RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 FLT1P17948 1338 aa13.02□□□□□ -0.33
LINC00661-202ENST00000547102 CDK5RAP2Q96SN8 1893 aa13.02□□□□□ -0.33
LINC00661-202ENST00000547102 FAM196BA6NMK8 535 aa13.01□□□□□ -0.33
LINC00661-202ENST00000547102 HLA-DOAP06340 250 aa13.01□□□□□ -0.33
LINC00661-202ENST00000547102 RGS19P49795 217 aa13.01□□□□□ -0.33
LINC00661-202ENST00000547102 CRACR2BQ8N4Y2 399 aaPredicted RBP13.01□□□□□ -0.33
LINC00661-202ENST00000547102 MIGA1Q8NAN2 632 aa13.01□□□□□ -0.33
LINC00661-202ENST00000547102 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.01□□□□□ -0.33
LINC00661-202ENST00000547102 DNAJC2Q99543 621 aaKnown RBP13.01□□□□□ -0.33
LINC00661-202ENST00000547102 ATAD5Q96QE3 1844 aa13.01□□□□□ -0.33
LINC00661-202ENST00000547102 A0A0G2JLL6 359 aaPredicted RBP13□□□□□ -0.33
LINC00661-202ENST00000547102 TRIM75PA6NK02 468 aa13□□□□□ -0.33
LINC00661-202ENST00000547102 USP5P45974 858 aa13□□□□□ -0.33
LINC00661-202ENST00000547102 GADL1Q6ZQY3 521 aa13□□□□□ -0.33
LINC00661-202ENST00000547102 PRRT2Q7Z6L0 340 aaPredicted RBP13□□□□□ -0.33
LINC00661-202ENST00000547102 TBC1D2Q9BYX2 928 aa13□□□□□ -0.33
LINC00661-202ENST00000547102 ANTXR1Q9H6X2 564 aa13□□□□□ -0.33
LINC00661-202ENST00000547102 PTPN22Q9Y2R2 807 aa13□□□□□ -0.33
LINC00661-202ENST00000547102 AFG3L2Q9Y4W6 797 aa13□□□□□ -0.33
LINC00661-202ENST00000547102 PTPRFP10586 1907 aa13□□□□□ -0.33
LINC00661-202ENST00000547102 GOLIM4O00461 696 aa12.99□□□□□ -0.33
LINC00661-202ENST00000547102 SLURP2P0DP57 97 aa12.99□□□□□ -0.33
LINC00661-202ENST00000547102 DYNLL1P63167 89 aaKnown RBP12.99□□□□□ -0.33
LINC00661-202ENST00000547102 LACTBP83111 547 aaPredicted RBP12.99□□□□□ -0.33
LINC00661-202ENST00000547102 LRRCC1Q9C099 1032 aa12.99□□□□□ -0.33
LINC00661-202ENST00000547102 AS3MTQ9HBK9 375 aa12.99□□□□□ -0.33
LINC00661-202ENST00000547102 SAP30BPQ9UHR5 308 aaKnown RBP12.99□□□□□ -0.33
LINC00661-202ENST00000547102 CPA4Q9UI42 421 aa12.99□□□□□ -0.33
LINC00661-202ENST00000547102 PHIPQ8WWQ0 1821 aa12.99□□□□□ -0.33
LINC00661-202ENST00000547102 MYH1P12882 1939 aa12.98□□□□□ -0.33
LINC00661-202ENST00000547102 GNRH1P01148 92 aa12.98□□□□□ -0.33
LINC00661-202ENST00000547102 PDE6AP16499 860 aa12.98□□□□□ -0.33
LINC00661-202ENST00000547102 CAP2P40123 477 aa12.98□□□□□ -0.33
LINC00661-202ENST00000547102 MOGSQ13724 837 aa12.98□□□□□ -0.33
LINC00661-202ENST00000547102 SMCR8Q8TEV9 937 aaPredicted RBP12.98□□□□□ -0.33
LINC00661-202ENST00000547102 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.98□□□□□ -0.33
LINC00661-202ENST00000547102 PALD1Q9ULE6 856 aa12.98□□□□□ -0.33
LINC00661-202ENST00000547102 SLC45A1Q9Y2W3 748 aa12.98□□□□□ -0.33
LINC00661-202ENST00000547102 SIPA1L1O43166 1804 aa12.97□□□□□ -0.33
LINC00661-202ENST00000547102 MAGEB6P1A0A0J9YX57 407 aa12.97□□□□□ -0.33
LINC00661-202ENST00000547102 USP17L5A8MUK1 530 aa12.97□□□□□ -0.33
LINC00661-202ENST00000547102 ASNSP08243 561 aa12.97□□□□□ -0.33
LINC00661-202ENST00000547102 SLC9C2Q5TAH2 1124 aa12.97□□□□□ -0.33
LINC00661-202ENST00000547102 GPAT2Q6NUI2 795 aa12.97□□□□□ -0.33
LINC00661-202ENST00000547102 C17orf99Q6UX52 265 aa12.97□□□□□ -0.33
LINC00661-202ENST00000547102 CCDC84Q86UT8 332 aaPredicted RBP12.97□□□□□ -0.33
LINC00661-202ENST00000547102 FOXP4Q8IVH2 680 aaPredicted RBP12.97□□□□□ -0.33
LINC00661-202ENST00000547102 PROCA1Q8NCQ7 364 aaPredicted RBP12.97□□□□□ -0.33
LINC00661-202ENST00000547102 ZNF280CQ8ND82 737 aa12.97□□□□□ -0.33
LINC00661-202ENST00000547102 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.97□□□□□ -0.33
LINC00661-202ENST00000547102 PAG1Q9NWQ8 432 aa12.97□□□□□ -0.33
LINC00661-202ENST00000547102 PNMA3Q9UL41 463 aa12.97□□□□□ -0.33
LINC00661-202ENST00000547102 AGTPBP1Q9UPW5 1226 aa12.97□□□□□ -0.33
LINC00661-202ENST00000547102 ADGRA2Q96PE1 1338 aa12.96□□□□□ -0.33
LINC00661-202ENST00000547102 NAV1Q8NEY1 1877 aa12.96□□□□□ -0.33
LINC00661-202ENST00000547102 CYP2C8P10632 490 aa12.96□□□□□ -0.33
LINC00661-202ENST00000547102 ATP5JP18859 108 aa12.96□□□□□ -0.33
LINC00661-202ENST00000547102 HOXD10P28358 340 aa12.96□□□□□ -0.33
LINC00661-202ENST00000547102 PRMT2P55345 433 aa12.96□□□□□ -0.33
LINC00661-202ENST00000547102 SPP2Q13103 211 aa12.96□□□□□ -0.33
LINC00661-202ENST00000547102 PABPC4Q13310 644 aaKnown RBP eCLIP12.96□□□□□ -0.33
LINC00661-202ENST00000547102 SLC4A8Q2Y0W8 1093 aa12.96□□□□□ -0.33
LINC00661-202ENST00000547102 SLC9C1Q4G0N8 1177 aa12.96□□□□□ -0.33
LINC00661-202ENST00000547102 NBPF11Q86T75 865 aa12.96□□□□□ -0.33
LINC00661-202ENST00000547102 GPATCH3Q96I76 525 aa12.96□□□□□ -0.33
LINC00661-202ENST00000547102 YTHDC1Q96MU7 727 aaKnown RBP12.96□□□□□ -0.33
LINC00661-202ENST00000547102 CRNKL1Q9BZJ0 848 aaKnown RBP12.96□□□□□ -0.33
LINC00661-202ENST00000547102 ARHGAP39Q9C0H5 1083 aa12.96□□□□□ -0.33
LINC00661-202ENST00000547102 BOLA2Q9H3K6 86 aa12.96□□□□□ -0.33
LINC00661-202ENST00000547102 GINM1Q9NU53 330 aa12.96□□□□□ -0.33
LINC00661-202ENST00000547102 PTCH2Q9Y6C5 1203 aa12.96□□□□□ -0.33
LINC00661-202ENST00000547102 LOC285556D6RIA3 1793 aa12.96□□□□□ -0.34
LINC00661-202ENST00000547102 ZSWIM8A7E2V4 1837 aa12.95□□□□□ -0.34
LINC00661-202ENST00000547102 ZNF532Q9HCE3 1301 aa12.95□□□□□ -0.34
LINC00661-202ENST00000547102 ECM2O94769 699 aaPredicted RBP12.95□□□□□ -0.34
LINC00661-202ENST00000547102 FMNL1O95466 1100 aaPredicted RBP12.95□□□□□ -0.34
LINC00661-202ENST00000547102 PSMC4P43686 418 aa12.95□□□□□ -0.34
LINC00661-202ENST00000547102 HMGCS2P54868 508 aa12.95□□□□□ -0.34
LINC00661-202ENST00000547102 FCGRTP55899 365 aa12.95□□□□□ -0.34
LINC00661-202ENST00000547102 RRP1P56182 461 aaKnown RBP12.95□□□□□ -0.34
LINC00661-202ENST00000547102 CAP1Q01518 475 aa12.95□□□□□ -0.34
LINC00661-202ENST00000547102 TTC6Q86TZ1 520 aa12.95□□□□□ -0.34
LINC00661-202ENST00000547102 METTL16Q86W50 562 aaKnown RBP12.95□□□□□ -0.34
LINC00661-202ENST00000547102 ARMC5Q96C12 935 aa12.95□□□□□ -0.34
LINC00661-202ENST00000547102 DNAJC18Q9H819 358 aa12.95□□□□□ -0.34
LINC00661-202ENST00000547102 TMOD4Q9NZQ9 345 aa12.95□□□□□ -0.34
LINC00661-202ENST00000547102 SERPINB13Q9UIV8 391 aa12.95□□□□□ -0.34
LINC00661-202ENST00000547102 SMARCA5O60264 1052 aaPredicted RBP12.94□□□□□ -0.34
LINC00661-202ENST00000547102 GDF11O95390 407 aa12.94□□□□□ -0.34
LINC00661-202ENST00000547102 POLR3DP05423 398 aaPredicted RBP12.94□□□□□ -0.34
LINC00661-202ENST00000547102 RRP1BQ14684 758 aaKnown RBP12.94□□□□□ -0.34
LINC00661-202ENST00000547102 HAUS7Q99871 368 aa12.94□□□□□ -0.34
LINC00661-202ENST00000547102 RIOK1Q9BRS2 568 aaKnown RBP12.94□□□□□ -0.34
LINC00661-202ENST00000547102 EHD4Q9H223 541 aa12.94□□□□□ -0.34
LINC00661-202ENST00000547102 ZBTB21Q9ULJ3 1066 aa12.94□□□□□ -0.34
LINC00661-202ENST00000547102 MYH7P12883 1935 aa12.94□□□□□ -0.34
LINC00661-202ENST00000547102 DDX60LQ5H9U9 1706 aaKnown RBP12.93□□□□□ -0.34
LINC00661-202ENST00000547102 MYPNQ86TC9 1320 aa12.93□□□□□ -0.34
LINC00661-202ENST00000547102 BCRP11274 1271 aa12.93□□□□□ -0.34
LINC00661-202ENST00000547102 OSBPP22059 807 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms