RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	IRAK1	P51617	712 aa		7.61	□□□□□ -1.19
ATM-223	ENST00000533979	TAGLN	Q01995	201 aa	Known RBP	7.61	□□□□□ -1.19
ATM-223	ENST00000533979	MEI1	Q5TIA1	1274 aa		7.61	□□□□□ -1.19
ATM-223	ENST00000533979	VSIG10L	Q86VR7	867 aa		7.61	□□□□□ -1.19
ATM-223	ENST00000533979	NETO1	Q8TDF5	533 aa		7.61	□□□□□ -1.19
ATM-223	ENST00000533979	GAL3ST3	Q96A11	431 aa		7.61	□□□□□ -1.19
ATM-223	ENST00000533979	PRDM10	Q9NQV6	1147 aa		7.61	□□□□□ -1.19
ATM-223	ENST00000533979	PCDHB5	Q9Y5E4	795 aa		7.61	□□□□□ -1.19
ATM-223	ENST00000533979	CAP2	P40123	477 aa		7.6	□□□□□ -1.19
ATM-223	ENST00000533979	LIG3	P49916	1009 aa		7.6	□□□□□ -1.19
ATM-223	ENST00000533979	CCDC84	Q86UT8	332 aa	Predicted RBP	7.6	□□□□□ -1.19
ATM-223	ENST00000533979	STK11IP	Q8N1F8	1099 aa		7.6	□□□□□ -1.19
ATM-223	ENST00000533979	RGS22	Q8NE09	1264 aa		7.6	□□□□□ -1.19
ATM-223	ENST00000533979	MISP3	Q96FF7	219 aa		7.6	□□□□□ -1.19
ATM-223	ENST00000533979	PLPPR2	Q96GM1	343 aa		7.6	□□□□□ -1.19
ATM-223	ENST00000533979	FAM161B	Q96MY7	647 aa		7.6	□□□□□ -1.19
ATM-223	ENST00000533979	VAV3	Q9UKW4	847 aa		7.6	□□□□□ -1.19
ATM-223	ENST00000533979	LRIG2	O94898	1065 aa		7.59	□□□□□ -1.19
ATM-223	ENST00000533979	OXCT1	P55809	520 aa		7.59	□□□□□ -1.19
ATM-223	ENST00000533979	TSNAXIP1	Q2TAA8	658 aa		7.59	□□□□□ -1.19
ATM-223	ENST00000533979	NFXL1	Q6ZNB6	911 aa		7.59	□□□□□ -1.19
ATM-223	ENST00000533979	TOP6BL	Q8N6T0	577 aa		7.59	□□□□□ -1.19
ATM-223	ENST00000533979	HEXIM2	Q96MH2	286 aa	Known RBP	7.59	□□□□□ -1.19
ATM-223	ENST00000533979	RSRP1	Q9BUV0	290 aa		7.59	□□□□□ -1.19
ATM-223	ENST00000533979	MIR1-1HG	Q9H1L0	117 aa		7.59	□□□□□ -1.19
ATM-223	ENST00000533979	GTF2IRD1	Q9UHL9	959 aa		7.59	□□□□□ -1.19
ATM-223	ENST00000533979	SLC5A6	Q9Y289	635 aa		7.59	□□□□□ -1.19
ATM-223	ENST00000533979	SNX11	Q9Y5W9	270 aa		7.59	□□□□□ -1.19
ATM-223	ENST00000533979	TFE3	P19532	575 aa	Predicted RBP	7.58	□□□□□ -1.2
ATM-223	ENST00000533979	MAP3K11	Q16584	847 aa		7.58	□□□□□ -1.2
ATM-223	ENST00000533979	ZNF326	Q5BKZ1	582 aa	Known RBP	7.58	□□□□□ -1.2
ATM-223	ENST00000533979	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	7.58	□□□□□ -1.2
ATM-223	ENST00000533979	HID1	Q8IV36	788 aa		7.58	□□□□□ -1.2
ATM-223	ENST00000533979	TP53INP2	Q8IXH6	220 aa		7.58	□□□□□ -1.2
ATM-223	ENST00000533979	MFSD2A	Q8NA29	543 aa		7.58	□□□□□ -1.2
ATM-223	ENST00000533979	AGBL5	Q8NDL9	886 aa		7.58	□□□□□ -1.2
ATM-223	ENST00000533979	BCL7C	Q8WUZ0	217 aa	Predicted RBP	7.58	□□□□□ -1.2
ATM-223	ENST00000533979	FOXQ1	Q9C009	403 aa		7.58	□□□□□ -1.2
ATM-223	ENST00000533979	MRS2	Q9HD23	443 aa		7.58	□□□□□ -1.2
ATM-223	ENST00000533979	ADGRE2	Q9UHX3	823 aa		7.58	□□□□□ -1.2
ATM-223	ENST00000533979	TMEM265	A0A087WTH1	108 aa		7.57	□□□□□ -1.2
ATM-223	ENST00000533979	TAL1	P17542	331 aa	Predicted RBP	7.57	□□□□□ -1.2
ATM-223	ENST00000533979	CDK8	P49336	464 aa		7.57	□□□□□ -1.2
ATM-223	ENST00000533979	PRKCQ	Q04759	706 aa		7.57	□□□□□ -1.2
ATM-223	ENST00000533979	SLBP	Q14493	270 aa	Known RBP eCLIP	7.57	□□□□□ -1.2
ATM-223	ENST00000533979	DIEXF	Q68CQ4	756 aa	Known RBP	7.57	□□□□□ -1.2
ATM-223	ENST00000533979	MCTP1	Q6DN14	999 aa		7.57	□□□□□ -1.2
ATM-223	ENST00000533979	UBE3D	Q7Z6J8	389 aa		7.57	□□□□□ -1.2
ATM-223	ENST00000533979	RELL1	Q8IUW5	271 aa		7.57	□□□□□ -1.2
ATM-223	ENST00000533979	CRELD1	Q96HD1	420 aa		7.57	□□□□□ -1.2
ATM-223	ENST00000533979	EOMES	O95936	686 aa		7.56	□□□□□ -1.2
ATM-223	ENST00000533979	ETF1	P62495	437 aa	Known RBP	7.56	□□□□□ -1.2
ATM-223	ENST00000533979	RPL6	Q02878	288 aa	Known RBP	7.56	□□□□□ -1.2
ATM-223	ENST00000533979	IFI16	Q16666	785 aa	Known RBP	7.56	□□□□□ -1.2
ATM-223	ENST00000533979	WIPI1	Q5MNZ9	446 aa	Predicted RBP	7.56	□□□□□ -1.2
ATM-223	ENST00000533979	TMCO4	Q5TGY1	634 aa		7.56	□□□□□ -1.2
ATM-223	ENST00000533979	ARHGAP27	Q6ZUM4	889 aa		7.56	□□□□□ -1.2
ATM-223	ENST00000533979	ABI1	Q8IZP0	508 aa		7.56	□□□□□ -1.2
ATM-223	ENST00000533979	PLD6	Q8N2A8	252 aa	Known RBP	7.56	□□□□□ -1.2
ATM-223	ENST00000533979	FAM181A	Q8N9Y4	354 aa		7.56	□□□□□ -1.2
ATM-223	ENST00000533979	PHC3	Q8NDX5	983 aa		7.56	□□□□□ -1.2
ATM-223	ENST00000533979	PAK6	Q9NQU5	681 aa	Predicted RBP	7.56	□□□□□ -1.2
ATM-223	ENST00000533979	PLAGL2	Q9UPG8	496 aa		7.56	□□□□□ -1.2
ATM-223	ENST00000533979	TLR6	Q9Y2C9	796 aa		7.56	□□□□□ -1.2
ATM-223	ENST00000533979	PRAMEF27	A3QJZ7	478 aa		7.55	□□□□□ -1.2
ATM-223	ENST00000533979	LMNB2	Q03252	620 aa		7.55	□□□□□ -1.2
ATM-223	ENST00000533979	BNIP3	Q12983	259 aa		7.55	□□□□□ -1.2
ATM-223	ENST00000533979	PWP1	Q13610	501 aa		7.55	□□□□□ -1.2
ATM-223	ENST00000533979	SEPT6	Q14141	434 aa		7.55	□□□□□ -1.2
ATM-223	ENST00000533979	ARMCX6	Q7L4S7	300 aa		7.55	□□□□□ -1.2
ATM-223	ENST00000533979	SPRED2	Q7Z698	418 aa		7.55	□□□□□ -1.2
ATM-223	ENST00000533979	JARID2	Q92833	1246 aa	Predicted RBP	7.55	□□□□□ -1.2
ATM-223	ENST00000533979	BCL2L13	Q9BXK5	485 aa		7.55	□□□□□ -1.2
ATM-223	ENST00000533979	TNKS2	Q9H2K2	1166 aa		7.55	□□□□□ -1.2
ATM-223	ENST00000533979	FBRS	Q9HAH7	460 aa		7.55	□□□□□ -1.2
ATM-223	ENST00000533979	VTI1B	Q9UEU0	232 aa		7.55	□□□□□ -1.2
ATM-223	ENST00000533979	CEACAM5	P06731	702 aa		7.54	□□□□□ -1.2
ATM-223	ENST00000533979	GRK4	P32298	578 aa		7.54	□□□□□ -1.2
ATM-223	ENST00000533979	CAMK2G	Q13555	558 aa	Predicted RBP	7.54	□□□□□ -1.2
ATM-223	ENST00000533979	CBLL1	Q75N03	491 aa		7.54	□□□□□ -1.2
ATM-223	ENST00000533979	FLCN	Q8NFG4	579 aa		7.54	□□□□□ -1.2
ATM-223	ENST00000533979	TMEM74	Q96NL1	305 aa		7.54	□□□□□ -1.2
ATM-223	ENST00000533979	KRTAP4-8	Q9BYQ9	185 aa		7.54	□□□□□ -1.2
ATM-223	ENST00000533979	SLITRK5	O94991	958 aa		7.53	□□□□□ -1.2
ATM-223	ENST00000533979	CST3	P01034	146 aa	Predicted RBP	7.53	□□□□□ -1.2
ATM-223	ENST00000533979	PDE4B	Q07343	736 aa		7.53	□□□□□ -1.2
ATM-223	ENST00000533979	NKG7	Q16617	165 aa		7.53	□□□□□ -1.2
ATM-223	ENST00000533979	AOC3	Q16853	763 aa		7.53	□□□□□ -1.2
ATM-223	ENST00000533979	SLC6A19	Q695T7	634 aa		7.53	□□□□□ -1.2
ATM-223	ENST00000533979	FAM221A	A4D161	298 aa		7.52	□□□□□ -1.21
ATM-223	ENST00000533979	PF4	P02776	101 aa		7.52	□□□□□ -1.21
ATM-223	ENST00000533979	MFAP1	P55081	439 aa	Known RBP	7.52	□□□□□ -1.21
ATM-223	ENST00000533979	MCAT	Q8IVS2	390 aa	Known RBP	7.52	□□□□□ -1.21
ATM-223	ENST00000533979	MRPL41	Q8IXM3	137 aa	Known RBP	7.52	□□□□□ -1.21
ATM-223	ENST00000533979	GATAD2B	Q8WXI9	593 aa		7.52	□□□□□ -1.21
ATM-223	ENST00000533979	HRASLS5	Q96KN8	279 aa		7.52	□□□□□ -1.21
ATM-223	ENST00000533979	BCL11A	Q9H165	835 aa		7.52	□□□□□ -1.21
ATM-223	ENST00000533979	ADAM30	Q9UKF2	790 aa		7.52	□□□□□ -1.21
ATM-223	ENST00000533979	MAPK8IP1	Q9UQF2	711 aa		7.52	□□□□□ -1.21
ATM-223	ENST00000533979		U3KQE9	123 aa		7.52	□□□□□ -1.21

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