RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	GRAP	Q13588	217 aa		13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	CPLX2	Q6PUV4	134 aa	Known RBP	13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	DPP8	Q6V1X1	898 aa	Predicted RBP	13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	TMC4	Q7Z404	712 aa		13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	BRAP	Q7Z569	592 aa		13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	SGMS1	Q86VZ5	419 aa		13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	MPND	Q8N594	471 aa		13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	GRAPL	Q8TC17	118 aa	Predicted RBP	13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	C8orf76	Q96K31	380 aa		13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	NACAP1	Q9BZK3	213 aa		13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	KRT23	Q9C075	422 aa		13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	TNMD	Q9H2S6	317 aa		13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	ARMT1	Q9H993	441 aa		13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	DACT1	Q9NYF0	836 aa		13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	ORC3	Q9UBD5	711 aa	Predicted RBP	13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	SNED1	Q8TER0	1413 aa		13.11	□□□□□ -0.31
LDHA-222	ENST00000543695	DICER1	Q9UPY3	1922 aa	Known RBP	13.1	□□□□□ -0.31
LDHA-222	ENST00000543695	GSG1L2	A8MUP6	293 aa		13.1	□□□□□ -0.31
LDHA-222	ENST00000543695	SEMA3E	O15041	775 aa		13.1	□□□□□ -0.31
LDHA-222	ENST00000543695	KDM4A	O75164	1064 aa		13.1	□□□□□ -0.31
LDHA-222	ENST00000543695	FOSB	P53539	338 aa		13.1	□□□□□ -0.31
LDHA-222	ENST00000543695	TYRO3	Q06418	890 aa		13.1	□□□□□ -0.31
LDHA-222	ENST00000543695	TPRN	Q4KMQ1	711 aa		13.1	□□□□□ -0.31
LDHA-222	ENST00000543695	AKNAD1	Q5T1N1	836 aa		13.1	□□□□□ -0.31
LDHA-222	ENST00000543695	FBXO18	Q8NFZ0	1043 aa		13.1	□□□□□ -0.31
LDHA-222	ENST00000543695	STAG1	Q8WVM7	1258 aa		13.1	□□□□□ -0.31
LDHA-222	ENST00000543695	USP28	Q96RU2	1077 aa		13.1	□□□□□ -0.31
LDHA-222	ENST00000543695	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.1	□□□□□ -0.31
LDHA-222	ENST00000543695	CREBZF	Q9NS37	354 aa		13.1	□□□□□ -0.31
LDHA-222	ENST00000543695	RTEL1	Q9NZ71	1219 aa		13.1	□□□□□ -0.31
LDHA-222	ENST00000543695	ZKSCAN5	Q9Y2L8	839 aa		13.1	□□□□□ -0.31
LDHA-222	ENST00000543695	DUOX1	Q9NRD9	1551 aa		13.1	□□□□□ -0.31
LDHA-222	ENST00000543695	NEDD4	P46934	1319 aa		13.1	□□□□□ -0.31
LDHA-222	ENST00000543695	STK36	Q9NRP7	1315 aa		13.1	□□□□□ -0.31
LDHA-222	ENST00000543695	COL1A1	P02452	1464 aa	Predicted RBP	13.1	□□□□□ -0.31
LDHA-222	ENST00000543695		B4E1Z4	1266 aa		13.09	□□□□□ -0.31
LDHA-222	ENST00000543695	SNAP23	O00161	211 aa		13.09	□□□□□ -0.31
LDHA-222	ENST00000543695	ZNF500	O60304	480 aa	Predicted RBP	13.09	□□□□□ -0.31
LDHA-222	ENST00000543695	YEATS4	O95619	227 aa		13.09	□□□□□ -0.31
LDHA-222	ENST00000543695	CAVIN2	O95810	425 aa		13.09	□□□□□ -0.31
LDHA-222	ENST00000543695	METAP2	P50579	478 aa	Known RBP eCLIP	13.09	□□□□□ -0.31	5e-10	■■□□□ 11.5
LDHA-222	ENST00000543695	AOC3	Q16853	763 aa		13.09	□□□□□ -0.31
LDHA-222	ENST00000543695	TMED8	Q6PL24	325 aa	Predicted RBP	13.09	□□□□□ -0.31
LDHA-222	ENST00000543695	APOA5	Q6Q788	366 aa		13.09	□□□□□ -0.31
LDHA-222	ENST00000543695	FAM200A	Q8TCP9	573 aa		13.09	□□□□□ -0.31
LDHA-222	ENST00000543695	IGDCC4	Q8TDY8	1250 aa		13.09	□□□□□ -0.31
LDHA-222	ENST00000543695	RNF41	Q9H4P4	317 aa	Predicted RBP	13.09	□□□□□ -0.31
LDHA-222	ENST00000543695	LY9	Q9HBG7	655 aa		13.09	□□□□□ -0.31
LDHA-222	ENST00000543695	LRP2BP	Q9P2M1	347 aa		13.09	□□□□□ -0.31
LDHA-222	ENST00000543695	DENND2A	Q9ULE3	1009 aa		13.09	□□□□□ -0.31
LDHA-222	ENST00000543695	ZNRF3	Q9ULT6	936 aa		13.09	□□□□□ -0.31
LDHA-222	ENST00000543695	MRVI1	Q9Y6F6	885 aa		13.09	□□□□□ -0.31
LDHA-222	ENST00000543695		A0A1W2PQ27	194 aa		13.08	□□□□□ -0.32
LDHA-222	ENST00000543695		A0A1W2PQ64	194 aa		13.08	□□□□□ -0.32
LDHA-222	ENST00000543695		A0A1W2PQD8	194 aa		13.08	□□□□□ -0.32
LDHA-222	ENST00000543695	ZBTB43	O43298	467 aa		13.08	□□□□□ -0.32
LDHA-222	ENST00000543695	NR1I2	O75469	434 aa		13.08	□□□□□ -0.32
LDHA-222	ENST00000543695	ITGBL1	O95965	494 aa	Predicted RBP	13.08	□□□□□ -0.32
LDHA-222	ENST00000543695	RCAN1	P53805	252 aa		13.08	□□□□□ -0.32
LDHA-222	ENST00000543695	CAVIN4	Q5BKX8	364 aa		13.08	□□□□□ -0.32
LDHA-222	ENST00000543695	TMEM67	Q5HYA8	995 aa		13.08	□□□□□ -0.32
LDHA-222	ENST00000543695	CCDC73	Q6ZRK6	1079 aa		13.08	□□□□□ -0.32
LDHA-222	ENST00000543695	SLC51A	Q86UW1	340 aa		13.08	□□□□□ -0.32
LDHA-222	ENST00000543695	CCAR1	Q8IX12	1150 aa	Known RBP	13.08	□□□□□ -0.32
LDHA-222	ENST00000543695	LCORL	Q8N3X6	602 aa		13.08	□□□□□ -0.32
LDHA-222	ENST00000543695	ANKRD2	Q9GZV1	360 aa		13.08	□□□□□ -0.32
LDHA-222	ENST00000543695	POLR3E	Q9NVU0	708 aa		13.08	□□□□□ -0.32
LDHA-222	ENST00000543695	ANAPC4	Q9UJX5	808 aa		13.08	□□□□□ -0.32
LDHA-222	ENST00000543695	MINPP1	Q9UNW1	487 aa		13.08	□□□□□ -0.32
LDHA-222	ENST00000543695	SLC4A4	Q9Y6R1	1079 aa		13.08	□□□□□ -0.32
LDHA-222	ENST00000543695	GOLGA8A	A7E2F4	631 aa		13.07	□□□□□ -0.32
LDHA-222	ENST00000543695	IGSF3	O75054	1194 aa		13.07	□□□□□ -0.32
LDHA-222	ENST00000543695	ADCY5	O95622	1261 aa		13.07	□□□□□ -0.32
LDHA-222	ENST00000543695	PTMA	P06454	111 aa	Known RBP	13.07	□□□□□ -0.32
LDHA-222	ENST00000543695	CYP7A1	P22680	504 aa		13.07	□□□□□ -0.32
LDHA-222	ENST00000543695	TDO2	P48775	406 aa		13.07	□□□□□ -0.32
LDHA-222	ENST00000543695	GUCY1B3	Q02153	619 aa		13.07	□□□□□ -0.32
LDHA-222	ENST00000543695	CTDSPL2	Q05D32	466 aa		13.07	□□□□□ -0.32
LDHA-222	ENST00000543695	KIAA2012	Q0VF49	1180 aa		13.07	□□□□□ -0.32
LDHA-222	ENST00000543695	MFSD6	Q6ZSS7	791 aa		13.07	□□□□□ -0.32
LDHA-222	ENST00000543695	FBXO33	Q7Z6M2	555 aa		13.07	□□□□□ -0.32
LDHA-222	ENST00000543695	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.07	□□□□□ -0.32
LDHA-222	ENST00000543695	USP25	Q9UHP3	1055 aa		13.07	□□□□□ -0.32
LDHA-222	ENST00000543695	PASK	Q96RG2	1323 aa		13.07	□□□□□ -0.32
LDHA-222	ENST00000543695	NAV1	Q8NEY1	1877 aa		13.06	□□□□□ -0.32
LDHA-222	ENST00000543695	CDK5RAP2	Q96SN8	1893 aa		13.06	□□□□□ -0.32
LDHA-222	ENST00000543695	MAGEB6P1	A0A0J9YX57	407 aa		13.06	□□□□□ -0.32
LDHA-222	ENST00000543695	CCDC69	A6NI79	296 aa		13.06	□□□□□ -0.32
LDHA-222	ENST00000543695	TMEM88B	A6NKF7	163 aa		13.06	□□□□□ -0.32
LDHA-222	ENST00000543695	IFIT3	O14879	490 aa	Known RBP	13.06	□□□□□ -0.32
LDHA-222	ENST00000543695	EPS15	P42566	896 aa		13.06	□□□□□ -0.32
LDHA-222	ENST00000543695	SCNN1D	P51172	638 aa		13.06	□□□□□ -0.32
LDHA-222	ENST00000543695	RPS8	P62241	208 aa	Known RBP	13.06	□□□□□ -0.32
LDHA-222	ENST00000543695	KIF23	Q02241	960 aa	Predicted RBP	13.06	□□□□□ -0.32
LDHA-222	ENST00000543695	FAM160A1	Q05DH4	1040 aa		13.06	□□□□□ -0.32
LDHA-222	ENST00000543695	CXCL9	Q07325	125 aa		13.06	□□□□□ -0.32
LDHA-222	ENST00000543695	SART3	Q15020	963 aa	Known RBP	13.06	□□□□□ -0.32
LDHA-222	ENST00000543695	TNIP1	Q15025	636 aa		13.06	□□□□□ -0.32
LDHA-222	ENST00000543695	CAMK4	Q16566	473 aa		13.06	□□□□□ -0.32
LDHA-222	ENST00000543695	MYSM1	Q5VVJ2	828 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms