RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-215	ENST00000537296	TBC1D8	O95759	1140 aa		13.17	□□□□□ -0.3
LDHA-215	ENST00000537296	BAG3	O95817	575 aa		13.17	□□□□□ -0.3
LDHA-215	ENST00000537296	TTF1	Q15361	905 aa	Predicted RBP	13.17	□□□□□ -0.3
LDHA-215	ENST00000537296	MS4A4A	Q96JQ5	239 aa		13.17	□□□□□ -0.3
LDHA-215	ENST00000537296	ECHDC1	Q9NTX5	307 aa		13.17	□□□□□ -0.3
LDHA-215	ENST00000537296	SAGE1	Q9NXZ1	904 aa		13.17	□□□□□ -0.3
LDHA-215	ENST00000537296	NAV1	Q8NEY1	1877 aa		13.16	□□□□□ -0.3
LDHA-215	ENST00000537296	COL2A1	P02458	1487 aa	Predicted RBP	13.16	□□□□□ -0.3
LDHA-215	ENST00000537296	IGHD	P01880	384 aa		13.16	□□□□□ -0.3
LDHA-215	ENST00000537296	MAP3K10	Q02779	954 aa		13.16	□□□□□ -0.3
LDHA-215	ENST00000537296	SREBF2	Q12772	1141 aa		13.16	□□□□□ -0.3
LDHA-215	ENST00000537296	HDAC1	Q13547	482 aa	Predicted RBP	13.16	□□□□□ -0.3
LDHA-215	ENST00000537296	RRP1B	Q14684	758 aa	Known RBP	13.16	□□□□□ -0.3
LDHA-215	ENST00000537296	IFNL1	Q8IU54	200 aa		13.16	□□□□□ -0.3
LDHA-215	ENST00000537296	RIOK1	Q9BRS2	568 aa	Known RBP	13.16	□□□□□ -0.3
LDHA-215	ENST00000537296	SAP30BP	Q9UHR5	308 aa	Known RBP	13.16	□□□□□ -0.3
LDHA-215	ENST00000537296	PALD1	Q9ULE6	856 aa		13.16	□□□□□ -0.3
LDHA-215	ENST00000537296	MANSC4	A6NHS7	340 aa	Predicted RBP	13.15	□□□□□ -0.3
LDHA-215	ENST00000537296	IRF6	O14896	467 aa		13.15	□□□□□ -0.3
LDHA-215	ENST00000537296	MAP4K4	O95819	1239 aa	Predicted RBP	13.15	□□□□□ -0.3
LDHA-215	ENST00000537296	CCDC84	Q86UT8	332 aa	Predicted RBP	13.15	□□□□□ -0.3
LDHA-215	ENST00000537296	BRI3BP	Q8WY22	251 aa		13.15	□□□□□ -0.3
LDHA-215	ENST00000537296	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.15	□□□□□ -0.3
LDHA-215	ENST00000537296	PTPRF	P10586	1907 aa		13.15	□□□□□ -0.3
LDHA-215	ENST00000537296	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.15	□□□□□ -0.3
LDHA-215	ENST00000537296	IGSF3	O75054	1194 aa		13.14	□□□□□ -0.31
LDHA-215	ENST00000537296	PLCG2	P16885	1265 aa		13.14	□□□□□ -0.31
LDHA-215	ENST00000537296	ADD2	P35612	726 aa		13.14	□□□□□ -0.31
LDHA-215	ENST00000537296	EVX2	Q03828	476 aa		13.14	□□□□□ -0.31
LDHA-215	ENST00000537296	ANKRD45	Q5TZF3	282 aa		13.14	□□□□□ -0.31
LDHA-215	ENST00000537296	ERO1B	Q86YB8	467 aa		13.14	□□□□□ -0.31
LDHA-215	ENST00000537296	TNS4	Q8IZW8	715 aa		13.14	□□□□□ -0.31
LDHA-215	ENST00000537296	LCORL	Q8N3X6	602 aa		13.14	□□□□□ -0.31
LDHA-215	ENST00000537296	DNAJC18	Q9H819	358 aa		13.14	□□□□□ -0.31
LDHA-215	ENST00000537296	SALL3	Q9BXA9	1300 aa		13.14	□□□□□ -0.31
LDHA-215	ENST00000537296	MAGEB6P1	A0A0J9YX57	407 aa		13.13	□□□□□ -0.31
LDHA-215	ENST00000537296	TESPA1	A2RU30	521 aa	Predicted RBP	13.13	□□□□□ -0.31
LDHA-215	ENST00000537296	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.13	□□□□□ -0.31
LDHA-215	ENST00000537296	NOL9	Q5SY16	702 aa	Known RBP	13.13	□□□□□ -0.31
LDHA-215	ENST00000537296	SCYL3	Q8IZE3	742 aa		13.13	□□□□□ -0.31
LDHA-215	ENST00000537296	PI4K2B	Q8TCG2	481 aa		13.13	□□□□□ -0.31
LDHA-215	ENST00000537296	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.13	□□□□□ -0.31	8e-8	■□□□□ 11.2
LDHA-215	ENST00000537296	CCL15-CCL14	A0A0B4J2E2	113 aa		13.13	□□□□□ -0.31
LDHA-215	ENST00000537296	TBC1D12	O60347	775 aa		13.13	□□□□□ -0.31
LDHA-215	ENST00000537296	USP5	P45974	858 aa		13.13	□□□□□ -0.31
LDHA-215	ENST00000537296	JAG1	P78504	1218 aa		13.13	□□□□□ -0.31
LDHA-215	ENST00000537296	PPIL2	Q13356	520 aa		13.13	□□□□□ -0.31
LDHA-215	ENST00000537296	CCL15	Q16663	113 aa		13.13	□□□□□ -0.31
LDHA-215	ENST00000537296	FAM43A	Q8N2R8	423 aa		13.13	□□□□□ -0.31
LDHA-215	ENST00000537296	ARMT1	Q9H993	441 aa		13.13	□□□□□ -0.31
LDHA-215	ENST00000537296	PRKAB2	O43741	272 aa		13.12	□□□□□ -0.31
LDHA-215	ENST00000537296	PTPRA	P18433	802 aa		13.12	□□□□□ -0.31
LDHA-215	ENST00000537296	MX1	P20591	662 aa		13.12	□□□□□ -0.31
LDHA-215	ENST00000537296	GTF2A2	P52657	109 aa		13.12	□□□□□ -0.31
LDHA-215	ENST00000537296	INHBE	P58166	350 aa		13.12	□□□□□ -0.31
LDHA-215	ENST00000537296	PPAT	Q06203	517 aa		13.12	□□□□□ -0.31
LDHA-215	ENST00000537296	B4GALNT3	Q6L9W6	998 aa		13.12	□□□□□ -0.31
LDHA-215	ENST00000537296	SDR42E1	Q8WUS8	393 aa		13.12	□□□□□ -0.31
LDHA-215	ENST00000537296	GCC1	Q96CN9	775 aa		13.12	□□□□□ -0.31
LDHA-215	ENST00000537296	PI4KB	Q9UBF8	816 aa		13.12	□□□□□ -0.31
LDHA-215	ENST00000537296	MBD4	O95243	580 aa		13.11	□□□□□ -0.31
LDHA-215	ENST00000537296	CRHR2	Q13324	411 aa		13.11	□□□□□ -0.31
LDHA-215	ENST00000537296	MOGS	Q13724	837 aa		13.11	□□□□□ -0.31
LDHA-215	ENST00000537296	GSE1	Q14687	1217 aa		13.11	□□□□□ -0.31
LDHA-215	ENST00000537296	SMC5	Q8IY18	1101 aa		13.11	□□□□□ -0.31
LDHA-215	ENST00000537296	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.11	□□□□□ -0.31
LDHA-215	ENST00000537296	GPATCH3	Q96I76	525 aa		13.11	□□□□□ -0.31
LDHA-215	ENST00000537296	LNPK	Q9C0E8	428 aa		13.11	□□□□□ -0.31
LDHA-215	ENST00000537296	PUS7L	Q9H0K6	701 aa	Known RBP	13.11	□□□□□ -0.31
LDHA-215	ENST00000537296	DHX36	Q9H2U1	1008 aa	Known RBP	13.11	□□□□□ -0.31
LDHA-215	ENST00000537296	ZHX2	Q9Y6X8	837 aa		13.11	□□□□□ -0.31
LDHA-215	ENST00000537296	TTC41P	Q6P2S7	1318 aa		13.11	□□□□□ -0.31
LDHA-215	ENST00000537296	HTT	P42858	3142 aa		13.1	□□□□□ -0.31
LDHA-215	ENST00000537296	ZSWIM8	A7E2V4	1837 aa		13.1	□□□□□ -0.31
LDHA-215	ENST00000537296	BTBD19	C9JJ37	291 aa		13.1	□□□□□ -0.31
LDHA-215	ENST00000537296	SMIM22	K7EJ46	135 aa		13.1	□□□□□ -0.31
LDHA-215	ENST00000537296	GPR25	O00155	361 aa		13.1	□□□□□ -0.31
LDHA-215	ENST00000537296	CTNND1	O60716	968 aa	Known RBP	13.1	□□□□□ -0.31
LDHA-215	ENST00000537296	PLCD1	P51178	756 aa		13.1	□□□□□ -0.31
LDHA-215	ENST00000537296	SNAPC2	Q13487	334 aa		13.1	□□□□□ -0.31
LDHA-215	ENST00000537296	AAMP	Q13685	434 aa		13.1	□□□□□ -0.31
LDHA-215	ENST00000537296	TMED8	Q6PL24	325 aa	Predicted RBP	13.1	□□□□□ -0.31
LDHA-215	ENST00000537296	RASEF	Q8IZ41	740 aa		13.1	□□□□□ -0.31
LDHA-215	ENST00000537296	KBTBD3	Q8NAB2	608 aa		13.1	□□□□□ -0.31
LDHA-215	ENST00000537296	CFHR5	Q9BXR6	569 aa		13.1	□□□□□ -0.31
LDHA-215	ENST00000537296	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
LDHA-215	ENST00000537296	KCNH4	Q9UQ05	1017 aa		13.1	□□□□□ -0.31
LDHA-215	ENST00000537296	CYP2D6	P10635	497 aa		13.09	□□□□□ -0.31
LDHA-215	ENST00000537296	CETP	P11597	493 aa		13.09	□□□□□ -0.31
LDHA-215	ENST00000537296	CAP2	P40123	477 aa		13.09	□□□□□ -0.31
LDHA-215	ENST00000537296	CAP1	Q01518	475 aa		13.09	□□□□□ -0.31
LDHA-215	ENST00000537296	DGKZ	Q13574	1117 aa		13.09	□□□□□ -0.31
LDHA-215	ENST00000537296	UBE3C	Q15386	1083 aa		13.09	□□□□□ -0.31
LDHA-215	ENST00000537296	METTL16	Q86W50	562 aa	Known RBP	13.09	□□□□□ -0.31
LDHA-215	ENST00000537296	FAM212A	Q96EL1	285 aa		13.09	□□□□□ -0.31
LDHA-215	ENST00000537296	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.09	□□□□□ -0.31
LDHA-215	ENST00000537296	RWDD1	Q9H446	243 aa	Predicted RBP	13.09	□□□□□ -0.31
LDHA-215	ENST00000537296	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.09	□□□□□ -0.31
LDHA-215	ENST00000537296	PICK1	Q9NRD5	415 aa		13.09	□□□□□ -0.31
LDHA-215	ENST00000537296	HERC5	Q9UII4	1024 aa	Known RBP	13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms