RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 RAD50Q92878 1312 aa16.45■□□□□ 0.22
PTCH1-213ENST00000546820 HSPD1P10809 573 aaKnown RBP16.44■□□□□ 0.22
PTCH1-213ENST00000546820 ALX1Q15699 326 aa16.44■□□□□ 0.22
PTCH1-213ENST00000546820 C12orf60Q5U649 245 aa16.44■□□□□ 0.22
PTCH1-213ENST00000546820 RGMBQ6NW40 437 aa16.44■□□□□ 0.22
PTCH1-213ENST00000546820 CTR9Q6PD62 1173 aa16.44■□□□□ 0.22
PTCH1-213ENST00000546820 MOB2Q70IA6 237 aa16.44■□□□□ 0.22
PTCH1-213ENST00000546820 WRNIP1Q96S55 665 aa16.44■□□□□ 0.22
PTCH1-213ENST00000546820 ZNF112Q9UJU3 913 aa16.44■□□□□ 0.22
PTCH1-213ENST00000546820 CSADQ9Y600 493 aa16.44■□□□□ 0.22
PTCH1-213ENST00000546820 FOCADQ5VW36 1801 aa16.44■□□□□ 0.22
PTCH1-213ENST00000546820 MYH1P12882 1939 aa16.43■□□□□ 0.22
PTCH1-213ENST00000546820 MINDY4BA8MYZ0 360 aa16.43■□□□□ 0.22
PTCH1-213ENST00000546820 CDC45O75419 566 aa16.43■□□□□ 0.22
PTCH1-213ENST00000546820 SLC3A2P08195 630 aaKnown RBP16.43■□□□□ 0.22
PTCH1-213ENST00000546820 PLCD1P51178 756 aa16.43■□□□□ 0.22
PTCH1-213ENST00000546820 SLC4A8Q2Y0W8 1093 aa16.43■□□□□ 0.22
PTCH1-213ENST00000546820 KIAA1211Q6ZU35 1233 aa16.43■□□□□ 0.22
PTCH1-213ENST00000546820 PAXIP1Q6ZW49 1069 aaPredicted RBP16.43■□□□□ 0.22
PTCH1-213ENST00000546820 ZNF589Q86UQ0 364 aaPredicted RBP16.43■□□□□ 0.22
PTCH1-213ENST00000546820 METTL16Q86W50 562 aaKnown RBP16.43■□□□□ 0.22
PTCH1-213ENST00000546820 CCDC102AQ96A19 550 aa16.43■□□□□ 0.22
PTCH1-213ENST00000546820 FZD1Q9UP38 647 aa16.43■□□□□ 0.22
PTCH1-213ENST00000546820 CDK5RAP2Q96SN8 1893 aa16.43■□□□□ 0.22
PTCH1-213ENST00000546820 PAPPA2Q9BXP8 1791 aa16.43■□□□□ 0.22
PTCH1-213ENST00000546820 RASSF10A6NK89 507 aa16.42■□□□□ 0.22
PTCH1-213ENST00000546820 CTNND1O60716 968 aaKnown RBP16.42■□□□□ 0.22
PTCH1-213ENST00000546820 ECE1P42892 770 aa16.42■□□□□ 0.22
PTCH1-213ENST00000546820 ZNF157P51786 506 aaPredicted RBP16.42■□□□□ 0.22
PTCH1-213ENST00000546820 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.42■□□□□ 0.22
PTCH1-213ENST00000546820 DSCC1Q9BVC3 393 aa16.42■□□□□ 0.22
PTCH1-213ENST00000546820 ZNF287Q9HBT7 754 aa16.42■□□□□ 0.22
PTCH1-213ENST00000546820 SWAP70Q9UH65 585 aa16.42■□□□□ 0.22
PTCH1-213ENST00000546820 CTNNA3Q9UI47 895 aa16.42■□□□□ 0.22
PTCH1-213ENST00000546820 SSC5DA1L4H1 1573 aa16.42■□□□□ 0.22
PTCH1-213ENST00000546820 PHF20L1A8MW92 1017 aa16.41■□□□□ 0.22
PTCH1-213ENST00000546820 SGSM2O43147 1006 aa16.41■□□□□ 0.22
PTCH1-213ENST00000546820 FGAP02671 866 aa16.41■□□□□ 0.22
PTCH1-213ENST00000546820 VPS53Q5VIR6 699 aa16.41■□□□□ 0.22
PTCH1-213ENST00000546820 EPB41L4AQ9HCS5 686 aaPredicted RBP16.41■□□□□ 0.22
PTCH1-213ENST00000546820 PICK1Q9NRD5 415 aa16.41■□□□□ 0.22
PTCH1-213ENST00000546820 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.41■□□□□ 0.22
PTCH1-213ENST00000546820 CYP2D6P10635 497 aa16.4■□□□□ 0.22
PTCH1-213ENST00000546820 INPP5BP32019 993 aa16.4■□□□□ 0.22
PTCH1-213ENST00000546820 HTRA3P83110 453 aa16.4■□□□□ 0.22
PTCH1-213ENST00000546820 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.4■□□□□ 0.22
PTCH1-213ENST00000546820 ZKSCAN4Q969J2 545 aaPredicted RBP16.4■□□□□ 0.22
PTCH1-213ENST00000546820 ESYT1Q9BSJ8 1104 aa16.4■□□□□ 0.22
PTCH1-213ENST00000546820 GINM1Q9NU53 330 aa16.4■□□□□ 0.22
PTCH1-213ENST00000546820 FAM196BA6NMK8 535 aa16.39■□□□□ 0.21
PTCH1-213ENST00000546820 CAP2P40123 477 aa16.39■□□□□ 0.21
PTCH1-213ENST00000546820 GABPAQ06546 454 aa16.39■□□□□ 0.21
PTCH1-213ENST00000546820 PDE4BQ07343 736 aa16.39■□□□□ 0.21
PTCH1-213ENST00000546820 CERKLQ49MI3 558 aaPredicted RBP16.39■□□□□ 0.21
PTCH1-213ENST00000546820 NOL9Q5SY16 702 aaKnown RBP16.39■□□□□ 0.21
PTCH1-213ENST00000546820 TATDN1Q6P1N9 297 aa16.39■□□□□ 0.21
PTCH1-213ENST00000546820 MKNK2Q9HBH9 465 aa16.39■□□□□ 0.21
PTCH1-213ENST00000546820 CABP5Q9NP86 173 aa16.39■□□□□ 0.21
PTCH1-213ENST00000546820 ZMYM6O95789 1325 aa16.39■□□□□ 0.21
PTCH1-213ENST00000546820 NAV1Q8NEY1 1877 aa16.38■□□□□ 0.21
PTCH1-213ENST00000546820 CYP2D7A0A087X1C5 515 aa16.38■□□□□ 0.21
PTCH1-213ENST00000546820 PPARAQ07869 468 aa16.38■□□□□ 0.21
PTCH1-213ENST00000546820 VGLL4Q14135 290 aa16.38■□□□□ 0.21
PTCH1-213ENST00000546820 C16orf86Q6ZW13 317 aa16.38■□□□□ 0.21
PTCH1-213ENST00000546820 ERO1BQ86YB8 467 aa16.38■□□□□ 0.21
PTCH1-213ENST00000546820 SCYL3Q8IZE3 742 aa16.38■□□□□ 0.21
PTCH1-213ENST00000546820 DYNLL2Q96FJ2 89 aa16.38■□□□□ 0.21
PTCH1-213ENST00000546820 CLMNQ96JQ2 1002 aa16.38■□□□□ 0.21
PTCH1-213ENST00000546820 CCDC17Q96LX7 622 aa16.38■□□□□ 0.21
PTCH1-213ENST00000546820 ELP3Q9H9T3 547 aa16.38■□□□□ 0.21
PTCH1-213ENST00000546820 BAZ2AQ9UIF9 1905 aaKnown RBP16.37■□□□□ 0.21
PTCH1-213ENST00000546820 ZNF213O14771 459 aa16.37■□□□□ 0.21
PTCH1-213ENST00000546820 FOXP2O15409 715 aa16.37■□□□□ 0.21
PTCH1-213ENST00000546820 EIF5BO60841 1220 aaKnown RBP16.37■□□□□ 0.21
PTCH1-213ENST00000546820 ASNSP08243 561 aa16.37■□□□□ 0.21
PTCH1-213ENST00000546820 SLURP2P0DP57 97 aa16.37■□□□□ 0.21
PTCH1-213ENST00000546820 CDK8P49336 464 aa16.37■□□□□ 0.21
PTCH1-213ENST00000546820 GRM1Q13255 1194 aa16.37■□□□□ 0.21
PTCH1-213ENST00000546820 CYP4F22Q6NT55 531 aa16.37■□□□□ 0.21
PTCH1-213ENST00000546820 ZNF444Q8N0Y2 327 aaPredicted RBP16.37■□□□□ 0.21
PTCH1-213ENST00000546820 CAPNS2Q96L46 248 aa16.37■□□□□ 0.21
PTCH1-213ENST00000546820 ANAPC4Q9UJX5 808 aa16.37■□□□□ 0.21
PTCH1-213ENST00000546820 U3KPZ7 1027 aaPredicted RBP16.37■□□□□ 0.21
PTCH1-213ENST00000546820 WDR33Q9C0J8 1336 aaKnown RBP16.37■□□□□ 0.21
PTCH1-213ENST00000546820 SLC10A3P09131 477 aa16.36■□□□□ 0.21
PTCH1-213ENST00000546820 ZBTB48P10074 688 aaPredicted RBP16.36■□□□□ 0.21
PTCH1-213ENST00000546820 SHMT1P34896 483 aa16.36■□□□□ 0.21
PTCH1-213ENST00000546820 PPATQ06203 517 aa16.36■□□□□ 0.21
PTCH1-213ENST00000546820 NOGQ13253 232 aa16.36■□□□□ 0.21
PTCH1-213ENST00000546820 IMMTQ16891 758 aaKnown RBP16.36■□□□□ 0.21
PTCH1-213ENST00000546820 ABCB5Q2M3G0 1257 aa16.36■□□□□ 0.21
PTCH1-213ENST00000546820 SPRYD7Q5W111 196 aa16.36■□□□□ 0.21
PTCH1-213ENST00000546820 OPTNQ96CV9 577 aa16.36■□□□□ 0.21
PTCH1-213ENST00000546820 TBC1D2Q9BYX2 928 aa16.36■□□□□ 0.21
PTCH1-213ENST00000546820 DNAJC18Q9H819 358 aa16.36■□□□□ 0.21
PTCH1-213ENST00000546820 SNCAIPQ9Y6H5 919 aa16.36■□□□□ 0.21
PTCH1-213ENST00000546820 SPDYE5A6NIY4 337 aa16.35■□□□□ 0.21
PTCH1-213ENST00000546820 USP17L5A8MUK1 530 aa16.35■□□□□ 0.21
PTCH1-213ENST00000546820 MPHOSPH10O00566 681 aaKnown RBP16.35■□□□□ 0.21
PTCH1-213ENST00000546820 MAP2K2P36507 400 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms