RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 CST9Q5W186 159 aa14.02□□□□□ -0.17
SNHG1-221ENST00000544983 CCDC129Q6ZRS4 1044 aa14.02□□□□□ -0.17
SNHG1-221ENST00000544983 CRACR2BQ8N4Y2 399 aaPredicted RBP14.02□□□□□ -0.17
SNHG1-221ENST00000544983 HHIPL1Q96JK4 782 aa14.02□□□□□ -0.17
SNHG1-221ENST00000544983 ZNF341Q9BYN7 854 aa14.02□□□□□ -0.17
SNHG1-221ENST00000544983 CREBZFQ9NS37 354 aa14.02□□□□□ -0.17
SNHG1-221ENST00000544983 SWAP70Q9UH65 585 aa14.02□□□□□ -0.17
SNHG1-221ENST00000544983 SERPINB13Q9UIV8 391 aa14.02□□□□□ -0.17
SNHG1-221ENST00000544983 PAPPA2Q9BXP8 1791 aa14.01□□□□□ -0.17
SNHG1-221ENST00000544983 EPB41L2O43491 1005 aaKnown RBP14.01□□□□□ -0.17
SNHG1-221ENST00000544983 CTR9Q6PD62 1173 aa14.01□□□□□ -0.17
SNHG1-221ENST00000544983 KLRG1Q96E93 195 aa14.01□□□□□ -0.17
SNHG1-221ENST00000544983 ZNF408Q9H9D4 720 aa14.01□□□□□ -0.17
SNHG1-221ENST00000544983 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.01□□□□□ -0.17
SNHG1-221ENST00000544983 EPB41L4AQ9HCS5 686 aaPredicted RBP14.01□□□□□ -0.17
SNHG1-221ENST00000544983 GINM1Q9NU53 330 aa14.01□□□□□ -0.17
SNHG1-221ENST00000544983 SAP30BPQ9UHR5 308 aaKnown RBP14.01□□□□□ -0.17
SNHG1-221ENST00000544983 ZNF112Q9UJU3 913 aa14.01□□□□□ -0.17
SNHG1-221ENST00000544983 NAV1Q8NEY1 1877 aa14□□□□□ -0.17
SNHG1-221ENST00000544983 USP2O75604 605 aaPredicted RBP14□□□□□ -0.17
SNHG1-221ENST00000544983 REC8O95072 547 aa14□□□□□ -0.17
SNHG1-221ENST00000544983 FGAP02671 866 aa14□□□□□ -0.17
SNHG1-221ENST00000544983 PCP11498 1178 aaKnown RBP14□□□□□ -0.17
SNHG1-221ENST00000544983 GABPAQ06546 454 aa14□□□□□ -0.17
SNHG1-221ENST00000544983 TTLL12Q14166 644 aaPredicted RBP14□□□□□ -0.17
SNHG1-221ENST00000544983 ANAPC4Q9UJX5 808 aa14□□□□□ -0.17
SNHG1-221ENST00000544983 U3KPZ7 1027 aaPredicted RBP14□□□□□ -0.17
SNHG1-221ENST00000544983 DDX60LQ5H9U9 1706 aaKnown RBP14□□□□□ -0.17
SNHG1-221ENST00000544983 SSC5DA1L4H1 1573 aa14□□□□□ -0.17
SNHG1-221ENST00000544983 ROBO3Q96MS0 1386 aa13.99□□□□□ -0.17
SNHG1-221ENST00000544983 FOXP2O15409 715 aa13.99□□□□□ -0.17
SNHG1-221ENST00000544983 CTNND1O60716 968 aaKnown RBP13.99□□□□□ -0.17
SNHG1-221ENST00000544983 PLCD1P51178 756 aa13.99□□□□□ -0.17
SNHG1-221ENST00000544983 MAP3K9P80192 1104 aa13.99□□□□□ -0.17
SNHG1-221ENST00000544983 LDLRAD1Q5T700 205 aa13.99□□□□□ -0.17
SNHG1-221ENST00000544983 VPS53Q5VIR6 699 aa13.99□□□□□ -0.17
SNHG1-221ENST00000544983 DLK2Q6UY11 383 aa13.99□□□□□ -0.17
SNHG1-221ENST00000544983 SAPCD2Q86UD0 394 aa13.99□□□□□ -0.17
SNHG1-221ENST00000544983 CDAN1Q8IWY9 1227 aa13.99□□□□□ -0.17
SNHG1-221ENST00000544983 ANKRD13AQ8IZ07 590 aa13.99□□□□□ -0.17
SNHG1-221ENST00000544983 MAP4K1Q92918 833 aa13.99□□□□□ -0.17
SNHG1-221ENST00000544983 ANGEL1Q9UNK9 670 aaKnown RBP13.99□□□□□ -0.17
SNHG1-221ENST00000544983 TLL2Q9Y6L7 1015 aa13.99□□□□□ -0.17
SNHG1-221ENST00000544983 BAZ2AQ9UIF9 1905 aaKnown RBP13.98□□□□□ -0.17
SNHG1-221ENST00000544983 MINDY4BA8MYZ0 360 aa13.98□□□□□ -0.17
SNHG1-221ENST00000544983 FMR1Q06787 632 aaKnown RBP eCLIP13.98□□□□□ -0.17
SNHG1-221ENST00000544983 PDE4BQ07343 736 aa13.98□□□□□ -0.17
SNHG1-221ENST00000544983 PPARAQ07869 468 aa13.98□□□□□ -0.17
SNHG1-221ENST00000544983 IMMTQ16891 758 aaKnown RBP13.98□□□□□ -0.17
SNHG1-221ENST00000544983 TATDN1Q6P1N9 297 aa13.98□□□□□ -0.17
SNHG1-221ENST00000544983 C16orf86Q6ZW13 317 aa13.98□□□□□ -0.17
SNHG1-221ENST00000544983 MIGA2Q7L4E1 593 aa13.98□□□□□ -0.17
SNHG1-221ENST00000544983 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.98□□□□□ -0.17
SNHG1-221ENST00000544983 CCDC17Q96LX7 622 aa13.98□□□□□ -0.17
SNHG1-221ENST00000544983 WRNIP1Q96S55 665 aa13.98□□□□□ -0.17
SNHG1-221ENST00000544983 CSADQ9Y600 493 aa13.98□□□□□ -0.17
SNHG1-221ENST00000544983 PHF20L1A8MW92 1017 aa13.97□□□□□ -0.17
SNHG1-221ENST00000544983 ZNF213O14771 459 aa13.97□□□□□ -0.17
SNHG1-221ENST00000544983 HUNKP57058 714 aa13.97□□□□□ -0.17
SNHG1-221ENST00000544983 NOL9Q5SY16 702 aaKnown RBP13.97□□□□□ -0.17
SNHG1-221ENST00000544983 TBC1D2Q9BYX2 928 aa13.97□□□□□ -0.17
SNHG1-221ENST00000544983 IL25Q9H293 177 aa13.97□□□□□ -0.17
SNHG1-221ENST00000544983 RNF41Q9H4P4 317 aaPredicted RBP13.97□□□□□ -0.17
SNHG1-221ENST00000544983 ANO2Q9NQ90 1003 aa13.97□□□□□ -0.17
SNHG1-221ENST00000544983 ABT1Q9ULW3 272 aaKnown RBP13.97□□□□□ -0.17
SNHG1-221ENST00000544983 CAP2P40123 477 aa13.96□□□□□ -0.17
SNHG1-221ENST00000544983 CERKLQ49MI3 558 aaPredicted RBP13.96□□□□□ -0.17
SNHG1-221ENST00000544983 CCDC102AQ96A19 550 aa13.96□□□□□ -0.17
SNHG1-221ENST00000544983 SLC10A4Q96EP9 437 aa13.96□□□□□ -0.17
SNHG1-221ENST00000544983 LSG1Q9H089 658 aaKnown RBP13.96□□□□□ -0.17
SNHG1-221ENST00000544983 MKNK2Q9HBH9 465 aa13.96□□□□□ -0.17
SNHG1-221ENST00000544983 PICK1Q9NRD5 415 aa13.96□□□□□ -0.17
SNHG1-221ENST00000544983 RASSF10A6NK89 507 aa13.95□□□□□ -0.18
SNHG1-221ENST00000544983 UBE2Q2LH0YL09 131 aa13.95□□□□□ -0.18
SNHG1-221ENST00000544983 ASNSP08243 561 aa13.95□□□□□ -0.18
SNHG1-221ENST00000544983 FGRP09769 529 aa13.95□□□□□ -0.18
SNHG1-221ENST00000544983 CYP2D6P10635 497 aa13.95□□□□□ -0.18
SNHG1-221ENST00000544983 SHMT1P34896 483 aa13.95□□□□□ -0.18
SNHG1-221ENST00000544983 CDK8P49336 464 aa13.95□□□□□ -0.18
SNHG1-221ENST00000544983 PTH1RQ03431 593 aa13.95□□□□□ -0.18
SNHG1-221ENST00000544983 PRKG1Q13976 671 aa13.95□□□□□ -0.18
SNHG1-221ENST00000544983 RNF20Q5VTR2 975 aa13.95□□□□□ -0.18
SNHG1-221ENST00000544983 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.95□□□□□ -0.18
SNHG1-221ENST00000544983 SCYL3Q8IZE3 742 aa13.95□□□□□ -0.18
SNHG1-221ENST00000544983 DNAJC18Q9H819 358 aa13.95□□□□□ -0.18
SNHG1-221ENST00000544983 CABP5Q9NP86 173 aa13.95□□□□□ -0.18
SNHG1-221ENST00000544983 SIPA1L1O43166 1804 aa13.94□□□□□ -0.18
SNHG1-221ENST00000544983 LAMB1P07942 1786 aa13.94□□□□□ -0.18
SNHG1-221ENST00000544983 CYP2D7A0A087X1C5 515 aa13.94□□□□□ -0.18
SNHG1-221ENST00000544983 ORC4O43929 436 aa13.94□□□□□ -0.18
SNHG1-221ENST00000544983 ECE1P42892 770 aa13.94□□□□□ -0.18
SNHG1-221ENST00000544983 VGLL4Q14135 290 aa13.94□□□□□ -0.18
SNHG1-221ENST00000544983 SLC4A8Q2Y0W8 1093 aa13.94□□□□□ -0.18
SNHG1-221ENST00000544983 DEFB115Q30KQ5 88 aa13.94□□□□□ -0.18
SNHG1-221ENST00000544983 PPP4R3BQ5MIZ7 849 aa13.94□□□□□ -0.18
SNHG1-221ENST00000544983 AKNAD1Q5T1N1 836 aa13.94□□□□□ -0.18
SNHG1-221ENST00000544983 RGMBQ6NW40 437 aa13.94□□□□□ -0.18
SNHG1-221ENST00000544983 ERO1BQ86YB8 467 aa13.94□□□□□ -0.18
SNHG1-221ENST00000544983 ZNF444Q8N0Y2 327 aaPredicted RBP13.94□□□□□ -0.18
SNHG1-221ENST00000544983 STAG1Q8WVM7 1258 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms