RNA–Protein interactions for RNA: ENST00000550023.5

KRR1-203, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-203ENST00000550023 C22orf23Q9BZE7 217 aa6.59□□□□□ -1.35
KRR1-203ENST00000550023 C7orf69Q9H7B7 122 aa6.59□□□□□ -1.35
KRR1-203ENST00000550023 SRA1Q9HD15 236 aaKnown RBP6.59□□□□□ -1.35
KRR1-203ENST00000550023 GOPCQ9HD26 462 aa6.59□□□□□ -1.35
KRR1-203ENST00000550023 SCHIP1Q9P0W5 487 aaPredicted RBP6.59□□□□□ -1.35
KRR1-203ENST00000550023 LAS1LQ9Y4W2 734 aaKnown RBP6.59□□□□□ -1.35
KRR1-203ENST00000550023 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.59□□□□□ -1.35
KRR1-203ENST00000550023 RGPD8O14715 1765 aaPredicted RBP6.59□□□□□ -1.35
KRR1-203ENST00000550023 NCANO14594 1321 aa6.58□□□□□ -1.36
KRR1-203ENST00000550023 PRRG2O14669 202 aa6.58□□□□□ -1.36
KRR1-203ENST00000550023 EPB41L2O43491 1005 aaKnown RBP6.58□□□□□ -1.36
KRR1-203ENST00000550023 HMMRO75330 724 aa6.58□□□□□ -1.36
KRR1-203ENST00000550023 DDIT3P35638 169 aa6.58□□□□□ -1.36
KRR1-203ENST00000550023 KRTAP19-4Q3LI73 84 aa6.58□□□□□ -1.36
KRR1-203ENST00000550023 CEP85Q6P2H3 762 aa6.58□□□□□ -1.36
KRR1-203ENST00000550023 TRIM42Q8IWZ5 723 aa6.58□□□□□ -1.36
KRR1-203ENST00000550023 AGGF1Q8N302 714 aaeCLIP6.58□□□□□ -1.36
KRR1-203ENST00000550023 KCNH5Q8NCM2 988 aa6.58□□□□□ -1.36
KRR1-203ENST00000550023 NGDNQ8NEJ9 315 aaKnown RBP6.58□□□□□ -1.36
KRR1-203ENST00000550023 C7orf43Q8WVR3 580 aa6.58□□□□□ -1.36
KRR1-203ENST00000550023 HSH2DQ96JZ2 352 aa6.58□□□□□ -1.36
KRR1-203ENST00000550023 FBXL18Q96ME1 805 aa6.58□□□□□ -1.36
KRR1-203ENST00000550023 SLC26A8Q96RN1 970 aa6.58□□□□□ -1.36
KRR1-203ENST00000550023 DCTPP1Q9H773 170 aa6.58□□□□□ -1.36
KRR1-203ENST00000550023 ISY1Q9ULR0 285 aaKnown RBP6.58□□□□□ -1.36
KRR1-203ENST00000550023 SIPA1L3O60292 1781 aaPredicted RBP6.58□□□□□ -1.36
KRR1-203ENST00000550023 SETD1BQ9UPS6 1966 aaKnown RBP6.58□□□□□ -1.36
KRR1-203ENST00000550023 PKD1L3Q7Z443 1732 aa6.57□□□□□ -1.36
KRR1-203ENST00000550023 SERTM1A2A2V5 107 aa6.57□□□□□ -1.36
KRR1-203ENST00000550023 ZNF865P0CJ78 1059 aaPredicted RBP6.57□□□□□ -1.36
KRR1-203ENST00000550023 PTMSP20962 102 aa6.57□□□□□ -1.36
KRR1-203ENST00000550023 UVSSAQ2YD98 709 aa6.57□□□□□ -1.36
KRR1-203ENST00000550023 ANKLE2Q86XL3 938 aa6.57□□□□□ -1.36
KRR1-203ENST00000550023 HSCBQ8IWL3 235 aa6.57□□□□□ -1.36
KRR1-203ENST00000550023 TP53INP2Q8IXH6 220 aa6.57□□□□□ -1.36
KRR1-203ENST00000550023 SIRT2Q8IXJ6 389 aa6.57□□□□□ -1.36
KRR1-203ENST00000550023 SHKBP1Q8TBC3 707 aa6.57□□□□□ -1.36
KRR1-203ENST00000550023 RTF1Q92541 710 aaKnown RBP6.57□□□□□ -1.36
KRR1-203ENST00000550023 TTC9Q92623 222 aa6.57□□□□□ -1.36
KRR1-203ENST00000550023 UTP4Q969X6 686 aaKnown RBP6.57□□□□□ -1.36
KRR1-203ENST00000550023 IL17RAQ96F46 866 aa6.57□□□□□ -1.36
KRR1-203ENST00000550023 UBL7Q96S82 380 aaPredicted RBP6.57□□□□□ -1.36
KRR1-203ENST00000550023 TSPYL4Q9UJ04 414 aa6.57□□□□□ -1.36
KRR1-203ENST00000550023 NDUFB9Q9Y6M9 179 aa6.57□□□□□ -1.36
KRR1-203ENST00000550023 C1orf167Q5SNV9 1468 aa6.57□□□□□ -1.36
KRR1-203ENST00000550023 PXDNQ92626 1479 aa6.57□□□□□ -1.36
KRR1-203ENST00000550023 GLI3P10071 1580 aa6.57□□□□□ -1.36
KRR1-203ENST00000550023 SALL3Q9BXA9 1300 aa6.56□□□□□ -1.36
KRR1-203ENST00000550023 HMX2A2RU54 273 aa6.56□□□□□ -1.36
KRR1-203ENST00000550023 FAM83GA6ND36 823 aa6.56□□□□□ -1.36
KRR1-203ENST00000550023 GNAT3A8MTJ3 354 aa6.56□□□□□ -1.36
KRR1-203ENST00000550023 AMPHP49418 695 aa6.56□□□□□ -1.36
KRR1-203ENST00000550023 MTHFSDQ2M296 383 aaKnown RBP6.56□□□□□ -1.36
KRR1-203ENST00000550023 MAP7D1Q3KQU3 841 aa6.56□□□□□ -1.36
KRR1-203ENST00000550023 PERM1Q5SV97 790 aa6.56□□□□□ -1.36
KRR1-203ENST00000550023 TTC22Q5TAA0 569 aa6.56□□□□□ -1.36
KRR1-203ENST00000550023 MAP4K3Q8IVH8 894 aa6.56□□□□□ -1.36
KRR1-203ENST00000550023 IP6K1Q92551 441 aa6.56□□□□□ -1.36
KRR1-203ENST00000550023 LNPKQ9C0E8 428 aa6.56□□□□□ -1.36
KRR1-203ENST00000550023 HEG1Q9ULI3 1381 aa6.56□□□□□ -1.36
KRR1-203ENST00000550023 GNAI3P08754 354 aa6.55□□□□□ -1.36
KRR1-203ENST00000550023 GSPT1P15170 499 aaKnown RBP6.55□□□□□ -1.36
KRR1-203ENST00000550023 NFKB1P19838 968 aa6.55□□□□□ -1.36
KRR1-203ENST00000550023 FBLN1P23142 703 aa6.55□□□□□ -1.36
KRR1-203ENST00000550023 CEBPAP49715 358 aaPredicted RBP6.55□□□□□ -1.36
KRR1-203ENST00000550023 MFAP1P55081 439 aaKnown RBP6.55□□□□□ -1.36
KRR1-203ENST00000550023 RABEP1Q15276 862 aa6.55□□□□□ -1.36
KRR1-203ENST00000550023 C1orf53Q5VUE5 145 aa6.55□□□□□ -1.36
KRR1-203ENST00000550023 CCDC30Q5VVM6 783 aa6.55□□□□□ -1.36
KRR1-203ENST00000550023 MCM10Q7L590 875 aa6.55□□□□□ -1.36
KRR1-203ENST00000550023 STK31Q9BXU1 1019 aa6.55□□□□□ -1.36
KRR1-203ENST00000550023 BCL11AQ9H165 835 aa6.55□□□□□ -1.36
KRR1-203ENST00000550023 CHMP5Q9NZZ3 219 aa6.55□□□□□ -1.36
KRR1-203ENST00000550023 TNS3Q68CZ2 1445 aa6.55□□□□□ -1.36
KRR1-203ENST00000550023 LAMB4A4D0S4 1761 aa6.54□□□□□ -1.36
KRR1-203ENST00000550023 B8ZZF3 427 aa6.54□□□□□ -1.36
KRR1-203ENST00000550023 FARP2O94887 1054 aaPredicted RBP6.54□□□□□ -1.36
KRR1-203ENST00000550023 FLIIQ13045 1269 aa6.54□□□□□ -1.36
KRR1-203ENST00000550023 CCINQ13939 588 aa6.54□□□□□ -1.36
KRR1-203ENST00000550023 AMOTQ4VCS5 1084 aa6.54□□□□□ -1.36
KRR1-203ENST00000550023 LILRA6Q6PI73 481 aa6.54□□□□□ -1.36
KRR1-203ENST00000550023 CASC1Q6TDU7 716 aa6.54□□□□□ -1.36
KRR1-203ENST00000550023 CLEC17AQ6ZS10 378 aa6.54□□□□□ -1.36
KRR1-203ENST00000550023 ARMC10Q8N2F6 343 aa6.54□□□□□ -1.36
KRR1-203ENST00000550023 GIMAP7Q8NHV1 300 aa6.54□□□□□ -1.36
KRR1-203ENST00000550023 CHMP3Q9Y3E7 222 aa6.54□□□□□ -1.36
KRR1-203ENST00000550023 CPDO75976 1380 aa6.54□□□□□ -1.36
KRR1-203ENST00000550023 COL15A1P39059 1388 aa6.54□□□□□ -1.36
KRR1-203ENST00000550023 APBB1O00213 710 aa6.53□□□□□ -1.36
KRR1-203ENST00000550023 REC8O95072 547 aa6.53□□□□□ -1.36
KRR1-203ENST00000550023 GNAI2P04899 355 aa6.53□□□□□ -1.36
KRR1-203ENST00000550023 DCTN1Q14203 1278 aa6.53□□□□□ -1.36
KRR1-203ENST00000550023 SLC9A9Q8IVB4 645 aa6.53□□□□□ -1.36
KRR1-203ENST00000550023 PLEKHM2Q8IWE5 1019 aa6.53□□□□□ -1.36
KRR1-203ENST00000550023 SUSD3Q96L08 255 aa6.53□□□□□ -1.36
KRR1-203ENST00000550023 KIF2CQ99661 725 aa6.53□□□□□ -1.36
KRR1-203ENST00000550023 MEIS3Q99687 375 aa6.53□□□□□ -1.36
KRR1-203ENST00000550023 GSX2Q9BZM3 304 aa6.53□□□□□ -1.36
KRR1-203ENST00000550023 SRCIN1Q9C0H9 1055 aa6.53□□□□□ -1.36
KRR1-203ENST00000550023 PIM2Q9P1W9 311 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms