RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 PATL2C9JE40 543 aaKnown RBP13.67□□□□□ -0.22
RAPGEF3-219ENST00000549151 KIF20AO95235 890 aa13.67□□□□□ -0.22
RAPGEF3-219ENST00000549151 TOB1P50616 345 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF3-219ENST00000549151 BCAMP50895 628 aa13.67□□□□□ -0.22
RAPGEF3-219ENST00000549151 SMARCE1Q969G3 411 aa13.67□□□□□ -0.22
RAPGEF3-219ENST00000549151 INTS13Q9NVM9 706 aa13.67□□□□□ -0.22
RAPGEF3-219ENST00000549151 LRP2BPQ9P2M1 347 aa13.67□□□□□ -0.22
RAPGEF3-219ENST00000549151 FAM205CA6NFA0 338 aa13.67□□□□□ -0.22
RAPGEF3-219ENST00000549151 FANCGO15287 622 aa13.67□□□□□ -0.22
RAPGEF3-219ENST00000549151 SEC31AO94979 1220 aaKnown RBP13.67□□□□□ -0.22
RAPGEF3-219ENST00000549151 PUM3Q15397 648 aaKnown RBP13.67□□□□□ -0.22
RAPGEF3-219ENST00000549151 AKNAD1Q5T1N1 836 aa13.67□□□□□ -0.22
RAPGEF3-219ENST00000549151 DHX58Q96C10 678 aa13.67□□□□□ -0.22
RAPGEF3-219ENST00000549151 BAG1Q99933 345 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF3-219ENST00000549151 CARD10Q9BWT7 1032 aa13.67□□□□□ -0.22
RAPGEF3-219ENST00000549151 PLA2G12BQ9BX93 195 aa13.67□□□□□ -0.22
RAPGEF3-219ENST00000549151 PPP2R2CQ9Y2T4 447 aa13.67□□□□□ -0.22
RAPGEF3-219ENST00000549151 WDR19Q8NEZ3 1342 aa13.67□□□□□ -0.22
RAPGEF3-219ENST00000549151 BAZ2BQ9UIF8 2168 aaKnown RBP13.67□□□□□ -0.22
RAPGEF3-219ENST00000549151 SART3Q15020 963 aaKnown RBP13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 NKX1-1Q15270 411 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 DZIP3Q86Y13 1208 aaKnown RBP13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 VGLL2Q8N8G2 317 aa13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 SDR42E1Q8WUS8 393 aa13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 STAMQ92783 540 aa13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 HOOK1Q9UJC3 728 aaKnown RBP13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 NUP188Q5SRE5 1749 aa13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 ZNF142P52746 1687 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 TCRBV5S4A2TA0A5A2 114 aa13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 POLR3GO15318 223 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 PRDM1O75626 825 aa13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 MMP1P03956 469 aa13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 SLFN14P0C7P3 912 aa13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 UQCRFS1P1P0C7P4 283 aa13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 TEX35Q5T0J7 233 aa13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 TOGARAM2Q6ZUX3 1019 aa13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 LPIN2Q92539 896 aa13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 PDE8AO60658 829 aa13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 FMNL1O95466 1100 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 SLC5A1P13866 664 aa13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 TRIM65Q6PJ69 517 aa13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 UBAC1Q9BSL1 405 aa13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 PKD1L3Q7Z443 1732 aa13.66□□□□□ -0.22
RAPGEF3-219ENST00000549151 GSG1L2A8MUP6 293 aa13.65□□□□□ -0.22
RAPGEF3-219ENST00000549151 CCP110O43303 1012 aa13.65□□□□□ -0.22
RAPGEF3-219ENST00000549151 GABPB1Q06547 395 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF3-219ENST00000549151 REXO1L1PQ8IX06 675 aa13.65□□□□□ -0.22
RAPGEF3-219ENST00000549151 SMYD4Q8IYR2 804 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF3-219ENST00000549151 WDR24Q96S15 920 aa13.65□□□□□ -0.22
RAPGEF3-219ENST00000549151 TEX13AQ9BXU3 409 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF3-219ENST00000549151 VPS54Q9P1Q0 977 aa13.65□□□□□ -0.22
RAPGEF3-219ENST00000549151 ZSCAN12O43309 604 aa13.65□□□□□ -0.22
RAPGEF3-219ENST00000549151 AKAP17AQ02040 695 aaKnown RBP13.65□□□□□ -0.22
RAPGEF3-219ENST00000549151 MTF1Q14872 753 aa13.65□□□□□ -0.22
RAPGEF3-219ENST00000549151 TERF2Q15554 542 aa13.65□□□□□ -0.22
RAPGEF3-219ENST00000549151 CCDC93Q567U6 631 aa13.65□□□□□ -0.22
RAPGEF3-219ENST00000549151 SGMS1Q86VZ5 419 aa13.65□□□□□ -0.22
RAPGEF3-219ENST00000549151 SLC4A9Q96Q91 983 aa13.65□□□□□ -0.22
RAPGEF3-219ENST00000549151 IRX2Q9BZI1 471 aaPredicted RBP13.65□□□□□ -0.22
RAPGEF3-219ENST00000549151 NACAP1Q9BZK3 213 aa13.65□□□□□ -0.22
RAPGEF3-219ENST00000549151 KCND1Q9NSA2 647 aa13.65□□□□□ -0.22
RAPGEF3-219ENST00000549151 SPEF2Q9C093 1822 aa13.65□□□□□ -0.22
RAPGEF3-219ENST00000549151 IFNAR1P17181 557 aa13.65□□□□□ -0.23
RAPGEF3-219ENST00000549151 BMS1Q14692 1282 aaKnown RBP13.65□□□□□ -0.23
RAPGEF3-219ENST00000549151 TMCO3Q6UWJ1 677 aa13.65□□□□□ -0.23
RAPGEF3-219ENST00000549151 WASF1Q92558 559 aa13.65□□□□□ -0.23
RAPGEF3-219ENST00000549151 CSRNP2Q9H175 543 aa13.65□□□□□ -0.23
RAPGEF3-219ENST00000549151 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.65□□□□□ -0.23
RAPGEF3-219ENST00000549151 ADAMTSL3P82987 1691 aa13.64□□□□□ -0.23
RAPGEF3-219ENST00000549151 VWA3AA6NCI4 1184 aa13.64□□□□□ -0.23
RAPGEF3-219ENST00000549151 CASQ1P31415 396 aa13.64□□□□□ -0.23
RAPGEF3-219ENST00000549151 LIFRP42702 1097 aa13.64□□□□□ -0.23
RAPGEF3-219ENST00000549151 KRT23Q9C075 422 aa13.64□□□□□ -0.23
RAPGEF3-219ENST00000549151 LZTFL1Q9NQ48 299 aa13.64□□□□□ -0.23
RAPGEF3-219ENST00000549151 FBXO2Q9UK22 296 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF3-219ENST00000549151 ARHGAP6O43182 974 aa13.64□□□□□ -0.23
RAPGEF3-219ENST00000549151 EPSTI1Q96J88 318 aa13.64□□□□□ -0.23
RAPGEF3-219ENST00000549151 CYP2D7A0A087X1C5 515 aa13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 H2AFXP16104 143 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 ARID4AP29374 1257 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 SPECC1LQ69YQ0 1117 aa13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 ZNF654Q8IZM8 581 aa13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 CNNM2Q9H8M5 875 aa13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 ARGLU1Q9NWB6 273 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 RAI14Q9P0K7 980 aa13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 AKAP11Q9UKA4 1901 aa13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 COL5A2P05997 1499 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 ABCC12Q96J65 1359 aa13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 PTPREP23469 700 aa13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 RILPL1Q5EBL4 403 aa13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 BTG4Q9NY30 223 aa13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 PARP3Q9Y6F1 533 aa13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 CDHR2Q9BYE9 1310 aa13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 MYH7P12883 1935 aa13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 TEX33O43247 280 aa13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 CYP19A1P11511 503 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 CYP7A1P22680 504 aa13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 PDE4CQ08493 712 aa13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 DHX8Q14562 1220 aaKnown RBP13.63□□□□□ -0.23
RAPGEF3-219ENST00000549151 SLC4A8Q2Y0W8 1093 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms