RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 FLT1P17948 1338 aa26.06■■□□□ 1.76
CCDC78-215ENST00000538176 A0A0G2JLL6 359 aaPredicted RBP26.05■■□□□ 1.76
CCDC78-215ENST00000538176 PDHXO00330 501 aa26.05■■□□□ 1.76
CCDC78-215ENST00000538176 GNRH1P01148 92 aa26.05■■□□□ 1.76
CCDC78-215ENST00000538176 CAP2P40123 477 aa26.05■■□□□ 1.76
CCDC78-215ENST00000538176 PRRT2Q7Z6L0 340 aaPredicted RBP26.05■■□□□ 1.76
CCDC78-215ENST00000538176 MAPKAPK5Q8IW41 473 aa26.05■■□□□ 1.76
CCDC78-215ENST00000538176 DCTPP1Q9H773 170 aa26.05■■□□□ 1.76
CCDC78-215ENST00000538176 SLC45A1Q9Y2W3 748 aa26.05■■□□□ 1.76
CCDC78-215ENST00000538176 MYO5AQ9Y4I1 1855 aaKnown RBP26.04■■□□□ 1.76
CCDC78-215ENST00000538176 USP5P45974 858 aa26.04■■□□□ 1.76
CCDC78-215ENST00000538176 SLC9C2Q5TAH2 1124 aa26.04■■□□□ 1.76
CCDC78-215ENST00000538176 CD99L2Q8TCZ2 262 aa26.04■■□□□ 1.76
CCDC78-215ENST00000538176 NDUFB9Q9Y6M9 179 aa26.04■■□□□ 1.76
CCDC78-215ENST00000538176 CRACR2BQ8N4Y2 399 aaPredicted RBP26.03■■□□□ 1.76
CCDC78-215ENST00000538176 PARK7Q99497 189 aaKnown RBP26.03■■□□□ 1.76
CCDC78-215ENST00000538176 AS3MTQ9HBK9 375 aa26.03■■□□□ 1.76
CCDC78-215ENST00000538176 GOLIM4O00461 696 aa26.02■■□□□ 1.76
CCDC78-215ENST00000538176 DYNLL1P63167 89 aaKnown RBP26.02■■□□□ 1.76
CCDC78-215ENST00000538176 MOGSQ13724 837 aa26.02■■□□□ 1.76
CCDC78-215ENST00000538176 TTC6Q86TZ1 520 aa26.02■■□□□ 1.76
CCDC78-215ENST00000538176 MIGA1Q8NAN2 632 aa26.02■■□□□ 1.76
CCDC78-215ENST00000538176 DNAJC2Q99543 621 aaKnown RBP26.02■■□□□ 1.76
CCDC78-215ENST00000538176 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.02■■□□□ 1.766e-8■■■■■ 46.2
CCDC78-215ENST00000538176 PTPN22Q9Y2R2 807 aa26.02■■□□□ 1.76
CCDC78-215ENST00000538176 USP17L5A8MUK1 530 aa26.01■■□□□ 1.75
CCDC78-215ENST00000538176 ASNSP08243 561 aa26.01■■□□□ 1.75
CCDC78-215ENST00000538176 RRP1P56182 461 aaKnown RBP26.01■■□□□ 1.75
CCDC78-215ENST00000538176 DOCK1Q14185 1865 aa26.01■■□□□ 1.75
CCDC78-215ENST00000538176 C17orf99Q6UX52 265 aa26.01■■□□□ 1.75
CCDC78-215ENST00000538176 HAUS7Q99871 368 aa26.01■■□□□ 1.75
CCDC78-215ENST00000538176 PAG1Q9NWQ8 432 aa26.01■■□□□ 1.75
CCDC78-215ENST00000538176 PALD1Q9ULE6 856 aa26.01■■□□□ 1.75
CCDC78-215ENST00000538176 MAGEB6P1A0A0J9YX57 407 aa26■■□□□ 1.75
CCDC78-215ENST00000538176 MLLT1Q03111 559 aaPredicted RBP26■■□□□ 1.75
CCDC78-215ENST00000538176 ZNF280CQ8ND82 737 aa26■■□□□ 1.75
CCDC78-215ENST00000538176 BCL11AQ9H165 835 aa26■■□□□ 1.75
CCDC78-215ENST00000538176 BOLA2Q9H3K6 86 aa26■■□□□ 1.75
CCDC78-215ENST00000538176 FOCADQ5VW36 1801 aa26■■□□□ 1.75
CCDC78-215ENST00000538176 FAM196BA6NMK8 535 aa25.99■■□□□ 1.75
CCDC78-215ENST00000538176 SLURP2P0DP57 97 aa25.99■■□□□ 1.75
CCDC78-215ENST00000538176 PDE6AP16499 860 aa25.99■■□□□ 1.75
CCDC78-215ENST00000538176 PRMT2P55345 433 aa25.99■■□□□ 1.75
CCDC78-215ENST00000538176 LACTBP83111 547 aaPredicted RBP25.99■■□□□ 1.75
CCDC78-215ENST00000538176 GPAT2Q6NUI2 795 aa25.99■■□□□ 1.75
CCDC78-215ENST00000538176 PROCA1Q8NCQ7 364 aaPredicted RBP25.99■■□□□ 1.75
CCDC78-215ENST00000538176 GPATCH3Q96I76 525 aa25.99■■□□□ 1.75
CCDC78-215ENST00000538176 RIOK1Q9BRS2 568 aaKnown RBP25.99■■□□□ 1.75
CCDC78-215ENST00000538176 TRIM75PA6NK02 468 aa25.98■■□□□ 1.75
CCDC78-215ENST00000538176 ZSCAN25Q6NSZ9 544 aa25.98■■□□□ 1.75
CCDC78-215ENST00000538176 CRNKL1Q9BZJ0 848 aaKnown RBP25.98■■□□□ 1.75
CCDC78-215ENST00000538176 EHD4Q9H223 541 aa25.98■■□□□ 1.75
CCDC78-215ENST00000538176 TAOK2Q9UL54 1235 aa25.98■■□□□ 1.75
CCDC78-215ENST00000538176 ZNF532Q9HCE3 1301 aa25.97■■□□□ 1.75
CCDC78-215ENST00000538176 HOXD10P28358 340 aa25.97■■□□□ 1.75
CCDC78-215ENST00000538176 SPP2Q13103 211 aa25.97■■□□□ 1.75
CCDC78-215ENST00000538176 PABPC4Q13310 644 aaKnown RBP eCLIP25.97■■□□□ 1.75
CCDC78-215ENST00000538176 AAMPQ13685 434 aa25.97■■□□□ 1.75
CCDC78-215ENST00000538176 GADL1Q6ZQY3 521 aa25.97■■□□□ 1.75
CCDC78-215ENST00000538176 WDR18Q9BV38 432 aa25.97■■□□□ 1.75
CCDC78-215ENST00000538176 ECHDC1Q9NTX5 307 aa25.97■■□□□ 1.75
CCDC78-215ENST00000538176 SERPINB13Q9UIV8 391 aa25.97■■□□□ 1.75
CCDC78-215ENST00000538176 PNMA3Q9UL41 463 aa25.97■■□□□ 1.75
CCDC78-215ENST00000538176 AGTPBP1Q9UPW5 1226 aa25.97■■□□□ 1.75
CCDC78-215ENST00000538176 CDK5RAP2Q96SN8 1893 aa25.97■■□□□ 1.75
CCDC78-215ENST00000538176 SAP30BPQ9UHR5 308 aaKnown RBP25.96■■□□□ 1.75
CCDC78-215ENST00000538176 SH3D19Q5HYK7 790 aa25.95■■□□□ 1.74
CCDC78-215ENST00000538176 NBPF11Q86T75 865 aa25.95■■□□□ 1.74
CCDC78-215ENST00000538176 ADGRA2Q96PE1 1338 aa25.94■■□□□ 1.74
CCDC78-215ENST00000538176 TCRBV5S4A2TA0A5A2 114 aa25.94■■□□□ 1.74
CCDC78-215ENST00000538176 C19orf81C9J6K1 198 aa25.94■■□□□ 1.74
CCDC78-215ENST00000538176 UBE3CQ15386 1083 aa25.94■■□□□ 1.74
CCDC78-215ENST00000538176 TATDN1Q6P1N9 297 aa25.94■■□□□ 1.74
CCDC78-215ENST00000538176 YTHDC1Q96MU7 727 aaKnown RBP25.94■■□□□ 1.74
CCDC78-215ENST00000538176 CPA4Q9UI42 421 aa25.94■■□□□ 1.74
CCDC78-215ENST00000538176 PHIPQ8WWQ0 1821 aa25.93■■□□□ 1.74
CCDC78-215ENST00000538176 SMARCA5O60264 1052 aaPredicted RBP25.93■■□□□ 1.74
CCDC78-215ENST00000538176 ADD2P35612 726 aa25.93■■□□□ 1.74
CCDC78-215ENST00000538176 RRP1BQ14684 758 aaKnown RBP25.93■■□□□ 1.74
CCDC78-215ENST00000538176 DNAJC18Q9H819 358 aa25.93■■□□□ 1.74
CCDC78-215ENST00000538176 MYH1P12882 1939 aa25.92■■□□□ 1.74
CCDC78-215ENST00000538176 POLR3DP05423 398 aaPredicted RBP25.92■■□□□ 1.74
CCDC78-215ENST00000538176 CYP2C8P10632 490 aa25.92■■□□□ 1.74
CCDC78-215ENST00000538176 BCRP11274 1271 aa25.92■■□□□ 1.74
CCDC78-215ENST00000538176 SMCR8Q8TEV9 937 aaPredicted RBP25.92■■□□□ 1.74
CCDC78-215ENST00000538176 PCDHB15Q9Y5E8 787 aa25.92■■□□□ 1.74
CCDC78-215ENST00000538176 PTPRFP10586 1907 aa25.91■■□□□ 1.74
CCDC78-215ENST00000538176 BACE1P56817 501 aa25.91■■□□□ 1.74
CCDC78-215ENST00000538176 ARMC5Q96C12 935 aa25.91■■□□□ 1.74
CCDC78-215ENST00000538176 ATP8A2Q9NTI2 1148 aa25.91■■□□□ 1.74
CCDC78-215ENST00000538176 USP17L10C9JJH3 530 aa25.9■■□□□ 1.74
CCDC78-215ENST00000538176 OSBPP22059 807 aa25.9■■□□□ 1.74
CCDC78-215ENST00000538176 PSMC4P43686 418 aa25.9■■□□□ 1.74
CCDC78-215ENST00000538176 SOX10P56693 466 aa25.9■■□□□ 1.74
CCDC78-215ENST00000538176 CCDC84Q86UT8 332 aaPredicted RBP25.9■■□□□ 1.74
CCDC78-215ENST00000538176 EDC3Q96F86 508 aaKnown RBP25.9■■□□□ 1.74
CCDC78-215ENST00000538176 DDRGK1Q96HY6 314 aa25.9■■□□□ 1.74
CCDC78-215ENST00000538176 MCM9Q9NXL9 1143 aa25.9■■□□□ 1.74
CCDC78-215ENST00000538176 TMOD4Q9NZQ9 345 aa25.9■■□□□ 1.74
CCDC78-215ENST00000538176 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms