RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 CCDC171Q6TFL3 1326 aa18.53■□□□□ 0.56
DDB1-218ENST00000540784 RASSF10A6NK89 507 aa18.53■□□□□ 0.56
DDB1-218ENST00000540784 SLURP2P0DP57 97 aa18.53■□□□□ 0.56
DDB1-218ENST00000540784 ZNF157P51786 506 aaPredicted RBP18.53■□□□□ 0.56
DDB1-218ENST00000540784 C12orf60Q5U649 245 aa18.53■□□□□ 0.56
DDB1-218ENST00000540784 RGMBQ6NW40 437 aa18.53■□□□□ 0.56
DDB1-218ENST00000540784 CTR9Q6PD62 1173 aa18.53■□□□□ 0.56
DDB1-218ENST00000540784 PAXIP1Q6ZW49 1069 aaPredicted RBP18.53■□□□□ 0.56
DDB1-218ENST00000540784 ZNF589Q86UQ0 364 aaPredicted RBP18.53■□□□□ 0.56
DDB1-218ENST00000540784 METTL16Q86W50 562 aaKnown RBP18.53■□□□□ 0.56
DDB1-218ENST00000540784 SERPINB13Q9UIV8 391 aa18.53■□□□□ 0.56
DDB1-218ENST00000540784 CSADQ9Y600 493 aa18.53■□□□□ 0.56
DDB1-218ENST00000540784 FAM196BA6NMK8 535 aa18.52■□□□□ 0.56
DDB1-218ENST00000540784 PHF20L1A8MW92 1017 aa18.52■□□□□ 0.56
DDB1-218ENST00000540784 MINDY4BA8MYZ0 360 aa18.52■□□□□ 0.56
DDB1-218ENST00000540784 CYP2D6P10635 497 aa18.52■□□□□ 0.56
DDB1-218ENST00000540784 SBK1Q52WX2 424 aa18.52■□□□□ 0.56
DDB1-218ENST00000540784 VPS53Q5VIR6 699 aa18.52■□□□□ 0.56
DDB1-218ENST00000540784 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.52■□□□□ 0.56
DDB1-218ENST00000540784 CCDC102AQ96A19 550 aa18.52■□□□□ 0.56
DDB1-218ENST00000540784 NAPBQ9H115 298 aa18.52■□□□□ 0.56
DDB1-218ENST00000540784 EHD4Q9H223 541 aa18.52■□□□□ 0.56
DDB1-218ENST00000540784 ARPP21Q9UBL0 812 aaPredicted RBP18.52■□□□□ 0.56
DDB1-218ENST00000540784 AK9Q5TCS8 1911 aa18.51■□□□□ 0.55
DDB1-218ENST00000540784 CYP2D7A0A087X1C5 515 aa18.51■□□□□ 0.55
DDB1-218ENST00000540784 HSPD1P10809 573 aaKnown RBP18.51■□□□□ 0.55
DDB1-218ENST00000540784 ALX1Q15699 326 aa18.51■□□□□ 0.55
DDB1-218ENST00000540784 CASC1Q6TDU7 716 aa18.51■□□□□ 0.55
DDB1-218ENST00000540784 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.51■□□□□ 0.55
DDB1-218ENST00000540784 ZKSCAN4Q969J2 545 aaPredicted RBP18.51■□□□□ 0.55
DDB1-218ENST00000540784 EPB41L4AQ9HCS5 686 aaPredicted RBP18.51■□□□□ 0.55
DDB1-218ENST00000540784 CTNND1O60716 968 aaKnown RBP18.5■□□□□ 0.55
DDB1-218ENST00000540784 INPP5BP32019 993 aa18.5■□□□□ 0.55
DDB1-218ENST00000540784 ECE1P42892 770 aa18.5■□□□□ 0.55
DDB1-218ENST00000540784 CLMNQ96JQ2 1002 aa18.5■□□□□ 0.55
DDB1-218ENST00000540784 TAOK2Q9UL54 1235 aa18.5■□□□□ 0.55
DDB1-218ENST00000540784 PAPPA2Q9BXP8 1791 aa18.5■□□□□ 0.55
DDB1-218ENST00000540784 CDC45O75419 566 aa18.49■□□□□ 0.55
DDB1-218ENST00000540784 FGAP02671 866 aa18.49■□□□□ 0.55
DDB1-218ENST00000540784 GRM1Q13255 1194 aa18.49■□□□□ 0.55
DDB1-218ENST00000540784 VGLL4Q14135 290 aa18.49■□□□□ 0.55
DDB1-218ENST00000540784 CYP4F22Q6NT55 531 aa18.49■□□□□ 0.55
DDB1-218ENST00000540784 ELP3Q9H9T3 547 aa18.49■□□□□ 0.55
DDB1-218ENST00000540784 SWAP70Q9UH65 585 aa18.49■□□□□ 0.55
DDB1-218ENST00000540784 RAD50Q92878 1312 aa18.49■□□□□ 0.55
DDB1-218ENST00000540784 FOXP2O15409 715 aa18.48■□□□□ 0.55
DDB1-218ENST00000540784 SGSM2O43147 1006 aa18.48■□□□□ 0.55
DDB1-218ENST00000540784 VEGFBP49765 207 aa18.48■□□□□ 0.55
DDB1-218ENST00000540784 EVX2Q03828 476 aa18.48■□□□□ 0.55
DDB1-218ENST00000540784 GABPAQ06546 454 aa18.48■□□□□ 0.55
DDB1-218ENST00000540784 TATDN1Q6P1N9 297 aa18.48■□□□□ 0.55
DDB1-218ENST00000540784 KIAA1211Q6ZU35 1233 aa18.48■□□□□ 0.55
DDB1-218ENST00000540784 DNAJC5GQ8N7S2 189 aa18.48■□□□□ 0.55
DDB1-218ENST00000540784 DYNLL2Q96FJ2 89 aa18.48■□□□□ 0.55
DDB1-218ENST00000540784 CAPNS2Q96L46 248 aa18.48■□□□□ 0.55
DDB1-218ENST00000540784 PICK1Q9NRD5 415 aa18.48■□□□□ 0.55
DDB1-218ENST00000540784 SLC3A2P08195 630 aaKnown RBP18.47■□□□□ 0.55
DDB1-218ENST00000540784 CAP2P40123 477 aa18.47■□□□□ 0.55
DDB1-218ENST00000540784 CERKLQ49MI3 558 aaPredicted RBP18.47■□□□□ 0.55
DDB1-218ENST00000540784 NOL9Q5SY16 702 aaKnown RBP18.47■□□□□ 0.55
DDB1-218ENST00000540784 SCYL3Q8IZE3 742 aa18.47■□□□□ 0.55
DDB1-218ENST00000540784 ESYT1Q9BSJ8 1104 aa18.47■□□□□ 0.55
DDB1-218ENST00000540784 DSCC1Q9BVC3 393 aa18.47■□□□□ 0.55
DDB1-218ENST00000540784 IL25Q9H293 177 aa18.47■□□□□ 0.55
DDB1-218ENST00000540784 DNAJC18Q9H819 358 aa18.47■□□□□ 0.55
DDB1-218ENST00000540784 CTNNA3Q9UI47 895 aa18.47■□□□□ 0.55
DDB1-218ENST00000540784 WDR33Q9C0J8 1336 aaKnown RBP18.47■□□□□ 0.55
DDB1-218ENST00000540784 FOCADQ5VW36 1801 aa18.46■□□□□ 0.55
DDB1-218ENST00000540784 CDK5RAP2Q96SN8 1893 aa18.46■□□□□ 0.55
DDB1-218ENST00000540784 SMIM22K7EJ46 135 aa18.46■□□□□ 0.55
DDB1-218ENST00000540784 SHMT1P34896 483 aa18.46■□□□□ 0.55
DDB1-218ENST00000540784 CDK8P49336 464 aa18.46■□□□□ 0.55
DDB1-218ENST00000540784 PPARAQ07869 468 aa18.46■□□□□ 0.55
DDB1-218ENST00000540784 RRP1BQ14684 758 aaKnown RBP18.46■□□□□ 0.55
DDB1-218ENST00000540784 ERO1BQ86YB8 467 aa18.46■□□□□ 0.55
DDB1-218ENST00000540784 RASAL3Q86YV0 1011 aa18.46■□□□□ 0.55
DDB1-218ENST00000540784 STK11IPQ8N1F8 1099 aa18.46■□□□□ 0.55
DDB1-218ENST00000540784 MKNK2Q9HBH9 465 aa18.46■□□□□ 0.55
DDB1-218ENST00000540784 ZNF287Q9HBT7 754 aa18.46■□□□□ 0.55
DDB1-218ENST00000540784 SNCAIPQ9Y6H5 919 aa18.46■□□□□ 0.55
DDB1-218ENST00000540784 MYH1P12882 1939 aa18.45■□□□□ 0.54
DDB1-218ENST00000540784 FAM155AB1AL88 458 aaPredicted RBP18.45■□□□□ 0.54
DDB1-218ENST00000540784 SLC10A3P09131 477 aa18.45■□□□□ 0.54
DDB1-218ENST00000540784 SPRYD7Q5W111 196 aa18.45■□□□□ 0.54
DDB1-218ENST00000540784 C16orf86Q6ZW13 317 aa18.45■□□□□ 0.54
DDB1-218ENST00000540784 SLC44A5Q8NCS7 719 aa18.45■□□□□ 0.54
DDB1-218ENST00000540784 OPTNQ96CV9 577 aa18.45■□□□□ 0.54
DDB1-218ENST00000540784 WNK4Q96J92 1243 aa18.45■□□□□ 0.54
DDB1-218ENST00000540784 GINM1Q9NU53 330 aa18.45■□□□□ 0.54
DDB1-218ENST00000540784 SPDYE5A6NIY4 337 aa18.44■□□□□ 0.54
DDB1-218ENST00000540784 ZNF213O14771 459 aa18.44■□□□□ 0.54
DDB1-218ENST00000540784 PPATQ06203 517 aa18.44■□□□□ 0.54
DDB1-218ENST00000540784 PDE4BQ07343 736 aa18.44■□□□□ 0.54
DDB1-218ENST00000540784 MKRN3Q13064 507 aaKnown RBP18.44■□□□□ 0.54
DDB1-218ENST00000540784 NOGQ13253 232 aa18.44■□□□□ 0.54
DDB1-218ENST00000540784 ABCB5Q2M3G0 1257 aa18.44■□□□□ 0.54
DDB1-218ENST00000540784 CABP5Q9NP86 173 aa18.44■□□□□ 0.54
DDB1-218ENST00000540784 ANAPC4Q9UJX5 808 aa18.44■□□□□ 0.54
DDB1-218ENST00000540784 GDF11O95390 407 aa18.43■□□□□ 0.54
DDB1-218ENST00000540784 ASNSP08243 561 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms