RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 ZSCAN25Q6NSZ9 544 aa13.23□□□□□ -0.29
GCN1-202ENST00000547263 FOXP4Q8IVH2 680 aaPredicted RBP13.23□□□□□ -0.29
GCN1-202ENST00000547263 MAPKAPK5Q8IW41 473 aa13.23□□□□□ -0.29
GCN1-202ENST00000547263 SCYL3Q8IZE3 742 aa13.23□□□□□ -0.29
GCN1-202ENST00000547263 LCORLQ8N3X6 602 aa13.23□□□□□ -0.29
GCN1-202ENST00000547263 CNKSR2Q8WXI2 1034 aa13.23□□□□□ -0.29
GCN1-202ENST00000547263 ELP3Q9H9T3 547 aa13.23□□□□□ -0.29
GCN1-202ENST00000547263 BAZ2AQ9UIF9 1905 aaKnown RBP13.23□□□□□ -0.29
GCN1-202ENST00000547263 LOC285556D6RIA3 1793 aa13.22□□□□□ -0.29
GCN1-202ENST00000547263 ZFYP08048 801 aaPredicted RBP13.22□□□□□ -0.29
GCN1-202ENST00000547263 MOGSQ13724 837 aa13.22□□□□□ -0.29
GCN1-202ENST00000547263 RRP1BQ14684 758 aaKnown RBP13.22□□□□□ -0.29
GCN1-202ENST00000547263 PLEKHM2Q8IWE5 1019 aa13.22□□□□□ -0.29
GCN1-202ENST00000547263 APPBP2Q92624 585 aa13.22□□□□□ -0.29
GCN1-202ENST00000547263 PTPN18Q99952 460 aa13.22□□□□□ -0.29
GCN1-202ENST00000547263 PUS7LQ9H0K6 701 aaKnown RBP13.22□□□□□ -0.29
GCN1-202ENST00000547263 DCP1AQ9NPI6 582 aaPredicted RBP13.22□□□□□ -0.29
GCN1-202ENST00000547263 IGF2BP3O00425 579 aaKnown RBP eCLIP13.21□□□□□ -0.29
GCN1-202ENST00000547263 IRF6O14896 467 aa13.21□□□□□ -0.29
GCN1-202ENST00000547263 CAP2P40123 477 aa13.21□□□□□ -0.29
GCN1-202ENST00000547263 TATDN1Q6P1N9 297 aa13.21□□□□□ -0.29
GCN1-202ENST00000547263 IFNL1Q8IU54 200 aa13.21□□□□□ -0.29
GCN1-202ENST00000547263 ZSCAN29Q8IWY8 852 aaPredicted RBP13.21□□□□□ -0.29
GCN1-202ENST00000547263 OSBP2Q969R2 916 aa13.21□□□□□ -0.29
GCN1-202ENST00000547263 AIDAQ96BJ3 306 aa13.21□□□□□ -0.29
GCN1-202ENST00000547263 CRNKL1Q9BZJ0 848 aaKnown RBP13.21□□□□□ -0.29
GCN1-202ENST00000547263 LNPKQ9C0E8 428 aa13.21□□□□□ -0.29
GCN1-202ENST00000547263 ZCCHC17Q9NP64 241 aaKnown RBP13.21□□□□□ -0.29
GCN1-202ENST00000547263 GINM1Q9NU53 330 aa13.21□□□□□ -0.29
GCN1-202ENST00000547263 PALD1Q9ULE6 856 aa13.21□□□□□ -0.29
GCN1-202ENST00000547263 RNF113AO15541 343 aaKnown RBP13.2□□□□□ -0.3
GCN1-202ENST00000547263 MBD4O95243 580 aa13.2□□□□□ -0.3
GCN1-202ENST00000547263 ALDH1A1P00352 501 aa13.2□□□□□ -0.3
GCN1-202ENST00000547263 PTPRAP18433 802 aa13.2□□□□□ -0.3
GCN1-202ENST00000547263 GTF2A2P52657 109 aa13.2□□□□□ -0.3
GCN1-202ENST00000547263 LBX1P52954 281 aa13.2□□□□□ -0.3
GCN1-202ENST00000547263 IRX6P78412 446 aaPredicted RBP13.2□□□□□ -0.3
GCN1-202ENST00000547263 ZMYM1Q5SVZ6 1142 aa13.2□□□□□ -0.3
GCN1-202ENST00000547263 BRI3BPQ8WY22 251 aa13.2□□□□□ -0.3
GCN1-202ENST00000547263 OTUD5Q96G74 571 aa13.2□□□□□ -0.3
GCN1-202ENST00000547263 STRBPQ96SI9 672 aaKnown RBP13.2□□□□□ -0.3
GCN1-202ENST00000547263 ARMT1Q9H993 441 aa13.2□□□□□ -0.3
GCN1-202ENST00000547263 ATP8A2Q9NTI2 1148 aa13.2□□□□□ -0.3
GCN1-202ENST00000547263 AFG3L2Q9Y4W6 797 aa13.2□□□□□ -0.3
GCN1-202ENST00000547263 GREB1LQ9C091 1923 aaPredicted RBP13.19□□□□□ -0.3
GCN1-202ENST00000547263 FAM196BA6NMK8 535 aa13.19□□□□□ -0.3
GCN1-202ENST00000547263 CXCL11O14625 94 aa13.19□□□□□ -0.3
GCN1-202ENST00000547263 PDE4AP27815 886 aa13.19□□□□□ -0.3
GCN1-202ENST00000547263 USP5P45974 858 aa13.19□□□□□ -0.3
GCN1-202ENST00000547263 PLCD1P51178 756 aa13.19□□□□□ -0.3
GCN1-202ENST00000547263 GIMAP6Q6P9H5 292 aa13.19□□□□□ -0.3
GCN1-202ENST00000547263 SDR42E1Q8WUS8 393 aa13.19□□□□□ -0.3
GCN1-202ENST00000547263 EVI5LQ96CN4 794 aa13.19□□□□□ -0.3
GCN1-202ENST00000547263 BEGAINQ9BUH8 593 aa13.19□□□□□ -0.3
GCN1-202ENST00000547263 TBC1D2Q9BYX2 928 aa13.19□□□□□ -0.3
GCN1-202ENST00000547263 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.19□□□□□ -0.3
GCN1-202ENST00000547263 CASP8AP2Q9UKL3 1982 aa13.19□□□□□ -0.3
GCN1-202ENST00000547263 PRKAB2O43741 272 aa13.18□□□□□ -0.3
GCN1-202ENST00000547263 HLA-DOAP06340 250 aa13.18□□□□□ -0.3
GCN1-202ENST00000547263 JAG1P78504 1218 aa13.18□□□□□ -0.3
GCN1-202ENST00000547263 MKRN3Q13064 507 aaKnown RBP13.18□□□□□ -0.3
GCN1-202ENST00000547263 SNAPC2Q13487 334 aa13.18□□□□□ -0.3
GCN1-202ENST00000547263 COL13A1Q5TAT6 717 aaPredicted RBP13.18□□□□□ -0.3
GCN1-202ENST00000547263 TTC6Q86TZ1 520 aa13.18□□□□□ -0.3
GCN1-202ENST00000547263 BCL11AQ9H165 835 aa13.18□□□□□ -0.3
GCN1-202ENST00000547263 SERPINB13Q9UIV8 391 aa13.18□□□□□ -0.3
GCN1-202ENST00000547263 MYH8P13535 1937 aa13.17□□□□□ -0.3
GCN1-202ENST00000547263 A0A0G2JLL6 359 aaPredicted RBP13.17□□□□□ -0.3
GCN1-202ENST00000547263 GSG1L2A8MUP6 293 aa13.17□□□□□ -0.3
GCN1-202ENST00000547263 FOXP2O15409 715 aa13.17□□□□□ -0.3
GCN1-202ENST00000547263 TRPA1O75762 1119 aa13.17□□□□□ -0.3
GCN1-202ENST00000547263 CETPP11597 493 aa13.17□□□□□ -0.3
GCN1-202ENST00000547263 SHMT1P34896 483 aa13.17□□□□□ -0.3
GCN1-202ENST00000547263 LRRFIP1Q32MZ4 808 aaKnown RBP13.17□□□□□ -0.3
GCN1-202ENST00000547263 SBK1Q52WX2 424 aa13.17□□□□□ -0.3
GCN1-202ENST00000547263 SH3D19Q5HYK7 790 aa13.17□□□□□ -0.3
GCN1-202ENST00000547263 C12orf60Q5U649 245 aa13.17□□□□□ -0.3
GCN1-202ENST00000547263 B4GALNT3Q6L9W6 998 aa13.17□□□□□ -0.3
GCN1-202ENST00000547263 PRRT2Q7Z6L0 340 aaPredicted RBP13.17□□□□□ -0.3
GCN1-202ENST00000547263 WDR18Q9BV38 432 aa13.17□□□□□ -0.3
GCN1-202ENST00000547263 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
GCN1-202ENST00000547263 SAP30BPQ9UHR5 308 aaKnown RBP13.17□□□□□ -0.3
GCN1-202ENST00000547263 ROBO3Q96MS0 1386 aa13.17□□□□□ -0.3
GCN1-202ENST00000547263 ADGRA2Q96PE1 1338 aa13.16□□□□□ -0.3
GCN1-202ENST00000547263 CCL15-CCL14A0A0B4J2E2 113 aa13.16□□□□□ -0.3
GCN1-202ENST00000547263 M0R2C6 588 aa13.16□□□□□ -0.3
GCN1-202ENST00000547263 GPAA1O43292 621 aa13.16□□□□□ -0.3
GCN1-202ENST00000547263 ASNSP08243 561 aa13.16□□□□□ -0.3
GCN1-202ENST00000547263 EVX2Q03828 476 aa13.16□□□□□ -0.3
GCN1-202ENST00000547263 CCL15Q16663 113 aa13.16□□□□□ -0.3
GCN1-202ENST00000547263 GPAT2Q6NUI2 795 aa13.16□□□□□ -0.3
GCN1-202ENST00000547263 ANKRD23Q86SG2 305 aa13.16□□□□□ -0.3
GCN1-202ENST00000547263 FAM43AQ8N2R8 423 aa13.16□□□□□ -0.3
GCN1-202ENST00000547263 R3HDMLQ9H3Y0 253 aa13.16□□□□□ -0.3
GCN1-202ENST00000547263 EPB41L4AQ9HCS5 686 aaPredicted RBP13.16□□□□□ -0.3
GCN1-202ENST00000547263 TSKSQ9UJT2 592 aa13.16□□□□□ -0.3
GCN1-202ENST00000547263 BTBD19C9JJ37 291 aa13.15□□□□□ -0.3
GCN1-202ENST00000547263 GPR25O00155 361 aa13.15□□□□□ -0.3
GCN1-202ENST00000547263 GNAT2P19087 354 aa13.15□□□□□ -0.3
GCN1-202ENST00000547263 SHROOM1Q2M3G4 852 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms