RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 PI4KBQ9UBF8 816 aa20.55■□□□□ 0.88
LETMD1-220ENST00000549686 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.55■□□□□ 0.88
LETMD1-220ENST00000549686 DDX60LQ5H9U9 1706 aaKnown RBP20.54■□□□□ 0.88
LETMD1-220ENST00000549686 IQCA1LA6NCM1 817 aa20.54■□□□□ 0.88
LETMD1-220ENST00000549686 PLCD1P51178 756 aa20.54■□□□□ 0.88
LETMD1-220ENST00000549686 CACNB3P54284 484 aa20.54■□□□□ 0.88
LETMD1-220ENST00000549686 EXOSC10Q01780 885 aaKnown RBP20.54■□□□□ 0.88
LETMD1-220ENST00000549686 APOBEC3FQ8IUX4 373 aaKnown RBP20.54■□□□□ 0.88
LETMD1-220ENST00000549686 FOXP4Q8IVH2 680 aaPredicted RBP20.54■□□□□ 0.88
LETMD1-220ENST00000549686 SERPINB13Q9UIV8 391 aa20.54■□□□□ 0.88
LETMD1-220ENST00000549686 FOCADQ5VW36 1801 aa20.54■□□□□ 0.88
LETMD1-220ENST00000549686 NEDD4P46934 1319 aa20.53■□□□□ 0.88
LETMD1-220ENST00000549686 TCP10L2B9ZVM9 353 aa20.53■□□□□ 0.88
LETMD1-220ENST00000549686 EPS15P42566 896 aa20.53■□□□□ 0.88
LETMD1-220ENST00000549686 TCP10Q12799 353 aa20.53■□□□□ 0.88
LETMD1-220ENST00000549686 ZSCAN29Q8IWY8 852 aaPredicted RBP20.53■□□□□ 0.88
LETMD1-220ENST00000549686 TMEM87BQ96K49 555 aa20.53■□□□□ 0.88
LETMD1-220ENST00000549686 MKNK2Q9HBH9 465 aa20.53■□□□□ 0.88
LETMD1-220ENST00000549686 TOMM22Q9NS69 142 aa20.53■□□□□ 0.88
LETMD1-220ENST00000549686 HACL1Q9UJ83 578 aa20.53■□□□□ 0.88
LETMD1-220ENST00000549686 LAMB1P07942 1786 aa20.52■□□□□ 0.88
LETMD1-220ENST00000549686 B4E1Z4 1266 aa20.52■□□□□ 0.88
LETMD1-220ENST00000549686 GABPAQ06546 454 aa20.52■□□□□ 0.88
LETMD1-220ENST00000549686 SART3Q15020 963 aaKnown RBP20.52■□□□□ 0.88
LETMD1-220ENST00000549686 USP50Q70EL3 339 aaPredicted RBP20.52■□□□□ 0.88
LETMD1-220ENST00000549686 ECM29Q5VYK3 1845 aa20.52■□□□□ 0.88
LETMD1-220ENST00000549686 PITPNM2Q9BZ72 1349 aa20.52■□□□□ 0.87
LETMD1-220ENST00000549686 PRC1O43663 620 aa20.51■□□□□ 0.87
LETMD1-220ENST00000549686 KDM4AO75164 1064 aa20.51■□□□□ 0.87
LETMD1-220ENST00000549686 EGFRP00533 1210 aa20.51■□□□□ 0.87
LETMD1-220ENST00000549686 FGD1P98174 961 aa20.51■□□□□ 0.87
LETMD1-220ENST00000549686 CCDC178Q5BJE1 867 aa20.51■□□□□ 0.87
LETMD1-220ENST00000549686 RRP12Q5JTH9 1297 aaKnown RBP20.51■□□□□ 0.87
LETMD1-220ENST00000549686 METTL16Q86W50 562 aaKnown RBP20.51■□□□□ 0.87
LETMD1-220ENST00000549686 ZNF444Q8N0Y2 327 aaPredicted RBP20.51■□□□□ 0.87
LETMD1-220ENST00000549686 TRPM4Q8TD43 1214 aa20.51■□□□□ 0.87
LETMD1-220ENST00000549686 TRIM34Q9BYJ4 488 aa20.51■□□□□ 0.87
LETMD1-220ENST00000549686 DAXXQ9UER7 740 aaPredicted RBP20.51■□□□□ 0.87
LETMD1-220ENST00000549686 HERC5Q9UII4 1024 aaKnown RBP20.51■□□□□ 0.87
LETMD1-220ENST00000549686 PPP2R3BQ9Y5P8 575 aa20.51■□□□□ 0.87
LETMD1-220ENST00000549686 CDK5RAP2Q96SN8 1893 aa20.51■□□□□ 0.87
LETMD1-220ENST00000549686 BAZ2AQ9UIF9 1905 aaKnown RBP20.51■□□□□ 0.87
LETMD1-220ENST00000549686 CNTNAP1P78357 1384 aa20.5■□□□□ 0.87
LETMD1-220ENST00000549686 CPA1P15085 419 aa20.5■□□□□ 0.87
LETMD1-220ENST00000549686 CDK8P49336 464 aa20.5■□□□□ 0.87
LETMD1-220ENST00000549686 AK2P54819 239 aa20.5■□□□□ 0.87
LETMD1-220ENST00000549686 IQCA1Q86XH1 822 aa20.5■□□□□ 0.87
LETMD1-220ENST00000549686 ZFPM1Q8IX07 1006 aa20.5■□□□□ 0.87
LETMD1-220ENST00000549686 CRACR2BQ8N4Y2 399 aaPredicted RBP20.5■□□□□ 0.87
LETMD1-220ENST00000549686 DYNLL2Q96FJ2 89 aa20.5■□□□□ 0.87
LETMD1-220ENST00000549686 IPO9Q96P70 1041 aaKnown RBP20.5■□□□□ 0.87
LETMD1-220ENST00000549686 AGXT2Q9BYV1 514 aa20.5■□□□□ 0.87
LETMD1-220ENST00000549686 TBC1D2Q9BYX2 928 aa20.5■□□□□ 0.87
LETMD1-220ENST00000549686 ZSWIM5Q9P217 1185 aa20.5■□□□□ 0.87
LETMD1-220ENST00000549686 TACC3Q9Y6A5 838 aa20.5■□□□□ 0.87
LETMD1-220ENST00000549686 ERICH2A1L162 156 aa20.49■□□□□ 0.87
LETMD1-220ENST00000549686 DDTLA6NHG4 134 aaPredicted RBP20.49■□□□□ 0.87
LETMD1-220ENST00000549686 K7ELQ4 463 aaPredicted RBP20.49■□□□□ 0.87
LETMD1-220ENST00000549686 RANBP6O60518 1105 aaKnown RBP20.49■□□□□ 0.87
LETMD1-220ENST00000549686 SLC4A8Q2Y0W8 1093 aa20.49■□□□□ 0.87
LETMD1-220ENST00000549686 Q6ZUG5 572 aa20.49■□□□□ 0.87
LETMD1-220ENST00000549686 SH3BP5LQ7L8J4 393 aa20.49■□□□□ 0.87
LETMD1-220ENST00000549686 ZC3H15Q8WU90 426 aaKnown RBP20.49■□□□□ 0.87
LETMD1-220ENST00000549686 HOOK2Q96ED9 719 aa20.49■□□□□ 0.87
LETMD1-220ENST00000549686 ZSCAN31Q96LW9 406 aaPredicted RBP20.49■□□□□ 0.87
LETMD1-220ENST00000549686 CSRNP1Q96S65 589 aa20.49■□□□□ 0.87
LETMD1-220ENST00000549686 UBAC1Q9BSL1 405 aa20.49■□□□□ 0.87
LETMD1-220ENST00000549686 LIMCH1Q9UPQ0 1083 aa20.49■□□□□ 0.87
LETMD1-220ENST00000549686 TBC1D12O60347 775 aa20.48■□□□□ 0.87
LETMD1-220ENST00000549686 EPHX2P34913 555 aa20.48■□□□□ 0.87
LETMD1-220ENST00000549686 ANTXR2P58335 489 aa20.48■□□□□ 0.87
LETMD1-220ENST00000549686 RASA3Q14644 834 aa20.48■□□□□ 0.87
LETMD1-220ENST00000549686 STK11IPQ8N1F8 1099 aa20.48■□□□□ 0.87
LETMD1-220ENST00000549686 TMTC2Q8N394 836 aa20.48■□□□□ 0.87
LETMD1-220ENST00000549686 CCDC17Q96LX7 622 aa20.48■□□□□ 0.87
LETMD1-220ENST00000549686 INCENPQ9NQS7 918 aa20.48■□□□□ 0.87
LETMD1-220ENST00000549686 MYH1P12882 1939 aa20.47■□□□□ 0.87
LETMD1-220ENST00000549686 TSPY2A6NKD2 308 aa20.47■□□□□ 0.87
LETMD1-220ENST00000549686 SMIM22K7EJ46 135 aa20.47■□□□□ 0.87
LETMD1-220ENST00000549686 PRDM1O75626 825 aa20.47■□□□□ 0.87
LETMD1-220ENST00000549686 HIRAP54198 1017 aaPredicted RBP20.47■□□□□ 0.87
LETMD1-220ENST00000549686 EVX2Q03828 476 aa20.47■□□□□ 0.87
LETMD1-220ENST00000549686 PPP4R3BQ5MIZ7 849 aa20.47■□□□□ 0.87
LETMD1-220ENST00000549686 ANGEL2Q5VTE6 544 aaKnown RBP20.47■□□□□ 0.87
LETMD1-220ENST00000549686 CYB5R4Q7L1T6 521 aa20.47■□□□□ 0.87
LETMD1-220ENST00000549686 PNMA8AQ86V59 439 aaPredicted RBP20.47■□□□□ 0.87
LETMD1-220ENST00000549686 SH2B1Q9NRF2 756 aaPredicted RBP20.47■□□□□ 0.87
LETMD1-220ENST00000549686 TCP11L1Q9NUJ3 509 aa20.47■□□□□ 0.87
LETMD1-220ENST00000549686 GGA3Q9NZ52 723 aa20.47■□□□□ 0.87
LETMD1-220ENST00000549686 ANGEL1Q9UNK9 670 aaKnown RBP20.47■□□□□ 0.87
LETMD1-220ENST00000549686 SH2B2O14492 632 aaPredicted RBP20.46■□□□□ 0.87
LETMD1-220ENST00000549686 IFIT3O14879 490 aaKnown RBP20.46■□□□□ 0.87
LETMD1-220ENST00000549686 CD2BP2O95400 341 aaKnown RBP20.46■□□□□ 0.87
LETMD1-220ENST00000549686 TSPY3P0CV98 308 aa20.46■□□□□ 0.87
LETMD1-220ENST00000549686 TSPY8P0CW00 308 aa20.46■□□□□ 0.87
LETMD1-220ENST00000549686 RASA1P20936 1047 aa20.46■□□□□ 0.87
LETMD1-220ENST00000549686 LIFRP42702 1097 aa20.46■□□□□ 0.87
LETMD1-220ENST00000549686 TOB2Q14106 344 aaPredicted RBP20.46■□□□□ 0.87
LETMD1-220ENST00000549686 CHMP4CQ96CF2 233 aa20.46■□□□□ 0.87
LETMD1-220ENST00000549686 TCEANC2Q96MN5 208 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms