RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 PLPPR2Q96GM1 343 aa6.66□□□□□ -1.34
SNHG1-217ENST00000541578 PSMG3-AS1Q96PY0 264 aa6.66□□□□□ -1.34
SNHG1-217ENST00000541578 DUSP23Q9BVJ7 150 aa6.66□□□□□ -1.34
SNHG1-217ENST00000541578 ZC3H7BQ9UGR2 993 aaKnown RBP6.66□□□□□ -1.34
SNHG1-217ENST00000541578 SNCAIPQ9Y6H5 919 aa6.66□□□□□ -1.34
SNHG1-217ENST00000541578 LEFTY1O75610 366 aa6.65□□□□□ -1.34
SNHG1-217ENST00000541578 PRNPP04156 253 aa6.65□□□□□ -1.34
SNHG1-217ENST00000541578 ZNF326Q5BKZ1 582 aaKnown RBP6.65□□□□□ -1.34
SNHG1-217ENST00000541578 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-217ENST00000541578 TOP6BLQ8N6T0 577 aa6.65□□□□□ -1.34
SNHG1-217ENST00000541578 CRELD1Q96HD1 420 aa6.65□□□□□ -1.34
SNHG1-217ENST00000541578 BCL2L13Q9BXK5 485 aa6.65□□□□□ -1.34
SNHG1-217ENST00000541578 MIR1-1HGQ9H1L0 117 aa6.65□□□□□ -1.34
SNHG1-217ENST00000541578 PCDHB5Q9Y5E4 795 aa6.65□□□□□ -1.34
SNHG1-217ENST00000541578 OAS3Q9Y6K5 1087 aaKnown RBP6.65□□□□□ -1.34
SNHG1-217ENST00000541578 PRAMEF27A3QJZ7 478 aa6.64□□□□□ -1.35
SNHG1-217ENST00000541578 SEPT6Q14141 434 aa6.64□□□□□ -1.35
SNHG1-217ENST00000541578 WIPI1Q5MNZ9 446 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-217ENST00000541578 DIEXFQ68CQ4 756 aaKnown RBP6.64□□□□□ -1.35
SNHG1-217ENST00000541578 VSIG10LQ86VR7 867 aa6.64□□□□□ -1.35
SNHG1-217ENST00000541578 PRDM10Q9NQV6 1147 aa6.64□□□□□ -1.35
SNHG1-217ENST00000541578 CCDC39Q9UFE4 941 aa6.64□□□□□ -1.35
SNHG1-217ENST00000541578 RBM47A0AV96 593 aaKnown RBP6.63□□□□□ -1.35
SNHG1-217ENST00000541578 TFE3P19532 575 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-217ENST00000541578 CDK8P49336 464 aa6.63□□□□□ -1.35
SNHG1-217ENST00000541578 ETF1P62495 437 aaKnown RBP6.63□□□□□ -1.35
SNHG1-217ENST00000541578 TSNAXIP1Q2TAA8 658 aa6.63□□□□□ -1.35
SNHG1-217ENST00000541578 ARHGAP27Q6ZUM4 889 aa6.63□□□□□ -1.35
SNHG1-217ENST00000541578 UBE3DQ7Z6J8 389 aa6.63□□□□□ -1.35
SNHG1-217ENST00000541578 PHC3Q8NDX5 983 aa6.63□□□□□ -1.35
SNHG1-217ENST00000541578 FBXL18Q96ME1 805 aa6.63□□□□□ -1.35
SNHG1-217ENST00000541578 WNT10AQ9GZT5 417 aa6.63□□□□□ -1.35
SNHG1-217ENST00000541578 FAM181AQ8N9Y4 354 aa6.62□□□□□ -1.35
SNHG1-217ENST00000541578 NETO1Q8TDF5 533 aa6.62□□□□□ -1.35
SNHG1-217ENST00000541578 GIPC2Q8TF65 315 aa6.62□□□□□ -1.35
SNHG1-217ENST00000541578 JARID2Q92833 1246 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-217ENST00000541578 TLR6Q9Y2C9 796 aa6.62□□□□□ -1.35
SNHG1-217ENST00000541578 TACC3Q9Y6A5 838 aa6.62□□□□□ -1.35
SNHG1-217ENST00000541578 GFRA2O00451 464 aa6.61□□□□□ -1.35
SNHG1-217ENST00000541578 GRK4P32298 578 aa6.61□□□□□ -1.35
SNHG1-217ENST00000541578 IRAK1P51617 712 aa6.61□□□□□ -1.35
SNHG1-217ENST00000541578 ARMCX6Q7L4S7 300 aa6.61□□□□□ -1.35
SNHG1-217ENST00000541578 CCDC84Q86UT8 332 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-217ENST00000541578 RELL1Q8IUW5 271 aa6.61□□□□□ -1.35
SNHG1-217ENST00000541578 HID1Q8IV36 788 aa6.61□□□□□ -1.35
SNHG1-217ENST00000541578 MKNK2Q9HBH9 465 aa6.61□□□□□ -1.35
SNHG1-217ENST00000541578 USP35Q9P2H5 1018 aa6.61□□□□□ -1.35
SNHG1-217ENST00000541578 GTF2IRD1Q9UHL9 959 aa6.61□□□□□ -1.35
SNHG1-217ENST00000541578 LRIG2O94898 1065 aa6.6□□□□□ -1.35
SNHG1-217ENST00000541578 TP53INP2Q8IXH6 220 aa6.6□□□□□ -1.35
SNHG1-217ENST00000541578 STK11IPQ8N1F8 1099 aa6.6□□□□□ -1.35
SNHG1-217ENST00000541578 PLD6Q8N2A8 252 aaKnown RBP6.6□□□□□ -1.35
SNHG1-217ENST00000541578 FLCNQ8NFG4 579 aa6.6□□□□□ -1.35
SNHG1-217ENST00000541578 MRRFQ96E11 262 aaKnown RBP6.6□□□□□ -1.35
SNHG1-217ENST00000541578 MISP3Q96FF7 219 aa6.6□□□□□ -1.35
SNHG1-217ENST00000541578 HEXIM2Q96MH2 286 aaKnown RBP6.6□□□□□ -1.35
SNHG1-217ENST00000541578 RSRP1Q9BUV0 290 aa6.6□□□□□ -1.35
SNHG1-217ENST00000541578 FOXQ1Q9C009 403 aa6.6□□□□□ -1.35
SNHG1-217ENST00000541578 FBRSQ9HAH7 460 aa6.6□□□□□ -1.35
SNHG1-217ENST00000541578 SLC5A6Q9Y289 635 aa6.6□□□□□ -1.35
SNHG1-217ENST00000541578 IGF2BP3O00425 579 aaKnown RBP eCLIP6.59□□□□□ -1.35
SNHG1-217ENST00000541578 GBP2P32456 591 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-217ENST00000541578 CAP2P40123 477 aa6.59□□□□□ -1.35
SNHG1-217ENST00000541578 OXCT1P55809 520 aa6.59□□□□□ -1.35
SNHG1-217ENST00000541578 RPL6Q02878 288 aaKnown RBP6.59□□□□□ -1.35
SNHG1-217ENST00000541578 LMNB2Q03252 620 aa6.59□□□□□ -1.35
SNHG1-217ENST00000541578 PWP1Q13610 501 aa6.59□□□□□ -1.35
SNHG1-217ENST00000541578 SLBPQ14493 270 aaKnown RBP eCLIP6.59□□□□□ -1.352e-8■□□□□ 9.6
SNHG1-217ENST00000541578 FAM214BQ7L5A3 538 aa6.59□□□□□ -1.35
SNHG1-217ENST00000541578 BCL7CQ8WUZ0 217 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-217ENST00000541578 TMEM74Q96NL1 305 aa6.59□□□□□ -1.35
SNHG1-217ENST00000541578 TMEM265A0A087WTH1 108 aa6.58□□□□□ -1.36
SNHG1-217ENST00000541578 F6X3S4 739 aa6.58□□□□□ -1.36
SNHG1-217ENST00000541578 CAMK2GQ13555 558 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-217ENST00000541578 NKG7Q16617 165 aa6.58□□□□□ -1.36
SNHG1-217ENST00000541578 IFI16Q16666 785 aaKnown RBP6.58□□□□□ -1.36
SNHG1-217ENST00000541578 NFXL1Q6ZNB6 911 aa6.58□□□□□ -1.36
SNHG1-217ENST00000541578 ABI1Q8IZP0 508 aa6.58□□□□□ -1.36
SNHG1-217ENST00000541578 MFSD2AQ8NA29 543 aa6.58□□□□□ -1.36
SNHG1-217ENST00000541578 AGBL5Q8NDL9 886 aa6.58□□□□□ -1.36
SNHG1-217ENST00000541578 VAV3Q9UKW4 847 aa6.58□□□□□ -1.36
SNHG1-217ENST00000541578 U3KQE9 123 aa6.58□□□□□ -1.36
SNHG1-217ENST00000541578 SHROOM4Q9ULL8 1493 aa6.58□□□□□ -1.36
SNHG1-217ENST00000541578 SLITRK5O94991 958 aa6.57□□□□□ -1.36
SNHG1-217ENST00000541578 BPNT1O95861 308 aa6.57□□□□□ -1.36
SNHG1-217ENST00000541578 EOMESO95936 686 aa6.57□□□□□ -1.36
SNHG1-217ENST00000541578 CST3P01034 146 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-217ENST00000541578 PF4P02776 101 aa6.57□□□□□ -1.36
SNHG1-217ENST00000541578 CEACAM5P06731 702 aa6.57□□□□□ -1.36
SNHG1-217ENST00000541578 ITIH2P19823 946 aa6.57□□□□□ -1.36
SNHG1-217ENST00000541578 PDE4BQ07343 736 aa6.57□□□□□ -1.36
SNHG1-217ENST00000541578 BNIP3Q12983 259 aa6.57□□□□□ -1.36
SNHG1-217ENST00000541578 MCTP1Q6DN14 999 aa6.57□□□□□ -1.36
SNHG1-217ENST00000541578 SPRED2Q7Z698 418 aa6.57□□□□□ -1.36
SNHG1-217ENST00000541578 PAK6Q9NQU5 681 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-217ENST00000541578 PRDM5Q9NQX1 630 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-217ENST00000541578 PLAGL2Q9UPG8 496 aa6.57□□□□□ -1.36
SNHG1-217ENST00000541578 COL17A1Q9UMD9 1497 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-217ENST00000541578 UNCXA6NJT0 531 aa6.56□□□□□ -1.36
SNHG1-217ENST00000541578 GNAT3A8MTJ3 354 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms