RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 KCNH4Q9UQ05 1017 aa14.59□□□□□ -0.07
HDAC7-226ENST00000547259 SALL1Q9NSC2 1324 aa14.59□□□□□ -0.07
HDAC7-226ENST00000547259 CXCL11O14625 94 aa14.58□□□□□ -0.08
HDAC7-226ENST00000547259 GSPT1P15170 499 aaKnown RBP14.58□□□□□ -0.08
HDAC7-226ENST00000547259 TTF1Q15361 905 aaPredicted RBP14.58□□□□□ -0.08
HDAC7-226ENST00000547259 NOL9Q5SY16 702 aaKnown RBP14.58□□□□□ -0.08
HDAC7-226ENST00000547259 C17orf99Q6UX52 265 aa14.58□□□□□ -0.08
HDAC7-226ENST00000547259 MIGA2Q7L4E1 593 aa14.58□□□□□ -0.08
HDAC7-226ENST00000547259 PDHXO00330 501 aa14.57□□□□□ -0.08
HDAC7-226ENST00000547259 CYP2E1P05181 493 aaPredicted RBP14.57□□□□□ -0.08
HDAC7-226ENST00000547259 CDC42EP5Q6NZY7 148 aa14.57□□□□□ -0.08
HDAC7-226ENST00000547259 FASTKD5Q7L8L6 764 aaKnown RBP14.57□□□□□ -0.08
HDAC7-226ENST00000547259 RAET1EQ8TD07 263 aa14.57□□□□□ -0.08
HDAC7-226ENST00000547259 RILPL2Q969X0 211 aa14.57□□□□□ -0.08
HDAC7-226ENST00000547259 EDC3Q96F86 508 aaKnown RBP14.57□□□□□ -0.08
HDAC7-226ENST00000547259 PARK7Q99497 189 aaKnown RBP14.57□□□□□ -0.08
HDAC7-226ENST00000547259 USP40Q9NVE5 1235 aa14.57□□□□□ -0.08
HDAC7-226ENST00000547259 ABCF2Q9UG63 623 aa14.57□□□□□ -0.08
HDAC7-226ENST00000547259 SRRDQ9UH36 339 aa14.57□□□□□ -0.08
HDAC7-226ENST00000547259 DAGLAQ9Y4D2 1042 aa14.57□□□□□ -0.08
HDAC7-226ENST00000547259 MYH2Q9UKX2 1941 aa14.56□□□□□ -0.08
HDAC7-226ENST00000547259 TRIOBPQ9H2D6 2365 aa14.56□□□□□ -0.08
HDAC7-226ENST00000547259 ENTPD3O75355 529 aa14.56□□□□□ -0.08
HDAC7-226ENST00000547259 FMNL1O95466 1100 aaPredicted RBP14.56□□□□□ -0.08
HDAC7-226ENST00000547259 INPP5BP32019 993 aa14.56□□□□□ -0.08
HDAC7-226ENST00000547259 PSMC4P43686 418 aa14.56□□□□□ -0.08
HDAC7-226ENST00000547259 CAP1Q01518 475 aa14.56□□□□□ -0.08
HDAC7-226ENST00000547259 TCP10Q12799 353 aa14.56□□□□□ -0.08
HDAC7-226ENST00000547259 BMP2KLQ5H9B9 411 aa14.56□□□□□ -0.08
HDAC7-226ENST00000547259 SPTY2D1Q68D10 685 aaPredicted RBP14.56□□□□□ -0.08
HDAC7-226ENST00000547259 TBC1D9Q6ZT07 1266 aa14.56□□□□□ -0.08
HDAC7-226ENST00000547259 EVI5LQ96CN4 794 aa14.56□□□□□ -0.08
HDAC7-226ENST00000547259 TRIM47Q96LD4 638 aa14.56□□□□□ -0.08
HDAC7-226ENST00000547259 FSD1Q9BTV5 496 aa14.56□□□□□ -0.08
HDAC7-226ENST00000547259 ANTXR1Q9H6X2 564 aa14.56□□□□□ -0.08
HDAC7-226ENST00000547259 PIH1D3Q9NQM4 214 aaKnown RBP14.56□□□□□ -0.08
HDAC7-226ENST00000547259 PICK1Q9NRD5 415 aa14.56□□□□□ -0.08
HDAC7-226ENST00000547259 UBXN2AP68543 259 aa14.55□□□□□ -0.08
HDAC7-226ENST00000547259 SH3TC2Q8TF17 1288 aa14.55□□□□□ -0.08
HDAC7-226ENST00000547259 IDI2Q9BXS1 227 aa14.55□□□□□ -0.08
HDAC7-226ENST00000547259 RAI14Q9P0K7 980 aa14.55□□□□□ -0.08
HDAC7-226ENST00000547259 LRP2BPQ9P2M1 347 aa14.55□□□□□ -0.08
HDAC7-226ENST00000547259 IDH1O75874 414 aaKnown RBP14.54□□□□□ -0.08
HDAC7-226ENST00000547259 SDSP20132 328 aa14.54□□□□□ -0.08
HDAC7-226ENST00000547259 PRDX5P30044 214 aa14.54□□□□□ -0.08
HDAC7-226ENST00000547259 GRK4P32298 578 aa14.54□□□□□ -0.08
HDAC7-226ENST00000547259 FCGRTP55899 365 aa14.54□□□□□ -0.08
HDAC7-226ENST00000547259 DIXDC1Q155Q3 683 aa14.54□□□□□ -0.08
HDAC7-226ENST00000547259 ERICH6Q7L0X2 663 aa14.54□□□□□ -0.08
HDAC7-226ENST00000547259 KBTBD3Q8NAB2 608 aa14.54□□□□□ -0.08
HDAC7-226ENST00000547259 HTATIP2Q9BUP3 242 aa14.54□□□□□ -0.08
HDAC7-226ENST00000547259 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.54□□□□□ -0.085e-7■■■□□ 16.6
HDAC7-226ENST00000547259 CPA4Q9UI42 421 aa14.54□□□□□ -0.08
HDAC7-226ENST00000547259 SLC45A1Q9Y2W3 748 aa14.54□□□□□ -0.08
HDAC7-226ENST00000547259 MGAMO43451 1857 aa14.53□□□□□ -0.08
HDAC7-226ENST00000547259 RFX7Q2KHR2 1363 aa14.53□□□□□ -0.08
HDAC7-226ENST00000547259 MAP3K12Q12852 859 aa14.53□□□□□ -0.08
HDAC7-226ENST00000547259 NFIAQ12857 509 aa14.53□□□□□ -0.08
HDAC7-226ENST00000547259 DZIP1Q86YF9 867 aaKnown RBP14.53□□□□□ -0.08
HDAC7-226ENST00000547259 ZSCAN29Q8IWY8 852 aaPredicted RBP14.53□□□□□ -0.08
HDAC7-226ENST00000547259 FAM163AQ96GL9 167 aaPredicted RBP14.53□□□□□ -0.08
HDAC7-226ENST00000547259 ARHGAP39Q9C0H5 1083 aa14.53□□□□□ -0.08
HDAC7-226ENST00000547259 BIN2Q9UBW5 565 aaPredicted RBP14.53□□□□□ -0.08
HDAC7-226ENST00000547259 FAM198AQ9UFP1 575 aa14.53□□□□□ -0.08
HDAC7-226ENST00000547259 MYPNQ86TC9 1320 aa14.52□□□□□ -0.08
HDAC7-226ENST00000547259 CTNND1O60716 968 aaKnown RBP14.52□□□□□ -0.09
HDAC7-226ENST00000547259 GJB1P08034 283 aa14.52□□□□□ -0.09
HDAC7-226ENST00000547259 OSBPP22059 807 aa14.52□□□□□ -0.09
HDAC7-226ENST00000547259 LRRFIP1Q32MZ4 808 aaKnown RBP14.52□□□□□ -0.09
HDAC7-226ENST00000547259 ZSCAN25Q6NSZ9 544 aa14.52□□□□□ -0.09
HDAC7-226ENST00000547259 SCYL3Q8IZE3 742 aa14.52□□□□□ -0.09
HDAC7-226ENST00000547259 SLAIN1Q8ND83 568 aa14.52□□□□□ -0.09
HDAC7-226ENST00000547259 ZHX2Q9Y6X8 837 aa14.52□□□□□ -0.09
HDAC7-226ENST00000547259 GAKO14976 1311 aa14.51□□□□□ -0.09
HDAC7-226ENST00000547259 ADGRA2Q96PE1 1338 aa14.51□□□□□ -0.09
HDAC7-226ENST00000547259 A0A0G2JLL6 359 aaPredicted RBP14.51□□□□□ -0.09
HDAC7-226ENST00000547259 NPM3O75607 178 aaKnown RBP14.51□□□□□ -0.09
HDAC7-226ENST00000547259 MYCP01106 439 aaPredicted RBP14.51□□□□□ -0.09
HDAC7-226ENST00000547259 GJA8P48165 433 aa14.51□□□□□ -0.09
HDAC7-226ENST00000547259 MAP3K10Q02779 954 aa14.51□□□□□ -0.09
HDAC7-226ENST00000547259 PRRT2Q7Z6L0 340 aaPredicted RBP14.51□□□□□ -0.09
HDAC7-226ENST00000547259 MAGEB6Q8N7X4 407 aa14.51□□□□□ -0.09
HDAC7-226ENST00000547259 DPF3Q92784 378 aa14.51□□□□□ -0.09
HDAC7-226ENST00000547259 TBC1D2Q9BYX2 928 aa14.51□□□□□ -0.09
HDAC7-226ENST00000547259 IGSF3O75054 1194 aa14.5□□□□□ -0.09
HDAC7-226ENST00000547259 LDHCP07864 332 aa14.5□□□□□ -0.09
HDAC7-226ENST00000547259 BCRP11274 1271 aa14.5□□□□□ -0.09
HDAC7-226ENST00000547259 PDE6AP16499 860 aa14.5□□□□□ -0.09
HDAC7-226ENST00000547259 GSTO1P78417 241 aa14.5□□□□□ -0.09
HDAC7-226ENST00000547259 MECOMQ03112 1051 aa14.5□□□□□ -0.09
HDAC7-226ENST00000547259 SLC9C2Q5TAH2 1124 aa14.5□□□□□ -0.09
HDAC7-226ENST00000547259 NAA16Q6N069 864 aaPredicted RBP14.5□□□□□ -0.09
HDAC7-226ENST00000547259 NSUN4Q96CB9 384 aaKnown RBP14.5□□□□□ -0.09
HDAC7-226ENST00000547259 RNF208Q9H0X6 261 aa14.5□□□□□ -0.09
HDAC7-226ENST00000547259 DIAPH3Q9NSV4 1193 aa14.5□□□□□ -0.09
HDAC7-226ENST00000547259 PNMA3Q9UL41 463 aa14.5□□□□□ -0.09
HDAC7-226ENST00000547259 COLQQ9Y215 455 aaPredicted RBP14.5□□□□□ -0.09
HDAC7-226ENST00000547259 NR2E3Q9Y5X4 410 aa14.5□□□□□ -0.09
HDAC7-226ENST00000547259 ZNF532Q9HCE3 1301 aa14.49□□□□□ -0.09
HDAC7-226ENST00000547259 CDK5RAP2Q96SN8 1893 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms