RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 CRACR2BQ8N4Y2 399 aaPredicted RBP27.66■■■□□ 2.02
SMARCD1-203ENST00000547247 EHD4Q9H223 541 aa27.66■■■□□ 2.02
SMARCD1-203ENST00000547247 HERC5Q9UII4 1024 aaKnown RBP27.66■■■□□ 2.02
SMARCD1-203ENST00000547247 FZD1Q9UP38 647 aa27.66■■■□□ 2.02
SMARCD1-203ENST00000547247 USP2O75604 605 aaPredicted RBP27.65■■■□□ 2.02
SMARCD1-203ENST00000547247 CYP2D6P10635 497 aa27.65■■■□□ 2.02
SMARCD1-203ENST00000547247 TRIM34Q9BYJ4 488 aa27.65■■■□□ 2.02
SMARCD1-203ENST00000547247 ZNF341Q9BYN7 854 aa27.65■■■□□ 2.02
SMARCD1-203ENST00000547247 SERPINB13Q9UIV8 391 aa27.65■■■□□ 2.02
SMARCD1-203ENST00000547247 ANGEL1Q9UNK9 670 aaKnown RBP27.65■■■□□ 2.02
SMARCD1-203ENST00000547247 CYP2D7A0A087X1C5 515 aa27.65■■■□□ 2.02
SMARCD1-203ENST00000547247 FGAP02671 866 aa27.65■■■□□ 2.02
SMARCD1-203ENST00000547247 KIAA1211Q6ZU35 1233 aa27.65■■■□□ 2.02
SMARCD1-203ENST00000547247 METTL16Q86W50 562 aaKnown RBP27.65■■■□□ 2.02
SMARCD1-203ENST00000547247 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.65■■■□□ 2.02
SMARCD1-203ENST00000547247 PAPPA2Q9BXP8 1791 aa27.64■■■□□ 2.01
SMARCD1-203ENST00000547247 ZMYM6O95789 1325 aa27.64■■■□□ 2.01
SMARCD1-203ENST00000547247 MINDY4BA8MYZ0 360 aa27.64■■■□□ 2.01
SMARCD1-203ENST00000547247 IREB2P48200 963 aaKnown RBP27.64■■■□□ 2.01
SMARCD1-203ENST00000547247 MAP3K11Q16584 847 aa27.64■■■□□ 2.01
SMARCD1-203ENST00000547247 MOB2Q70IA6 237 aa27.64■■■□□ 2.01
SMARCD1-203ENST00000547247 SLURP2P0DP57 97 aa27.63■■■□□ 2.01
SMARCD1-203ENST00000547247 KLRG1Q96E93 195 aa27.63■■■□□ 2.01
SMARCD1-203ENST00000547247 SIPA1L1O43166 1804 aa27.62■■■□□ 2.01
SMARCD1-203ENST00000547247 FAM196BA6NMK8 535 aa27.62■■■□□ 2.01
SMARCD1-203ENST00000547247 EVX2Q03828 476 aa27.62■■■□□ 2.01
SMARCD1-203ENST00000547247 ABT1Q9ULW3 272 aaKnown RBP27.62■■■□□ 2.01
SMARCD1-203ENST00000547247 UBE2Q2LH0YL09 131 aa27.61■■■□□ 2.01
SMARCD1-203ENST00000547247 TAOK2Q9UL54 1235 aa27.61■■■□□ 2.01
SMARCD1-203ENST00000547247 PTH1RQ03431 593 aa27.6■■■□□ 2.01
SMARCD1-203ENST00000547247 GABPAQ06546 454 aa27.6■■■□□ 2.01
SMARCD1-203ENST00000547247 WRNIP1Q96S55 665 aa27.6■■■□□ 2.01
SMARCD1-203ENST00000547247 DNAJC18Q9H819 358 aa27.6■■■□□ 2.01
SMARCD1-203ENST00000547247 ZNF112Q9UJU3 913 aa27.6■■■□□ 2.01
SMARCD1-203ENST00000547247 TLL2Q9Y6L7 1015 aa27.6■■■□□ 2.01
SMARCD1-203ENST00000547247 SMIM22K7EJ46 135 aa27.6■■■□□ 2.01
SMARCD1-203ENST00000547247 HUNKP57058 714 aa27.6■■■□□ 2.01
SMARCD1-203ENST00000547247 PPARAQ07869 468 aa27.6■■■□□ 2.01
SMARCD1-203ENST00000547247 SAPCD2Q86UD0 394 aa27.6■■■□□ 2.01
SMARCD1-203ENST00000547247 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.6■■■□□ 2.01
SMARCD1-203ENST00000547247 ANO2Q9NQ90 1003 aa27.6■■■□□ 2.01
SMARCD1-203ENST00000547247 CTNNA3Q9UI47 895 aa27.6■■■□□ 2.01
SMARCD1-203ENST00000547247 MAP3K9P80192 1104 aa27.59■■■□□ 2.01
SMARCD1-203ENST00000547247 LDLRAD1Q5T700 205 aa27.59■■■□□ 2.01
SMARCD1-203ENST00000547247 DYNLL2Q96FJ2 89 aa27.59■■■□□ 2.01
SMARCD1-203ENST00000547247 SWAP70Q9UH65 585 aa27.59■■■□□ 2.01
SMARCD1-203ENST00000547247 PHF20L1A8MW92 1017 aa27.58■■■□□ 2.01
SMARCD1-203ENST00000547247 C16orf86Q6ZW13 317 aa27.58■■■□□ 2.01
SMARCD1-203ENST00000547247 ANKRD13AQ8IZ07 590 aa27.58■■■□□ 2.01
SMARCD1-203ENST00000547247 DNAJC5GQ8N7S2 189 aa27.58■■■□□ 2.01
SMARCD1-203ENST00000547247 MAP4K1Q92918 833 aa27.58■■■□□ 2.01
SMARCD1-203ENST00000547247 LSG1Q9H089 658 aaKnown RBP27.58■■■□□ 2.01
SMARCD1-203ENST00000547247 UNCXA6NJT0 531 aa27.57■■■□□ 2
SMARCD1-203ENST00000547247 SLC3A2P08195 630 aaKnown RBP27.57■■■□□ 2
SMARCD1-203ENST00000547247 ANAPC4Q9UJX5 808 aa27.57■■■□□ 2
SMARCD1-203ENST00000547247 U3KPZ7 1027 aaPredicted RBP27.57■■■□□ 2
SMARCD1-203ENST00000547247 ROBO3Q96MS0 1386 aa27.57■■■□□ 2
SMARCD1-203ENST00000547247 LAMB1P07942 1786 aa27.57■■■□□ 2
SMARCD1-203ENST00000547247 INPP5BP32019 993 aa27.56■■■□□ 2
SMARCD1-203ENST00000547247 TATDN1Q6P1N9 297 aa27.56■■■□□ 2
SMARCD1-203ENST00000547247 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.56■■■□□ 2
SMARCD1-203ENST00000547247 ZNF213O14771 459 aa27.56■■■□□ 2
SMARCD1-203ENST00000547247 SHMT1P34896 483 aa27.56■■■□□ 2
SMARCD1-203ENST00000547247 CDK8P49336 464 aa27.56■■■□□ 2
SMARCD1-203ENST00000547247 STK11IPQ8N1F8 1099 aa27.56■■■□□ 2
SMARCD1-203ENST00000547247 SLC44A5Q8NCS7 719 aa27.56■■■□□ 2
SMARCD1-203ENST00000547247 CSADQ9Y600 493 aa27.56■■■□□ 2
SMARCD1-203ENST00000547247 RASSF10A6NK89 507 aa27.55■■■□□ 2
SMARCD1-203ENST00000547247 CTNND1O60716 968 aaKnown RBP27.55■■■□□ 2
SMARCD1-203ENST00000547247 HAND2P61296 217 aa27.55■■■□□ 2
SMARCD1-203ENST00000547247 IMMTQ16891 758 aaKnown RBP27.55■■■□□ 2
SMARCD1-203ENST00000547247 ZKSCAN4Q969J2 545 aaPredicted RBP27.55■■■□□ 2
SMARCD1-203ENST00000547247 ZNF287Q9HBT7 754 aa27.55■■■□□ 2
SMARCD1-203ENST00000547247 REC8O95072 547 aa27.54■■■□□ 2
SMARCD1-203ENST00000547247 CTDSPL2Q05D32 466 aa27.54■■■□□ 2
SMARCD1-203ENST00000547247 VGLL4Q14135 290 aa27.54■■■□□ 2
SMARCD1-203ENST00000547247 RBM8AQ9Y5S9 174 aaKnown RBP27.54■■■□□ 2
SMARCD1-203ENST00000547247 CAP2P40123 477 aa27.53■■■□□ 2
SMARCD1-203ENST00000547247 PDE4BQ07343 736 aa27.53■■■□□ 2
SMARCD1-203ENST00000547247 DEFB115Q30KQ5 88 aa27.53■■■□□ 2
SMARCD1-203ENST00000547247 CERKLQ49MI3 558 aaPredicted RBP27.53■■■□□ 2
SMARCD1-203ENST00000547247 HHIPL1Q96JK4 782 aa27.53■■■□□ 2
SMARCD1-203ENST00000547247 CLMNQ96JQ2 1002 aa27.53■■■□□ 2
SMARCD1-203ENST00000547247 MKNK2Q9HBH9 465 aa27.53■■■□□ 2
SMARCD1-203ENST00000547247 RRP1BQ14684 758 aaKnown RBP27.52■■■□□ 2
SMARCD1-203ENST00000547247 NOL9Q5SY16 702 aaKnown RBP27.52■■■□□ 2
SMARCD1-203ENST00000547247 SLC10A4Q96EP9 437 aa27.52■■■□□ 2
SMARCD1-203ENST00000547247 SCYL3Q8IZE3 742 aa27.52■■■□□ 2
SMARCD1-203ENST00000547247 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.52■■■□□ 2
SMARCD1-203ENST00000547247 OTOFQ9HC10 1997 aa27.52■■■□□ 2
SMARCD1-203ENST00000547247 RGMBQ6NW40 437 aa27.51■■□□□ 1.99
SMARCD1-203ENST00000547247 PAXIP1Q6ZW49 1069 aaPredicted RBP27.51■■□□□ 1.99
SMARCD1-203ENST00000547247 EIF5BO60841 1220 aaKnown RBP27.5■■□□□ 1.99
SMARCD1-203ENST00000547247 ZNF157P51786 506 aaPredicted RBP27.5■■□□□ 1.99
SMARCD1-203ENST00000547247 CCDC17Q96LX7 622 aa27.5■■□□□ 1.99
SMARCD1-203ENST00000547247 ELP3Q9H9T3 547 aa27.5■■□□□ 1.99
SMARCD1-203ENST00000547247 PICK1Q9NRD5 415 aa27.5■■□□□ 1.99
SMARCD1-203ENST00000547247 SNCAIPQ9Y6H5 919 aa27.5■■□□□ 1.99
SMARCD1-203ENST00000547247 GDF11O95390 407 aa27.49■■□□□ 1.99
SMARCD1-203ENST00000547247 ASNSP08243 561 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms