RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 CYP7A1P22680 504 aa16.33■□□□□ 0.2
CAPN1-228ENST00000534373 HOXD10P28358 340 aa16.33■□□□□ 0.2
CAPN1-228ENST00000534373 TTF1Q15361 905 aaPredicted RBP16.33■□□□□ 0.2
CAPN1-228ENST00000534373 ADGRA1Q86SQ6 560 aa16.33■□□□□ 0.2
CAPN1-228ENST00000534373 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.33■□□□□ 0.2
CAPN1-228ENST00000534373 TGFBRAP1Q8WUH2 860 aa16.33■□□□□ 0.2
CAPN1-228ENST00000534373 GINM1Q9NU53 330 aa16.33■□□□□ 0.2
CAPN1-228ENST00000534373 ADGRA2Q96PE1 1338 aa16.33■□□□□ 0.2
CAPN1-228ENST00000534373 HTTP42858 3142 aa16.32■□□□□ 0.2
CAPN1-228ENST00000534373 IDH1O75874 414 aaKnown RBP16.32■□□□□ 0.2
CAPN1-228ENST00000534373 SLURP2P0DP57 97 aa16.32■□□□□ 0.2
CAPN1-228ENST00000534373 SIRT2Q8IXJ6 389 aa16.32■□□□□ 0.2
CAPN1-228ENST00000534373 PROCA1Q8NCQ7 364 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-228ENST00000534373 CPA4Q9UI42 421 aa16.32■□□□□ 0.2
CAPN1-228ENST00000534373 FLT1P17948 1338 aa16.31■□□□□ 0.2
CAPN1-228ENST00000534373 TRIM75PA6NK02 468 aa16.31■□□□□ 0.2
CAPN1-228ENST00000534373 USP17L5A8MUK1 530 aa16.31■□□□□ 0.2
CAPN1-228ENST00000534373 BCRP11274 1271 aa16.31■□□□□ 0.2
CAPN1-228ENST00000534373 SLC9C1Q4G0N8 1177 aa16.31■□□□□ 0.2
CAPN1-228ENST00000534373 GADL1Q6ZQY3 521 aa16.31■□□□□ 0.2
CAPN1-228ENST00000534373 MAPKAPK5Q8IW41 473 aa16.31■□□□□ 0.2
CAPN1-228ENST00000534373 ZNF280CQ8ND82 737 aa16.31■□□□□ 0.2
CAPN1-228ENST00000534373 ZNF333Q96JL9 665 aa16.31■□□□□ 0.2
CAPN1-228ENST00000534373 IL1RAPL2Q9NP60 686 aa16.31■□□□□ 0.2
CAPN1-228ENST00000534373 AGTPBP1Q9UPW5 1226 aa16.31■□□□□ 0.2
CAPN1-228ENST00000534373 PTCH2Q9Y6C5 1203 aa16.31■□□□□ 0.2
CAPN1-228ENST00000534373 DOCK1Q14185 1865 aa16.31■□□□□ 0.2
CAPN1-228ENST00000534373 MAST2Q6P0Q8 1798 aa16.31■□□□□ 0.2
CAPN1-228ENST00000534373 CENPFP49454 3210 aa16.3■□□□□ 0.2
CAPN1-228ENST00000534373 FAM196BA6NMK8 535 aa16.3■□□□□ 0.2
CAPN1-228ENST00000534373 HLA-DOAP06340 250 aa16.3■□□□□ 0.2
CAPN1-228ENST00000534373 ASNSP08243 561 aa16.3■□□□□ 0.2
CAPN1-228ENST00000534373 IFIT2P09913 472 aaKnown RBP16.3■□□□□ 0.2
CAPN1-228ENST00000534373 PSMC4P43686 418 aa16.3■□□□□ 0.2
CAPN1-228ENST00000534373 MAGEB6Q8N7X4 407 aa16.3■□□□□ 0.2
CAPN1-228ENST00000534373 TMEM106CQ9BVX2 250 aa16.3■□□□□ 0.2
CAPN1-228ENST00000534373 ARHGAP39Q9C0H5 1083 aa16.3■□□□□ 0.2
CAPN1-228ENST00000534373 ANTXR1Q9H6X2 564 aa16.3■□□□□ 0.2
CAPN1-228ENST00000534373 AS3MTQ9HBK9 375 aa16.3■□□□□ 0.2
CAPN1-228ENST00000534373 CYP2C8P10632 490 aa16.29■□□□□ 0.2
CAPN1-228ENST00000534373 SPP2Q13103 211 aa16.29■□□□□ 0.2
CAPN1-228ENST00000534373 PABPC4Q13310 644 aaKnown RBP eCLIP16.29■□□□□ 0.2
CAPN1-228ENST00000534373 SH3D19Q5HYK7 790 aa16.29■□□□□ 0.2
CAPN1-228ENST00000534373 WDR18Q9BV38 432 aa16.29■□□□□ 0.2
CAPN1-228ENST00000534373 TRIM34Q9BYJ4 488 aa16.29■□□□□ 0.2
CAPN1-228ENST00000534373 SRRDQ9UH36 339 aa16.29■□□□□ 0.2
CAPN1-228ENST00000534373 PNMA3Q9UL41 463 aa16.29■□□□□ 0.2
CAPN1-228ENST00000534373 PALD1Q9ULE6 856 aa16.29■□□□□ 0.2
CAPN1-228ENST00000534373 TNRC18O15417 2968 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-228ENST00000534373 FMNL1O95466 1100 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-228ENST00000534373 FCGRTP55899 365 aa16.28■□□□□ 0.2
CAPN1-228ENST00000534373 DYNLL1P63167 89 aaKnown RBP16.28■□□□□ 0.2
CAPN1-228ENST00000534373 RRP1BQ14684 758 aaKnown RBP16.28■□□□□ 0.2
CAPN1-228ENST00000534373 CRACR2BQ8N4Y2 399 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-228ENST00000534373 SMCR8Q8TEV9 937 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-228ENST00000534373 TRIM47Q96LD4 638 aa16.28■□□□□ 0.2
CAPN1-228ENST00000534373 PHIPQ8WWQ0 1821 aa16.28■□□□□ 0.2
CAPN1-228ENST00000534373 MYO5AQ9Y4I1 1855 aaKnown RBP16.27■□□□□ 0.2
CAPN1-228ENST00000534373 POTEFA5A3E0 1075 aa16.27■□□□□ 0.2
CAPN1-228ENST00000534373 CTGFP29279 349 aa16.27■□□□□ 0.2
CAPN1-228ENST00000534373 USP5P45974 858 aa16.27■□□□□ 0.2
CAPN1-228ENST00000534373 MIGA1Q8NAN2 632 aa16.27■□□□□ 0.2
CAPN1-228ENST00000534373 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-228ENST00000534373 NDUFB9Q9Y6M9 179 aa16.27■□□□□ 0.2
CAPN1-228ENST00000534373 PTPRFP10586 1907 aa16.26■□□□□ 0.19
CAPN1-228ENST00000534373 C19orf81C9J6K1 198 aa16.26■□□□□ 0.19
CAPN1-228ENST00000534373 APBB1O00213 710 aa16.26■□□□□ 0.19
CAPN1-228ENST00000534373 OSBPP22059 807 aa16.26■□□□□ 0.19
CAPN1-228ENST00000534373 GCLCP48506 637 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-228ENST00000534373 BACE1P56817 501 aa16.26■□□□□ 0.19
CAPN1-228ENST00000534373 SLC9C2Q5TAH2 1124 aa16.26■□□□□ 0.19
CAPN1-228ENST00000534373 TTC6Q86TZ1 520 aa16.26■□□□□ 0.19
CAPN1-228ENST00000534373 CCDC84Q86UT8 332 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-228ENST00000534373 EHD4Q9H223 541 aa16.26■□□□□ 0.19
CAPN1-228ENST00000534373 DNAJC18Q9H819 358 aa16.26■□□□□ 0.19
CAPN1-228ENST00000534373 FOCADQ5VW36 1801 aa16.26■□□□□ 0.19
CAPN1-228ENST00000534373 PDE4DIPQ5VU43 2346 aa16.25■□□□□ 0.19
CAPN1-228ENST00000534373 ATP5JP18859 108 aa16.25■□□□□ 0.19
CAPN1-228ENST00000534373 HMGCS2P54868 508 aa16.25■□□□□ 0.19
CAPN1-228ENST00000534373 TREML2Q5T2D2 321 aa16.25■□□□□ 0.19
CAPN1-228ENST00000534373 C20orf194Q5TEA3 1177 aa16.25■□□□□ 0.19
CAPN1-228ENST00000534373 TATDN1Q6P1N9 297 aa16.25■□□□□ 0.19
CAPN1-228ENST00000534373 RAET1EQ8TD07 263 aa16.25■□□□□ 0.19
CAPN1-228ENST00000534373 RIOK1Q9BRS2 568 aaKnown RBP16.25■□□□□ 0.19
CAPN1-228ENST00000534373 SAP30BPQ9UHR5 308 aaKnown RBP16.25■□□□□ 0.19
CAPN1-228ENST00000534373 SERPINB13Q9UIV8 391 aa16.25■□□□□ 0.19
CAPN1-228ENST00000534373 KIAA0100Q14667 2235 aaKnown RBP16.25■□□□□ 0.19
CAPN1-228ENST00000534373 MYPNQ86TC9 1320 aa16.24■□□□□ 0.19
CAPN1-228ENST00000534373 MAGEB6P1A0A0J9YX57 407 aa16.24■□□□□ 0.19
CAPN1-228ENST00000534373 USP17L10C9JJH3 530 aa16.24■□□□□ 0.19
CAPN1-228ENST00000534373 PDE6AP16499 860 aa16.24■□□□□ 0.19
CAPN1-228ENST00000534373 HOXA7P31268 230 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-228ENST00000534373 FAM110CQ1W6H9 321 aa16.24■□□□□ 0.19
CAPN1-228ENST00000534373 SLC4A8Q2Y0W8 1093 aa16.24■□□□□ 0.19
CAPN1-228ENST00000534373 LRRCC1Q9C099 1032 aa16.24■□□□□ 0.19
CAPN1-228ENST00000534373 TMOD4Q9NZQ9 345 aa16.24■□□□□ 0.19
CAPN1-228ENST00000534373 TAOK2Q9UL54 1235 aa16.24■□□□□ 0.19
CAPN1-228ENST00000534373 CDK5RAP2Q96SN8 1893 aa16.24■□□□□ 0.19
CAPN1-228ENST00000534373 BRCA2P51587 3418 aa16.23■□□□□ 0.19
CAPN1-228ENST00000534373 RBBP6Q7Z6E9 1792 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms