RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	AK9	Q5TCS8	1911 aa		13.57	□□□□□ -0.24
RAB5B-208	ENST00000550283	CYP2D7	A0A087X1C5	515 aa		13.57	□□□□□ -0.24
RAB5B-208	ENST00000550283	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
RAB5B-208	ENST00000550283	GLRX3	O76003	335 aa	Known RBP	13.57	□□□□□ -0.24
RAB5B-208	ENST00000550283	HSPA8	P11142	646 aa	Known RBP	13.57	□□□□□ -0.24
RAB5B-208	ENST00000550283	PLCD1	P51178	756 aa		13.57	□□□□□ -0.24
RAB5B-208	ENST00000550283	UBE3C	Q15386	1083 aa		13.57	□□□□□ -0.24
RAB5B-208	ENST00000550283	OTUD5	Q96G74	571 aa		13.57	□□□□□ -0.24
RAB5B-208	ENST00000550283	GPATCH3	Q96I76	525 aa		13.57	□□□□□ -0.24
RAB5B-208	ENST00000550283	MS4A4A	Q96JQ5	239 aa		13.57	□□□□□ -0.24
RAB5B-208	ENST00000550283	SPDYE5	A6NIY4	337 aa		13.56	□□□□□ -0.24
RAB5B-208	ENST00000550283	FOXP2	O15409	715 aa		13.56	□□□□□ -0.24
RAB5B-208	ENST00000550283	RNF113A	O15541	343 aa	Known RBP	13.56	□□□□□ -0.24
RAB5B-208	ENST00000550283	DCAF15	Q66K64	600 aa		13.56	□□□□□ -0.24
RAB5B-208	ENST00000550283	CCDC129	Q6ZRS4	1044 aa		13.56	□□□□□ -0.24
RAB5B-208	ENST00000550283	NOL10	Q9BSC4	688 aa	Known RBP	13.56	□□□□□ -0.24
RAB5B-208	ENST00000550283	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.56	□□□□□ -0.24
RAB5B-208	ENST00000550283	RNF186	Q9NXI6	227 aa		13.56	□□□□□ -0.24
RAB5B-208	ENST00000550283	LAMB1	P07942	1786 aa		13.55	□□□□□ -0.24
RAB5B-208	ENST00000550283	NAV1	Q8NEY1	1877 aa		13.55	□□□□□ -0.24
RAB5B-208	ENST00000550283	IRF6	O14896	467 aa		13.55	□□□□□ -0.24
RAB5B-208	ENST00000550283	IGSF3	O75054	1194 aa		13.55	□□□□□ -0.24
RAB5B-208	ENST00000550283	PLCG2	P16885	1265 aa		13.55	□□□□□ -0.24
RAB5B-208	ENST00000550283	USP5	P45974	858 aa		13.55	□□□□□ -0.24
RAB5B-208	ENST00000550283	LBX1	P52954	281 aa		13.55	□□□□□ -0.24
RAB5B-208	ENST00000550283	MLLT1	Q03111	559 aa	Predicted RBP	13.55	□□□□□ -0.24
RAB5B-208	ENST00000550283	DGKZ	Q13574	1117 aa		13.55	□□□□□ -0.24
RAB5B-208	ENST00000550283	MOGS	Q13724	837 aa		13.55	□□□□□ -0.24
RAB5B-208	ENST00000550283	NOL9	Q5SY16	702 aa	Known RBP	13.55	□□□□□ -0.24
RAB5B-208	ENST00000550283	METTL16	Q86W50	562 aa	Known RBP	13.55	□□□□□ -0.24
RAB5B-208	ENST00000550283	BRI3BP	Q8WY22	251 aa		13.55	□□□□□ -0.24
RAB5B-208	ENST00000550283	STRBP	Q96SI9	672 aa	Known RBP	13.55	□□□□□ -0.24
RAB5B-208	ENST00000550283	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
RAB5B-208	ENST00000550283	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.55	□□□□□ -0.24
RAB5B-208	ENST00000550283	ERC2	O15083	957 aa		13.54	□□□□□ -0.24
RAB5B-208	ENST00000550283	TRPA1	O75762	1119 aa		13.54	□□□□□ -0.24
RAB5B-208	ENST00000550283	GSPT1	P15170	499 aa	Known RBP	13.54	□□□□□ -0.24
RAB5B-208	ENST00000550283	TM4SF4	P48230	202 aa		13.54	□□□□□ -0.24
RAB5B-208	ENST00000550283	MAP2K1	Q02750	393 aa	Predicted RBP	13.54	□□□□□ -0.24
RAB5B-208	ENST00000550283	ZMYM1	Q5SVZ6	1142 aa		13.54	□□□□□ -0.24
RAB5B-208	ENST00000550283	SLC44A5	Q8NCS7	719 aa		13.54	□□□□□ -0.24
RAB5B-208	ENST00000550283	DYNLL2	Q96FJ2	89 aa		13.54	□□□□□ -0.24
RAB5B-208	ENST00000550283	FAM227B	Q96M60	508 aa		13.54	□□□□□ -0.24
RAB5B-208	ENST00000550283	FSD1	Q9BTV5	496 aa		13.54	□□□□□ -0.24
RAB5B-208	ENST00000550283	OSBPL3	Q9H4L5	887 aa		13.54	□□□□□ -0.24
RAB5B-208	ENST00000550283	MYH1	P12882	1939 aa		13.54	□□□□□ -0.24
RAB5B-208	ENST00000550283	PHIP	Q8WWQ0	1821 aa		13.53	□□□□□ -0.24
RAB5B-208	ENST00000550283	GSG1L2	A8MUP6	293 aa		13.53	□□□□□ -0.24
RAB5B-208	ENST00000550283	TBC1D12	O60347	775 aa		13.53	□□□□□ -0.24
RAB5B-208	ENST00000550283	GDF11	O95390	407 aa		13.53	□□□□□ -0.24
RAB5B-208	ENST00000550283	TBC1D8	O95759	1140 aa		13.53	□□□□□ -0.24
RAB5B-208	ENST00000550283	ZBTB48	P10074	688 aa	Predicted RBP	13.53	□□□□□ -0.24
RAB5B-208	ENST00000550283	PTPRA	P18433	802 aa		13.53	□□□□□ -0.24
RAB5B-208	ENST00000550283	APPBP2	Q92624	585 aa		13.53	□□□□□ -0.24
RAB5B-208	ENST00000550283	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.53	□□□□□ -0.24
RAB5B-208	ENST00000550283	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
RAB5B-208	ENST00000550283	CSAD	Q9Y600	493 aa		13.53	□□□□□ -0.24
RAB5B-208	ENST00000550283	DOCK1	Q14185	1865 aa		13.53	□□□□□ -0.24
RAB5B-208	ENST00000550283	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.52	□□□□□ -0.24
RAB5B-208	ENST00000550283		A0A0D9SFI3	127 aa		13.52	□□□□□ -0.25
RAB5B-208	ENST00000550283	TESPA1	A2RU30	521 aa	Predicted RBP	13.52	□□□□□ -0.25
RAB5B-208	ENST00000550283	UNCX	A6NJT0	531 aa		13.52	□□□□□ -0.25
RAB5B-208	ENST00000550283	GPAA1	O43292	621 aa		13.52	□□□□□ -0.25
RAB5B-208	ENST00000550283	SHMT1	P34896	483 aa		13.52	□□□□□ -0.25
RAB5B-208	ENST00000550283	CAP1	Q01518	475 aa		13.52	□□□□□ -0.25
RAB5B-208	ENST00000550283	GABPA	Q06546	454 aa		13.52	□□□□□ -0.25
RAB5B-208	ENST00000550283	VPS53	Q5VIR6	699 aa		13.52	□□□□□ -0.25
RAB5B-208	ENST00000550283	ERO1B	Q86YB8	467 aa		13.52	□□□□□ -0.25
RAB5B-208	ENST00000550283	IFNL1	Q8IU54	200 aa		13.52	□□□□□ -0.25
RAB5B-208	ENST00000550283	SCYL3	Q8IZE3	742 aa		13.52	□□□□□ -0.25
RAB5B-208	ENST00000550283	FAM43A	Q8N2R8	423 aa		13.52	□□□□□ -0.25
RAB5B-208	ENST00000550283	ABHD8	Q96I13	439 aa		13.52	□□□□□ -0.25
RAB5B-208	ENST00000550283	IL25	Q9H293	177 aa		13.52	□□□□□ -0.25
RAB5B-208	ENST00000550283	MCM9	Q9NXL9	1143 aa		13.52	□□□□□ -0.25
RAB5B-208	ENST00000550283	PI4KB	Q9UBF8	816 aa		13.52	□□□□□ -0.25
RAB5B-208	ENST00000550283	SLC4A4	Q9Y6R1	1079 aa		13.52	□□□□□ -0.25
RAB5B-208	ENST00000550283	CAP2	P40123	477 aa		13.51	□□□□□ -0.25
RAB5B-208	ENST00000550283	PPIL2	Q13356	520 aa		13.51	□□□□□ -0.25
RAB5B-208	ENST00000550283	CTR9	Q6PD62	1173 aa		13.51	□□□□□ -0.25
RAB5B-208	ENST00000550283	TMED8	Q6PL24	325 aa	Predicted RBP	13.51	□□□□□ -0.25
RAB5B-208	ENST00000550283	AIDA	Q96BJ3	306 aa		13.51	□□□□□ -0.25
RAB5B-208	ENST00000550283	HOOK2	Q96ED9	719 aa		13.51	□□□□□ -0.25
RAB5B-208	ENST00000550283	DHX36	Q9H2U1	1008 aa	Known RBP	13.51	□□□□□ -0.25
RAB5B-208	ENST00000550283	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.51	□□□□□ -0.25
RAB5B-208	ENST00000550283	TACC3	Q9Y6A5	838 aa		13.51	□□□□□ -0.25
RAB5B-208	ENST00000550283	ZHX2	Q9Y6X8	837 aa		13.51	□□□□□ -0.25
RAB5B-208	ENST00000550283	ATAD5	Q96QE3	1844 aa		13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	CCL15-CCL14	A0A0B4J2E2	113 aa		13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	MANSC4	A6NHS7	340 aa	Predicted RBP	13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	BTBD19	C9JJ37	291 aa		13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	USP17L12	C9JPN9	530 aa		13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	USP17L21	D6R901	530 aa		13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	CTNND1	O60716	968 aa	Known RBP	13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	GUCY1A2	P33402	732 aa		13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	CTCF	P49711	727 aa	Predicted RBP	13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	NMI	Q13287	307 aa	Predicted RBP	13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	CCL15	Q16663	113 aa		13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	ZSCAN25	Q6NSZ9	544 aa		13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	TATDN1	Q6P1N9	297 aa		13.5	□□□□□ -0.25
RAB5B-208	ENST00000550283	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms