RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 FAM196BA6NMK8 535 aa16.15■□□□□ 0.18
PRPF19-204ENST00000539960 CTNND1O60716 968 aaKnown RBP16.15■□□□□ 0.18
PRPF19-204ENST00000539960 HSPA1AP0DMV8 641 aaKnown RBP16.15■□□□□ 0.18
PRPF19-204ENST00000539960 HSPA1BP0DMV9 641 aaKnown RBP16.15■□□□□ 0.18
PRPF19-204ENST00000539960 TM4SF4P48230 202 aa16.15■□□□□ 0.18
PRPF19-204ENST00000539960 ZMYM1Q5SVZ6 1142 aa16.15■□□□□ 0.18
PRPF19-204ENST00000539960 NOL9Q5SY16 702 aaKnown RBP16.15■□□□□ 0.18
PRPF19-204ENST00000539960 CRACR2BQ8N4Y2 399 aaPredicted RBP16.15■□□□□ 0.18
PRPF19-204ENST00000539960 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
PRPF19-204ENST00000539960 RILPL2Q969X0 211 aa16.15■□□□□ 0.18
PRPF19-204ENST00000539960 CCDC136Q96JN2 1154 aa16.15■□□□□ 0.18
PRPF19-204ENST00000539960 SLC4A4Q9Y6R1 1079 aa16.15■□□□□ 0.18
PRPF19-204ENST00000539960 AK9Q5TCS8 1911 aa16.14■□□□□ 0.17
PRPF19-204ENST00000539960 M0R2C6 588 aa16.14■□□□□ 0.17
PRPF19-204ENST00000539960 POLR3DP05423 398 aaPredicted RBP16.14■□□□□ 0.17
PRPF19-204ENST00000539960 PLCD1P51178 756 aa16.14■□□□□ 0.17
PRPF19-204ENST00000539960 INHBEP58166 350 aa16.14■□□□□ 0.17
PRPF19-204ENST00000539960 SLC4A8Q2Y0W8 1093 aa16.14■□□□□ 0.17
PRPF19-204ENST00000539960 SEC62Q99442 399 aaKnown RBP16.14■□□□□ 0.17
PRPF19-204ENST00000539960 BEGAINQ9BUH8 593 aa16.14■□□□□ 0.17
PRPF19-204ENST00000539960 MCM9Q9NXL9 1143 aa16.14■□□□□ 0.17
PRPF19-204ENST00000539960 MANSC4A6NHS7 340 aaPredicted RBP16.13■□□□□ 0.17
PRPF19-204ENST00000539960 GPAA1O43292 621 aa16.13■□□□□ 0.17
PRPF19-204ENST00000539960 PPATQ06203 517 aa16.13■□□□□ 0.17
PRPF19-204ENST00000539960 RRP1BQ14684 758 aaKnown RBP16.13■□□□□ 0.17
PRPF19-204ENST00000539960 SCYL3Q8IZE3 742 aa16.13■□□□□ 0.17
PRPF19-204ENST00000539960 OTUD5Q96G74 571 aa16.13■□□□□ 0.17
PRPF19-204ENST00000539960 DDRGK1Q96HY6 314 aa16.13■□□□□ 0.17
PRPF19-204ENST00000539960 TRIM34Q9BYJ4 488 aa16.13■□□□□ 0.17
PRPF19-204ENST00000539960 EHD4Q9H223 541 aa16.13■□□□□ 0.17
PRPF19-204ENST00000539960 SERPINB13Q9UIV8 391 aa16.13■□□□□ 0.17
PRPF19-204ENST00000539960 GSG1L2A8MUP6 293 aa16.12■□□□□ 0.17
PRPF19-204ENST00000539960 PATL2C9JE40 543 aaKnown RBP16.12■□□□□ 0.17
PRPF19-204ENST00000539960 GNAT2P19087 354 aa16.12■□□□□ 0.17
PRPF19-204ENST00000539960 CAP2P40123 477 aa16.12■□□□□ 0.17
PRPF19-204ENST00000539960 SREBF2Q12772 1141 aa16.12■□□□□ 0.17
PRPF19-204ENST00000539960 PPIL2Q13356 520 aa16.12■□□□□ 0.17
PRPF19-204ENST00000539960 ERICH6BQ5W0A0 696 aa16.12■□□□□ 0.17
PRPF19-204ENST00000539960 GIMAP6Q6P9H5 292 aa16.12■□□□□ 0.17
PRPF19-204ENST00000539960 MS4A4AQ96JQ5 239 aa16.12■□□□□ 0.17
PRPF19-204ENST00000539960 DNAJC18Q9H819 358 aa16.12■□□□□ 0.17
PRPF19-204ENST00000539960 PICK1Q9NRD5 415 aa16.12■□□□□ 0.17
PRPF19-204ENST00000539960 HELLSQ9NRZ9 838 aa16.12■□□□□ 0.17
PRPF19-204ENST00000539960 PCNTO95613 3336 aa16.12■□□□□ 0.17
PRPF19-204ENST00000539960 TESPA1A2RU30 521 aaPredicted RBP16.11■□□□□ 0.17
PRPF19-204ENST00000539960 USP17L12C9JPN9 530 aa16.11■□□□□ 0.17
PRPF19-204ENST00000539960 USP17L21D6R901 530 aa16.11■□□□□ 0.17
PRPF19-204ENST00000539960 IRF6O14896 467 aa16.11■□□□□ 0.17
PRPF19-204ENST00000539960 FOXN1O15353 648 aa16.11■□□□□ 0.17
PRPF19-204ENST00000539960 CA12O43570 354 aa16.11■□□□□ 0.17
PRPF19-204ENST00000539960 PTPRAP18433 802 aa16.11■□□□□ 0.17
PRPF19-204ENST00000539960 SDSP20132 328 aa16.11■□□□□ 0.17
PRPF19-204ENST00000539960 GTF2A2P52657 109 aa16.11■□□□□ 0.17
PRPF19-204ENST00000539960 TTC22Q5TAA0 569 aa16.11■□□□□ 0.17
PRPF19-204ENST00000539960 C12orf60Q5U649 245 aa16.11■□□□□ 0.17
PRPF19-204ENST00000539960 RNF186Q9NXI6 227 aa16.11■□□□□ 0.17
PRPF19-204ENST00000539960 ZHX2Q9Y6X8 837 aa16.11■□□□□ 0.17
PRPF19-204ENST00000539960 APPP05067 770 aa16.1■□□□□ 0.17
PRPF19-204ENST00000539960 CYP2D6P10635 497 aa16.1■□□□□ 0.17
PRPF19-204ENST00000539960 GABPAQ06546 454 aa16.1■□□□□ 0.17
PRPF19-204ENST00000539960 MCMDC2Q4G0Z9 681 aa16.1■□□□□ 0.17
PRPF19-204ENST00000539960 TATDN1Q6P1N9 297 aa16.1■□□□□ 0.17
PRPF19-204ENST00000539960 CTR9Q6PD62 1173 aa16.1■□□□□ 0.17
PRPF19-204ENST00000539960 FAM227BQ96M60 508 aa16.1■□□□□ 0.17
PRPF19-204ENST00000539960 TAOK2Q9UL54 1235 aa16.1■□□□□ 0.17
PRPF19-204ENST00000539960 CXCL11O14625 94 aa16.09■□□□□ 0.17
PRPF19-204ENST00000539960 TRPA1O75762 1119 aa16.09■□□□□ 0.17
PRPF19-204ENST00000539960 GSPT1P15170 499 aaKnown RBP16.09■□□□□ 0.17
PRPF19-204ENST00000539960 EVX2Q03828 476 aa16.09■□□□□ 0.17
PRPF19-204ENST00000539960 SNAPC2Q13487 334 aa16.09■□□□□ 0.17
PRPF19-204ENST00000539960 SBK1Q52WX2 424 aa16.09■□□□□ 0.17
PRPF19-204ENST00000539960 IFNL1Q8IU54 200 aa16.09■□□□□ 0.17
PRPF19-204ENST00000539960 AMOTL1Q8IY63 956 aa16.09■□□□□ 0.17
PRPF19-204ENST00000539960 PTPN18Q99952 460 aa16.09■□□□□ 0.17
PRPF19-204ENST00000539960 GINM1Q9NU53 330 aa16.09■□□□□ 0.17
PRPF19-204ENST00000539960 KCNH4Q9UQ05 1017 aa16.09■□□□□ 0.17
PRPF19-204ENST00000539960 AFG3L2Q9Y4W6 797 aa16.09■□□□□ 0.17
PRPF19-204ENST00000539960 THSD7BQ9C0I4 1608 aa16.08■□□□□ 0.17
PRPF19-204ENST00000539960 CDK5RAP2Q96SN8 1893 aa16.08■□□□□ 0.17
PRPF19-204ENST00000539960 CYP2D7A0A087X1C5 515 aa16.08■□□□□ 0.16
PRPF19-204ENST00000539960 A0A0D9SFI3 127 aa16.08■□□□□ 0.16
PRPF19-204ENST00000539960 HIP1O00291 1037 aa16.08■□□□□ 0.16
PRPF19-204ENST00000539960 ASNSP08243 561 aa16.08■□□□□ 0.16
PRPF19-204ENST00000539960 CETPP11597 493 aa16.08■□□□□ 0.16
PRPF19-204ENST00000539960 SHMT1P34896 483 aa16.08■□□□□ 0.16
PRPF19-204ENST00000539960 CTCFP49711 727 aaPredicted RBP16.08■□□□□ 0.16
PRPF19-204ENST00000539960 JAG1P78504 1218 aa16.08■□□□□ 0.16
PRPF19-204ENST00000539960 NMIQ13287 307 aaPredicted RBP16.08■□□□□ 0.16
PRPF19-204ENST00000539960 CERKLQ49MI3 558 aaPredicted RBP16.08■□□□□ 0.16
PRPF19-204ENST00000539960 CCDC129Q6ZRS4 1044 aa16.08■□□□□ 0.16
PRPF19-204ENST00000539960 IFNL3Q8IZI9 196 aa16.08■□□□□ 0.16
PRPF19-204ENST00000539960 BRI3BPQ8WY22 251 aa16.08■□□□□ 0.16
PRPF19-204ENST00000539960 DYNLL2Q96FJ2 89 aa16.08■□□□□ 0.16
PRPF19-204ENST00000539960 NACAP1Q9BZK3 213 aa16.08■□□□□ 0.16
PRPF19-204ENST00000539960 SAGE1Q9NXZ1 904 aa16.08■□□□□ 0.16
PRPF19-204ENST00000539960 PPP4R2Q9NY27 417 aa16.08■□□□□ 0.16
PRPF19-204ENST00000539960 FOCADQ5VW36 1801 aa16.08■□□□□ 0.16
PRPF19-204ENST00000539960 MYH7P12883 1935 aa16.07■□□□□ 0.16
PRPF19-204ENST00000539960 CCL15-CCL14A0A0B4J2E2 113 aa16.07■□□□□ 0.16
PRPF19-204ENST00000539960 USP17L5A8MUK1 530 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms