RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 EHD4Q9H223 541 aa20.17■□□□□ 0.82
CCDC38-203ENST00000546803 TAOK2Q9UL54 1235 aa20.17■□□□□ 0.82
CCDC38-203ENST00000546803 INPP5BP32019 993 aa20.16■□□□□ 0.82
CCDC38-203ENST00000546803 MCMDC2Q4G0Z9 681 aa20.16■□□□□ 0.82
CCDC38-203ENST00000546803 NOL9Q5SY16 702 aaKnown RBP20.16■□□□□ 0.82
CCDC38-203ENST00000546803 AMOTL1Q8IY63 956 aa20.16■□□□□ 0.82
CCDC38-203ENST00000546803 GSG1L2A8MUP6 293 aa20.15■□□□□ 0.82
CCDC38-203ENST00000546803 PATL2C9JE40 543 aaKnown RBP20.15■□□□□ 0.82
CCDC38-203ENST00000546803 CTNND1O60716 968 aaKnown RBP20.15■□□□□ 0.82
CCDC38-203ENST00000546803 ZBTB48P10074 688 aaPredicted RBP20.15■□□□□ 0.82
CCDC38-203ENST00000546803 SPRYD7Q5W111 196 aa20.15■□□□□ 0.82
CCDC38-203ENST00000546803 ZKSCAN4Q969J2 545 aaPredicted RBP20.15■□□□□ 0.82
CCDC38-203ENST00000546803 ELP3Q9H9T3 547 aa20.15■□□□□ 0.82
CCDC38-203ENST00000546803 DIAPH3Q9NSV4 1193 aa20.15■□□□□ 0.82
CCDC38-203ENST00000546803 SERPINB13Q9UIV8 391 aa20.15■□□□□ 0.82
CCDC38-203ENST00000546803 AOC2O75106 756 aa20.14■□□□□ 0.81
CCDC38-203ENST00000546803 PLCD1P51178 756 aa20.14■□□□□ 0.81
CCDC38-203ENST00000546803 NMIQ13287 307 aaPredicted RBP20.14■□□□□ 0.81
CCDC38-203ENST00000546803 ERO1BQ86YB8 467 aa20.14■□□□□ 0.81
CCDC38-203ENST00000546803 REM2Q8IYK8 340 aaPredicted RBP20.14■□□□□ 0.81
CCDC38-203ENST00000546803 WNK4Q96J92 1243 aa20.14■□□□□ 0.81
CCDC38-203ENST00000546803 FAM227BQ96M60 508 aa20.14■□□□□ 0.81
CCDC38-203ENST00000546803 NACAP1Q9BZK3 213 aa20.14■□□□□ 0.81
CCDC38-203ENST00000546803 SNCAIPQ9Y6H5 919 aa20.14■□□□□ 0.81
CCDC38-203ENST00000546803 A0A0D9SFI3 127 aa20.13■□□□□ 0.81
CCDC38-203ENST00000546803 SPDYE5A6NIY4 337 aa20.13■□□□□ 0.81
CCDC38-203ENST00000546803 FAM196BA6NMK8 535 aa20.13■□□□□ 0.81
CCDC38-203ENST00000546803 USP17L12C9JPN9 530 aa20.13■□□□□ 0.81
CCDC38-203ENST00000546803 USP17L21D6R901 530 aa20.13■□□□□ 0.81
CCDC38-203ENST00000546803 APPP05067 770 aa20.13■□□□□ 0.81
CCDC38-203ENST00000546803 SLURP2P0DP57 97 aa20.13■□□□□ 0.81
CCDC38-203ENST00000546803 MFAP1P55081 439 aaKnown RBP20.13■□□□□ 0.81
CCDC38-203ENST00000546803 SLC4A8Q2Y0W8 1093 aa20.13■□□□□ 0.81
CCDC38-203ENST00000546803 C12orf60Q5U649 245 aa20.13■□□□□ 0.81
CCDC38-203ENST00000546803 SCYL3Q8IZE3 742 aa20.13■□□□□ 0.81
CCDC38-203ENST00000546803 OPTNQ96CV9 577 aa20.13■□□□□ 0.81
CCDC38-203ENST00000546803 PICK1Q9NRD5 415 aa20.13■□□□□ 0.81
CCDC38-203ENST00000546803 ARPP21Q9UBL0 812 aaPredicted RBP20.13■□□□□ 0.81
CCDC38-203ENST00000546803 KIF23Q02241 960 aaPredicted RBP20.12■□□□□ 0.81
CCDC38-203ENST00000546803 MAP2K1Q02750 393 aaPredicted RBP20.12■□□□□ 0.81
CCDC38-203ENST00000546803 GABPAQ06546 454 aa20.12■□□□□ 0.81
CCDC38-203ENST00000546803 SBK1Q52WX2 424 aa20.12■□□□□ 0.81
CCDC38-203ENST00000546803 CTR9Q6PD62 1173 aa20.12■□□□□ 0.81
CCDC38-203ENST00000546803 DNAJC18Q9H819 358 aa20.12■□□□□ 0.81
CCDC38-203ENST00000546803 GINM1Q9NU53 330 aa20.12■□□□□ 0.81
CCDC38-203ENST00000546803 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.12■□□□□ 0.81
CCDC38-203ENST00000546803 CAP2P40123 477 aa20.11■□□□□ 0.81
CCDC38-203ENST00000546803 PPATQ06203 517 aa20.11■□□□□ 0.81
CCDC38-203ENST00000546803 CCDC129Q6ZRS4 1044 aa20.11■□□□□ 0.81
CCDC38-203ENST00000546803 IFNL3Q8IZI9 196 aa20.11■□□□□ 0.81
CCDC38-203ENST00000546803 CCDC171Q6TFL3 1326 aa20.1■□□□□ 0.81
CCDC38-203ENST00000546803 MANSC4A6NHS7 340 aaPredicted RBP20.1■□□□□ 0.81
CCDC38-203ENST00000546803 CYP2D6P10635 497 aa20.1■□□□□ 0.81
CCDC38-203ENST00000546803 GJA5P36382 358 aa20.1■□□□□ 0.81
CCDC38-203ENST00000546803 TDO2P48775 406 aa20.1■□□□□ 0.81
CCDC38-203ENST00000546803 INHBEP58166 350 aa20.1■□□□□ 0.81
CCDC38-203ENST00000546803 PPIL2Q13356 520 aa20.1■□□□□ 0.81
CCDC38-203ENST00000546803 BMP2KLQ5H9B9 411 aa20.1■□□□□ 0.81
CCDC38-203ENST00000546803 TATDN1Q6P1N9 297 aa20.1■□□□□ 0.81
CCDC38-203ENST00000546803 CWC27Q6UX04 472 aaKnown RBP20.1■□□□□ 0.81
CCDC38-203ENST00000546803 ZIC5Q96T25 663 aa20.1■□□□□ 0.81
CCDC38-203ENST00000546803 EPB41L4AQ9HCS5 686 aaPredicted RBP20.1■□□□□ 0.81
CCDC38-203ENST00000546803 SWAP70Q9UH65 585 aa20.1■□□□□ 0.81
CCDC38-203ENST00000546803 PTPRAP18433 802 aa20.09■□□□□ 0.81
CCDC38-203ENST00000546803 SREBF2Q12772 1141 aa20.09■□□□□ 0.81
CCDC38-203ENST00000546803 MKRN3Q13064 507 aaKnown RBP20.09■□□□□ 0.81
CCDC38-203ENST00000546803 SKAP1Q86WV1 359 aa20.09■□□□□ 0.81
CCDC38-203ENST00000546803 RUFY2Q8WXA3 655 aa20.09■□□□□ 0.81
CCDC38-203ENST00000546803 OTUD5Q96G74 571 aa20.09■□□□□ 0.81
CCDC38-203ENST00000546803 NAPBQ9H115 298 aa20.09■□□□□ 0.81
CCDC38-203ENST00000546803 ASNSP08243 561 aa20.08■□□□□ 0.81
CCDC38-203ENST00000546803 CHMLP26374 656 aa20.08■□□□□ 0.81
CCDC38-203ENST00000546803 RRP1BQ14684 758 aaKnown RBP20.08■□□□□ 0.81
CCDC38-203ENST00000546803 ALX1Q15699 326 aa20.08■□□□□ 0.81
CCDC38-203ENST00000546803 ZNF589Q86UQ0 364 aaPredicted RBP20.08■□□□□ 0.81
CCDC38-203ENST00000546803 CNKSR2Q8WXI2 1034 aa20.08■□□□□ 0.81
CCDC38-203ENST00000546803 TBC1D2Q9BYX2 928 aa20.08■□□□□ 0.81
CCDC38-203ENST00000546803 MYH7P12883 1935 aa20.08■□□□□ 0.8
CCDC38-203ENST00000546803 CYP2D7A0A087X1C5 515 aa20.07■□□□□ 0.8
CCDC38-203ENST00000546803 SHMT1P34896 483 aa20.07■□□□□ 0.8
CCDC38-203ENST00000546803 TM4SF4P48230 202 aa20.07■□□□□ 0.8
CCDC38-203ENST00000546803 GTF2A2P52657 109 aa20.07■□□□□ 0.8
CCDC38-203ENST00000546803 CERKLQ49MI3 558 aaPredicted RBP20.07■□□□□ 0.8
CCDC38-203ENST00000546803 BEGAINQ9BUH8 593 aa20.07■□□□□ 0.8
CCDC38-203ENST00000546803 WBP1LQ9NX94 342 aa20.07■□□□□ 0.8
CCDC38-203ENST00000546803 ZHX2Q9Y6X8 837 aa20.07■□□□□ 0.8
CCDC38-203ENST00000546803 RAD50Q92878 1312 aa20.06■□□□□ 0.8
CCDC38-203ENST00000546803 TESPA1A2RU30 521 aaPredicted RBP20.06■□□□□ 0.8
CCDC38-203ENST00000546803 MINDY4BA8MYZ0 360 aa20.06■□□□□ 0.8
CCDC38-203ENST00000546803 CXCL11O14625 94 aa20.06■□□□□ 0.8
CCDC38-203ENST00000546803 IRF6O14896 467 aa20.06■□□□□ 0.8
CCDC38-203ENST00000546803 FOXP2O15409 715 aa20.06■□□□□ 0.8
CCDC38-203ENST00000546803 HSPD1P10809 573 aaKnown RBP20.06■□□□□ 0.8
CCDC38-203ENST00000546803 EVX2Q03828 476 aa20.06■□□□□ 0.8
CCDC38-203ENST00000546803 SNAPC2Q13487 334 aa20.06■□□□□ 0.8
CCDC38-203ENST00000546803 VPS53Q5VIR6 699 aa20.06■□□□□ 0.8
CCDC38-203ENST00000546803 C16orf86Q6ZW13 317 aa20.06■□□□□ 0.8
CCDC38-203ENST00000546803 DYNLL2Q96FJ2 89 aa20.06■□□□□ 0.8
CCDC38-203ENST00000546803 MS4A4AQ96JQ5 239 aa20.06■□□□□ 0.8
CCDC38-203ENST00000546803 KCNH4Q9UQ05 1017 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms