694 aa10.54□□□□□ -0.72
UBE2N-205ENST00000550657 PNPLA7Q6ZV29 1317 aa10.54□□□□□ -0.72
UBE2N-205ENST00000550657 STK36Q9NRP7 1315 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms