RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 WDR64B1ANS9 1081 aa7.84□□□□□ -1.15
TNFRSF1A-206ENST00000535038 FAM13AO94988 1023 aa7.84□□□□□ -1.15
TNFRSF1A-206ENST00000535038 NPR3P17342 541 aa7.84□□□□□ -1.15
TNFRSF1A-206ENST00000535038 RRP1P56182 461 aaKnown RBP7.84□□□□□ -1.15
TNFRSF1A-206ENST00000535038 C12orf50Q8NA57 414 aaPredicted RBP7.84□□□□□ -1.15
TNFRSF1A-206ENST00000535038 MFSD14AQ96MC6 490 aa7.84□□□□□ -1.15
TNFRSF1A-206ENST00000535038 TMPRSS13Q9BYE2 586 aa7.84□□□□□ -1.15
TNFRSF1A-206ENST00000535038 CYP4F12Q9HCS2 524 aa7.84□□□□□ -1.15
TNFRSF1A-206ENST00000535038 FOXD3Q9UJU5 478 aaPredicted RBP7.84□□□□□ -1.15
TNFRSF1A-206ENST00000535038 MTMR7Q9Y216 660 aa7.84□□□□□ -1.15
TNFRSF1A-206ENST00000535038 USP32Q8NFA0 1604 aa7.84□□□□□ -1.15
TNFRSF1A-206ENST00000535038 SIGLEC1Q9BZZ2 1709 aa7.83□□□□□ -1.16
TNFRSF1A-206ENST00000535038 ABCC3O15438 1527 aa7.83□□□□□ -1.16
TNFRSF1A-206ENST00000535038 LOC100289279A0A1B0GTE1 492 aa7.83□□□□□ -1.16
TNFRSF1A-206ENST00000535038 ADAMTS4O75173 837 aa7.83□□□□□ -1.16
TNFRSF1A-206ENST00000535038 RXRBP28702 533 aa7.83□□□□□ -1.16
TNFRSF1A-206ENST00000535038 SGO2Q562F6 1265 aa7.83□□□□□ -1.16
TNFRSF1A-206ENST00000535038 BHLHE41Q9C0J9 482 aaPredicted RBP7.83□□□□□ -1.16
TNFRSF1A-206ENST00000535038 SOX17Q9H6I2 414 aaPredicted RBP7.83□□□□□ -1.16
TNFRSF1A-206ENST00000535038 AMOTL2Q9Y2J4 779 aa7.83□□□□□ -1.16
TNFRSF1A-206ENST00000535038 NOS1P29475 1434 aa7.83□□□□□ -1.16
TNFRSF1A-206ENST00000535038 NEO1Q92859 1461 aa7.82□□□□□ -1.16
TNFRSF1A-206ENST00000535038 CAMSAP1Q5T5Y3 1602 aa7.82□□□□□ -1.16
TNFRSF1A-206ENST00000535038 WNT11O96014 354 aa7.82□□□□□ -1.16
TNFRSF1A-206ENST00000535038 TAL1P17542 331 aaPredicted RBP7.82□□□□□ -1.16
TNFRSF1A-206ENST00000535038 PPP2R1AP30153 589 aa7.82□□□□□ -1.16
TNFRSF1A-206ENST00000535038 NPATQ14207 1427 aa7.82□□□□□ -1.16
TNFRSF1A-206ENST00000535038 SMG8Q8ND04 991 aaKnown RBP7.82□□□□□ -1.16
TNFRSF1A-206ENST00000535038 GIMAP7Q8NHV1 300 aa7.82□□□□□ -1.16
TNFRSF1A-206ENST00000535038 SUGCTQ9HAC7 445 aa7.82□□□□□ -1.16
TNFRSF1A-206ENST00000535038 EIF3AQ14152 1382 aaKnown RBP7.82□□□□□ -1.16
TNFRSF1A-206ENST00000535038 RICTORQ6R327 1708 aa7.81□□□□□ -1.16
TNFRSF1A-206ENST00000535038 DIP2CQ9Y2E4 1556 aa7.81□□□□□ -1.16
TNFRSF1A-206ENST00000535038 ARHGAP31Q2M1Z3 1444 aa7.81□□□□□ -1.16
TNFRSF1A-206ENST00000535038 KIF3BO15066 747 aa7.81□□□□□ -1.16
TNFRSF1A-206ENST00000535038 TIAF1O95411 115 aa7.81□□□□□ -1.16
TNFRSF1A-206ENST00000535038 ESRRAP11474 423 aaPredicted RBP7.81□□□□□ -1.16
TNFRSF1A-206ENST00000535038 SF3B2Q13435 895 aaKnown RBP7.81□□□□□ -1.16
TNFRSF1A-206ENST00000535038 KRTAP19-1Q8IUB9 90 aa7.81□□□□□ -1.16
TNFRSF1A-206ENST00000535038 CCDC82Q8N4S0 544 aa7.81□□□□□ -1.16
TNFRSF1A-206ENST00000535038 LATS2Q9NRM7 1088 aa7.81□□□□□ -1.16
TNFRSF1A-206ENST00000535038 ATG3Q9NT62 314 aa7.81□□□□□ -1.16
TNFRSF1A-206ENST00000535038 PIM2Q9P1W9 311 aa7.81□□□□□ -1.16
TNFRSF1A-206ENST00000535038 ADGRF5Q8IZF2 1346 aa7.8□□□□□ -1.16
TNFRSF1A-206ENST00000535038 SHPRHQ149N8 1683 aa7.8□□□□□ -1.16
TNFRSF1A-206ENST00000535038 QRICH2Q9H0J4 1663 aa7.8□□□□□ -1.16
TNFRSF1A-206ENST00000535038 FZD6O60353 706 aa7.8□□□□□ -1.16
TNFRSF1A-206ENST00000535038 TXKP42681 527 aa7.8□□□□□ -1.16
TNFRSF1A-206ENST00000535038 CC2D1BQ5T0F9 858 aaKnown RBP7.8□□□□□ -1.16
TNFRSF1A-206ENST00000535038 PEAR1Q5VY43 1037 aaPredicted RBP7.8□□□□□ -1.16
TNFRSF1A-206ENST00000535038 TRMT2AQ8IZ69 625 aaKnown RBP7.8□□□□□ -1.16
TNFRSF1A-206ENST00000535038 FBXL6Q8N531 539 aa7.8□□□□□ -1.16
TNFRSF1A-206ENST00000535038 RCAN3Q9UKA8 241 aa7.8□□□□□ -1.16
TNFRSF1A-206ENST00000535038 PLEKHH1Q9ULM0 1364 aa7.8□□□□□ -1.16
TNFRSF1A-206ENST00000535038 GLI2P10070 1586 aa7.8□□□□□ -1.16
TNFRSF1A-206ENST00000535038 CD109Q6YHK3 1445 aa7.79□□□□□ -1.16
TNFRSF1A-206ENST00000535038 NEXMIFQ5QGS0 1516 aa7.79□□□□□ -1.16
TNFRSF1A-206ENST00000535038 ARHGEF28Q8N1W1 1705 aaKnown RBP7.79□□□□□ -1.16
TNFRSF1A-206ENST00000535038 EIF4EBP3O60516 100 aaPredicted RBP7.79□□□□□ -1.16
TNFRSF1A-206ENST00000535038 DLGAP3O95886 979 aa7.79□□□□□ -1.16
TNFRSF1A-206ENST00000535038 ABL1P00519 1130 aa7.79□□□□□ -1.16
TNFRSF1A-206ENST00000535038 HOXA10P31260 410 aaPredicted RBP7.79□□□□□ -1.16
TNFRSF1A-206ENST00000535038 FKBP4Q02790 459 aaKnown RBP eCLIP7.79□□□□□ -1.16
TNFRSF1A-206ENST00000535038 GSTM4Q03013 218 aa7.79□□□□□ -1.16
TNFRSF1A-206ENST00000535038 EXOSC6Q5RKV6 272 aaKnown RBP7.79□□□□□ -1.16
TNFRSF1A-206ENST00000535038 GJD3Q8N144 294 aa7.79□□□□□ -1.16
TNFRSF1A-206ENST00000535038 FMNL2Q96PY5 1086 aa7.79□□□□□ -1.16
TNFRSF1A-206ENST00000535038 LEMD3Q9Y2U8 911 aa7.79□□□□□ -1.16
TNFRSF1A-206ENST00000535038 RPGRIP1LQ68CZ1 1315 aa7.78□□□□□ -1.16
TNFRSF1A-206ENST00000535038 ZFYVE9O95405 1425 aa7.78□□□□□ -1.16
TNFRSF1A-206ENST00000535038 FAM95CA0A1B0GW59 222 aa7.78□□□□□ -1.16
TNFRSF1A-206ENST00000535038 METTL12A8MUP2 240 aa7.78□□□□□ -1.16
TNFRSF1A-206ENST00000535038 F13BP05160 661 aa7.78□□□□□ -1.16
TNFRSF1A-206ENST00000535038 DRD2P14416 443 aa7.78□□□□□ -1.16
TNFRSF1A-206ENST00000535038 USP11P51784 963 aa7.78□□□□□ -1.16
TNFRSF1A-206ENST00000535038 NFKBIBQ15653 356 aa7.78□□□□□ -1.16
TNFRSF1A-206ENST00000535038 CPSF6Q16630 551 aaKnown RBP eCLIP7.78□□□□□ -1.16
TNFRSF1A-206ENST00000535038 PAOXQ6QHF9 649 aa7.78□□□□□ -1.16
TNFRSF1A-206ENST00000535038 OSBPL1AQ9BXW6 950 aa7.78□□□□□ -1.16
TNFRSF1A-206ENST00000535038 ZFYVE28Q9HCC9 887 aa7.78□□□□□ -1.16
TNFRSF1A-206ENST00000535038 CCDC87Q9NVE4 849 aa7.78□□□□□ -1.16
TNFRSF1A-206ENST00000535038 POLR3AO14802 1390 aaPredicted RBP7.77□□□□□ -1.17
TNFRSF1A-206ENST00000535038 CNGB1Q14028 1251 aaPredicted RBP7.77□□□□□ -1.17
TNFRSF1A-206ENST00000535038 EXOC6Q8TAG9 804 aa7.77□□□□□ -1.17
TNFRSF1A-206ENST00000535038 FBLIM1Q8WUP2 373 aa7.77□□□□□ -1.17
TNFRSF1A-206ENST00000535038 PUS7Q96PZ0 661 aaKnown RBP7.77□□□□□ -1.17
TNFRSF1A-206ENST00000535038 C14orf93Q9H972 538 aaKnown RBP7.77□□□□□ -1.17
TNFRSF1A-206ENST00000535038 KNSTRNQ9Y448 316 aa7.77□□□□□ -1.17
TNFRSF1A-206ENST00000535038 SOX4Q06945 474 aaPredicted RBP7.76□□□□□ -1.17
TNFRSF1A-206ENST00000535038 ZNF211Q13398 564 aaPredicted RBP7.76□□□□□ -1.17
TNFRSF1A-206ENST00000535038 DUSP27Q5VZP5 1158 aa7.76□□□□□ -1.17
TNFRSF1A-206ENST00000535038 PHLDB3Q6NSJ2 640 aa7.76□□□□□ -1.17
TNFRSF1A-206ENST00000535038 CDPF1Q6NVV7 123 aa7.76□□□□□ -1.17
TNFRSF1A-206ENST00000535038 C2CD4AQ8NCU7 369 aaPredicted RBP7.76□□□□□ -1.17
TNFRSF1A-206ENST00000535038 CCDC136Q96JN2 1154 aa7.76□□□□□ -1.17
TNFRSF1A-206ENST00000535038 YIPF2Q9BWQ6 316 aa7.76□□□□□ -1.17
TNFRSF1A-206ENST00000535038 ANO2Q9NQ90 1003 aa7.76□□□□□ -1.17
TNFRSF1A-206ENST00000535038 ANGEL1Q9UNK9 670 aaKnown RBP7.76□□□□□ -1.17
TNFRSF1A-206ENST00000535038 RNF114Q9Y508 228 aa7.76□□□□□ -1.17
TNFRSF1A-206ENST00000535038 TULP4Q9NRJ4 1543 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms