RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 IFI16Q16666 785 aaKnown RBP6.83□□□□□ -1.32
ITGB1-219ENST00000534049 RASIP1Q5U651 963 aa6.83□□□□□ -1.32
ITGB1-219ENST00000534049 MPRIPQ6WCQ1 1025 aa6.83□□□□□ -1.32
ITGB1-219ENST00000534049 CYFIP1Q7L576 1253 aa6.83□□□□□ -1.32
ITGB1-219ENST00000534049 C12orf40Q86WS4 652 aa6.83□□□□□ -1.32
ITGB1-219ENST00000534049 TP53INP2Q8IXH6 220 aa6.83□□□□□ -1.32
ITGB1-219ENST00000534049 TOP6BLQ8N6T0 577 aa6.83□□□□□ -1.32
ITGB1-219ENST00000534049 FLCNQ8NFG4 579 aa6.83□□□□□ -1.32
ITGB1-219ENST00000534049 PRDM10Q9NQV6 1147 aa6.83□□□□□ -1.32
ITGB1-219ENST00000534049 CSADQ9Y600 493 aa6.83□□□□□ -1.32
ITGB1-219ENST00000534049 TMEM265A0A087WTH1 108 aa6.82□□□□□ -1.32
ITGB1-219ENST00000534049 ADAMTS4O75173 837 aa6.82□□□□□ -1.32
ITGB1-219ENST00000534049 PWP1Q13610 501 aa6.82□□□□□ -1.32
ITGB1-219ENST00000534049 CCDC84Q86UT8 332 aaPredicted RBP6.82□□□□□ -1.32
ITGB1-219ENST00000534049 PLPPR2Q96GM1 343 aa6.82□□□□□ -1.32
ITGB1-219ENST00000534049 WNT10AQ9GZT5 417 aa6.82□□□□□ -1.32
ITGB1-219ENST00000534049 USP31Q70CQ4 1352 aa6.82□□□□□ -1.32
ITGB1-219ENST00000534049 PRAMEF27A3QJZ7 478 aa6.81□□□□□ -1.32
ITGB1-219ENST00000534049 PAX4O43316 350 aa6.81□□□□□ -1.32
ITGB1-219ENST00000534049 CEACAM5P06731 702 aa6.81□□□□□ -1.32
ITGB1-219ENST00000534049 WIPI1Q5MNZ9 446 aaPredicted RBP6.81□□□□□ -1.32
ITGB1-219ENST00000534049 ZNF746Q6NUN9 644 aaPredicted RBP6.81□□□□□ -1.32
ITGB1-219ENST00000534049 LRFN4Q6PJG9 635 aa6.81□□□□□ -1.32
ITGB1-219ENST00000534049 HID1Q8IV36 788 aa6.81□□□□□ -1.32
ITGB1-219ENST00000534049 VAV3Q9UKW4 847 aa6.81□□□□□ -1.32
ITGB1-219ENST00000534049 SNX11Q9Y5W9 270 aa6.81□□□□□ -1.32
ITGB1-219ENST00000534049 ZBTB7CA1YPR0 619 aa6.8□□□□□ -1.32
ITGB1-219ENST00000534049 LEFTY1O75610 366 aa6.8□□□□□ -1.32
ITGB1-219ENST00000534049 ETF1P62495 437 aaKnown RBP6.8□□□□□ -1.32
ITGB1-219ENST00000534049 PRKCQQ04759 706 aa6.8□□□□□ -1.32
ITGB1-219ENST00000534049 PDE4BQ07343 736 aa6.8□□□□□ -1.32
ITGB1-219ENST00000534049 INPP5AQ14642 412 aa6.8□□□□□ -1.32
ITGB1-219ENST00000534049 TSNAXIP1Q2TAA8 658 aa6.8□□□□□ -1.32
ITGB1-219ENST00000534049 ZNF326Q5BKZ1 582 aaKnown RBP6.8□□□□□ -1.32
ITGB1-219ENST00000534049 MEI1Q5TIA1 1274 aa6.8□□□□□ -1.32
ITGB1-219ENST00000534049 ARMCX6Q7L4S7 300 aa6.8□□□□□ -1.32
ITGB1-219ENST00000534049 MFSD2AQ8NA29 543 aa6.8□□□□□ -1.32
ITGB1-219ENST00000534049 BCL7CQ8WUZ0 217 aaPredicted RBP6.8□□□□□ -1.32
ITGB1-219ENST00000534049 COX4I2Q96KJ9 171 aa6.8□□□□□ -1.32
ITGB1-219ENST00000534049 VTI1BQ9UEU0 232 aa6.8□□□□□ -1.32
ITGB1-219ENST00000534049 MAPK8IP1Q9UQF2 711 aa6.8□□□□□ -1.32
ITGB1-219ENST00000534049 GNAT3A8MTJ3 354 aa6.79□□□□□ -1.32
ITGB1-219ENST00000534049 OXCT1P55809 520 aa6.79□□□□□ -1.32
ITGB1-219ENST00000534049 ABI1Q8IZP0 508 aa6.79□□□□□ -1.32
ITGB1-219ENST00000534049 HRASLS5Q96KN8 279 aa6.79□□□□□ -1.32
ITGB1-219ENST00000534049 FOXQ1Q9C009 403 aa6.79□□□□□ -1.32
ITGB1-219ENST00000534049 PRDM5Q9NQX1 630 aaPredicted RBP6.79□□□□□ -1.32
ITGB1-219ENST00000534049 ADGRE2Q9UHX3 823 aa6.79□□□□□ -1.32
ITGB1-219ENST00000534049 PTPN11Q06124 597 aaPredicted RBP6.78□□□□□ -1.32
ITGB1-219ENST00000534049 MAP3K11Q16584 847 aa6.78□□□□□ -1.32
ITGB1-219ENST00000534049 PLD6Q8N2A8 252 aaKnown RBP6.78□□□□□ -1.32
ITGB1-219ENST00000534049 FAM181AQ8N9Y4 354 aa6.78□□□□□ -1.32
ITGB1-219ENST00000534049 PAK6Q9NQU5 681 aaPredicted RBP6.78□□□□□ -1.32
ITGB1-219ENST00000534049 RNF19AQ9NV58 838 aa6.78□□□□□ -1.32
ITGB1-219ENST00000534049 BPNT1O95861 308 aa6.77□□□□□ -1.33
ITGB1-219ENST00000534049 CTSHP09668 335 aa6.77□□□□□ -1.33
ITGB1-219ENST00000534049 TAL1P17542 331 aaPredicted RBP6.77□□□□□ -1.33
ITGB1-219ENST00000534049 CLCN7P51798 805 aa6.77□□□□□ -1.33
ITGB1-219ENST00000534049 RPL6Q02878 288 aaKnown RBP6.77□□□□□ -1.33
ITGB1-219ENST00000534049 SEPT6Q14141 434 aa6.77□□□□□ -1.33
ITGB1-219ENST00000534049 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.77□□□□□ -1.33
ITGB1-219ENST00000534049 C22orf34Q6ZV56 151 aa6.77□□□□□ -1.33
ITGB1-219ENST00000534049 PHC3Q8NDX5 983 aa6.77□□□□□ -1.33
ITGB1-219ENST00000534049 ASB11Q8WXH4 323 aa6.77□□□□□ -1.33
ITGB1-219ENST00000534049 BCL2L13Q9BXK5 485 aa6.77□□□□□ -1.33
ITGB1-219ENST00000534049 TNKS2Q9H2K2 1166 aa6.77□□□□□ -1.33
ITGB1-219ENST00000534049 ADAM30Q9UKF2 790 aa6.77□□□□□ -1.33
ITGB1-219ENST00000534049 GFRA2O00451 464 aa6.76□□□□□ -1.33
ITGB1-219ENST00000534049 CST3P01034 146 aaPredicted RBP6.76□□□□□ -1.33
ITGB1-219ENST00000534049 TFE3P19532 575 aaPredicted RBP6.76□□□□□ -1.33
ITGB1-219ENST00000534049 CYP7A1P22680 504 aa6.76□□□□□ -1.33
ITGB1-219ENST00000534049 GRK4P32298 578 aa6.76□□□□□ -1.33
ITGB1-219ENST00000534049 LMNB2Q03252 620 aa6.76□□□□□ -1.33
ITGB1-219ENST00000534049 SLBPQ14493 270 aaKnown RBP eCLIP6.76□□□□□ -1.33
ITGB1-219ENST00000534049 PLCL1Q15111 1095 aa6.76□□□□□ -1.33
ITGB1-219ENST00000534049 NFXL1Q6ZNB6 911 aa6.76□□□□□ -1.33
ITGB1-219ENST00000534049 RELL1Q8IUW5 271 aa6.76□□□□□ -1.33
ITGB1-219ENST00000534049 RSRP1Q9BUV0 290 aa6.76□□□□□ -1.33
ITGB1-219ENST00000534049 PCDHB5Q9Y5E4 795 aa6.76□□□□□ -1.33
ITGB1-219ENST00000534049 BIN1O00499 593 aa6.75□□□□□ -1.33
ITGB1-219ENST00000534049 JUNBP17275 347 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-219ENST00000534049 ITIH2P19823 946 aa6.75□□□□□ -1.33
ITGB1-219ENST00000534049 AOC3Q16853 763 aa6.75□□□□□ -1.33
ITGB1-219ENST00000534049 TMCO4Q5TGY1 634 aa6.75□□□□□ -1.33
ITGB1-219ENST00000534049 ANGEL2Q5VTE6 544 aaKnown RBP6.75□□□□□ -1.33
ITGB1-219ENST00000534049 CBLL1Q75N03 491 aa6.75□□□□□ -1.33
ITGB1-219ENST00000534049 FAM214BQ7L5A3 538 aa6.75□□□□□ -1.33
ITGB1-219ENST00000534049 UBE3DQ7Z6J8 389 aa6.75□□□□□ -1.33
ITGB1-219ENST00000534049 MRPL41Q8IXM3 137 aaKnown RBP6.75□□□□□ -1.33
ITGB1-219ENST00000534049 HEXIM2Q96MH2 286 aaKnown RBP6.75□□□□□ -1.33
ITGB1-219ENST00000534049 FAM161BQ96MY7 647 aa6.75□□□□□ -1.33
ITGB1-219ENST00000534049 KRTAP4-8Q9BYQ9 185 aa6.75□□□□□ -1.33
ITGB1-219ENST00000534049 TPX2Q9ULW0 747 aaKnown RBP6.75□□□□□ -1.33
ITGB1-219ENST00000534049 EOMESO95936 686 aa6.74□□□□□ -1.33
ITGB1-219ENST00000534049 PGRP06401 933 aa6.74□□□□□ -1.33
ITGB1-219ENST00000534049 FUT4P22083 530 aa6.74□□□□□ -1.33
ITGB1-219ENST00000534049 TXKP42681 527 aa6.74□□□□□ -1.33
ITGB1-219ENST00000534049 SFRP5Q5T4F7 317 aa6.74□□□□□ -1.33
ITGB1-219ENST00000534049 SLC6A19Q695T7 634 aa6.74□□□□□ -1.33
ITGB1-219ENST00000534049 TMEM74Q96NL1 305 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms