RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 MYO5AQ9Y4I1 1855 aaKnown RBP22.14■■□□□ 1.14
CAPN1-226ENST00000533820 CUTAO60888 179 aa22.14■■□□□ 1.14
CAPN1-226ENST00000533820 TDO2P48775 406 aa22.14■■□□□ 1.14
CAPN1-226ENST00000533820 TOB1P50616 345 aaPredicted RBP22.14■■□□□ 1.14
CAPN1-226ENST00000533820 GNG11P61952 73 aa22.14■■□□□ 1.14
CAPN1-226ENST00000533820 KARSQ15046 597 aaKnown RBP22.14■■□□□ 1.14
CAPN1-226ENST00000533820 CADPS2Q86UW7 1296 aa22.14■■□□□ 1.14
CAPN1-226ENST00000533820 OXER1Q8TDS5 423 aa22.14■■□□□ 1.14
CAPN1-226ENST00000533820 CPLX3Q8WVH0 158 aa22.14■■□□□ 1.14
CAPN1-226ENST00000533820 KCND1Q9NSA2 647 aa22.14■■□□□ 1.14
CAPN1-226ENST00000533820 PSEN1P49768 467 aa22.14■■□□□ 1.13
CAPN1-226ENST00000533820 GIGYF2Q6Y7W6 1299 aaKnown RBP22.14■■□□□ 1.13
CAPN1-226ENST00000533820 TICAM2Q86XR7 235 aa22.14■■□□□ 1.13
CAPN1-226ENST00000533820 REXO1L1PQ8IX06 675 aa22.14■■□□□ 1.13
CAPN1-226ENST00000533820 ZSWIM4Q9H7M6 989 aa22.14■■□□□ 1.13
CAPN1-226ENST00000533820 SAMSN1Q9NSI8 373 aaKnown RBP22.14■■□□□ 1.13
CAPN1-226ENST00000533820 KCPQ6ZWJ8 1503 aa22.13■■□□□ 1.13
CAPN1-226ENST00000533820 COBLO75128 1261 aa22.13■■□□□ 1.13
CAPN1-226ENST00000533820 TTF1Q15361 905 aaPredicted RBP22.13■■□□□ 1.13
CAPN1-226ENST00000533820 WDR24Q96S15 920 aa22.13■■□□□ 1.13
CAPN1-226ENST00000533820 MAN1B1Q9UKM7 699 aa22.13■■□□□ 1.13
CAPN1-226ENST00000533820 STARD3NLO95772 234 aa22.13■■□□□ 1.13
CAPN1-226ENST00000533820 HNRNPH2P55795 449 aaKnown RBP22.13■■□□□ 1.13
CAPN1-226ENST00000533820 STX17P56962 302 aa22.13■■□□□ 1.13
CAPN1-226ENST00000533820 SAFBQ15424 915 aaKnown RBP eCLIP22.13■■□□□ 1.13
CAPN1-226ENST00000533820 SAMD1Q6SPF0 538 aaPredicted RBP22.13■■□□□ 1.13
CAPN1-226ENST00000533820 TOGARAM2Q6ZUX3 1019 aa22.13■■□□□ 1.13
CAPN1-226ENST00000533820 TMEM87BQ96K49 555 aa22.13■■□□□ 1.13
CAPN1-226ENST00000533820 PPP2R2CQ9Y2T4 447 aa22.13■■□□□ 1.13
CAPN1-226ENST00000533820 FAM205CA6NFA0 338 aa22.12■■□□□ 1.13
CAPN1-226ENST00000533820 UBE3CQ15386 1083 aa22.12■■□□□ 1.13
CAPN1-226ENST00000533820 SEC31BQ9NQW1 1179 aa22.12■■□□□ 1.13
CAPN1-226ENST00000533820 MAP3K15Q6ZN16 1313 aa22.12■■□□□ 1.13
CAPN1-226ENST00000533820 POLR3GO15318 223 aaPredicted RBP22.12■■□□□ 1.13
CAPN1-226ENST00000533820 AFMP43652 599 aa22.12■■□□□ 1.13
CAPN1-226ENST00000533820 POSTNQ15063 836 aa22.12■■□□□ 1.13
CAPN1-226ENST00000533820 MFSD6Q6ZSS7 791 aa22.12■■□□□ 1.13
CAPN1-226ENST00000533820 BAG1Q99933 345 aaPredicted RBP22.12■■□□□ 1.13
CAPN1-226ENST00000533820 ZBTB1Q9Y2K1 713 aa22.12■■□□□ 1.13
CAPN1-226ENST00000533820 NUP188Q5SRE5 1749 aa22.12■■□□□ 1.13
CAPN1-226ENST00000533820 H2AFXP16104 143 aaPredicted RBP22.12■■□□□ 1.13
CAPN1-226ENST00000533820 RASGRF1Q13972 1273 aa22.12■■□□□ 1.13
CAPN1-226ENST00000533820 IRX2Q9BZI1 471 aaPredicted RBP22.12■■□□□ 1.13
CAPN1-226ENST00000533820 CABP5Q9NP86 173 aa22.12■■□□□ 1.13
CAPN1-226ENST00000533820 FBXO3Q9UK99 471 aa22.12■■□□□ 1.13
CAPN1-226ENST00000533820 LAMB4A4D0S4 1761 aa22.11■■□□□ 1.13
CAPN1-226ENST00000533820 TRIM28Q13263 835 aaKnown RBP22.11■■□□□ 1.13
CAPN1-226ENST00000533820 VGLL2Q8N8G2 317 aa22.11■■□□□ 1.13
CAPN1-226ENST00000533820 SPATA5Q8NB90 893 aa22.11■■□□□ 1.13
CAPN1-226ENST00000533820 MINDY4BA8MYZ0 360 aa22.11■■□□□ 1.13
CAPN1-226ENST00000533820 MTF1Q14872 753 aa22.11■■□□□ 1.13
CAPN1-226ENST00000533820 TCRBV5S4A2TA0A5A2 114 aa22.1■■□□□ 1.13
CAPN1-226ENST00000533820 VWA3AA6NCI4 1184 aa22.1■■□□□ 1.13
CAPN1-226ENST00000533820 RTN1Q16799 776 aa22.1■■□□□ 1.13
CAPN1-226ENST00000533820 TEX35Q5T0J7 233 aa22.1■■□□□ 1.13
CAPN1-226ENST00000533820 LCORLQ8N3X6 602 aa22.1■■□□□ 1.13
CAPN1-226ENST00000533820 SLC4A4Q9Y6R1 1079 aa22.1■■□□□ 1.13
CAPN1-226ENST00000533820 WDR19Q8NEZ3 1342 aa22.1■■□□□ 1.13
CAPN1-226ENST00000533820 CREBRFQ8IUR6 639 aa22.1■■□□□ 1.13
CAPN1-226ENST00000533820 TRIM22Q8IYM9 498 aa22.1■■□□□ 1.13
CAPN1-226ENST00000533820 STAMQ92783 540 aa22.1■■□□□ 1.13
CAPN1-226ENST00000533820 FHOD1Q9Y613 1164 aa22.1■■□□□ 1.13
CAPN1-226ENST00000533820 BMS1Q14692 1282 aaKnown RBP22.1■■□□□ 1.13
CAPN1-226ENST00000533820 SMARCE1Q969G3 411 aa22.1■■□□□ 1.13
CAPN1-226ENST00000533820 DHX58Q96C10 678 aa22.1■■□□□ 1.13
CAPN1-226ENST00000533820 PATL2C9JE40 543 aaKnown RBP22.09■■□□□ 1.13
CAPN1-226ENST00000533820 MMP1P03956 469 aa22.09■■□□□ 1.13
CAPN1-226ENST00000533820 PNMA6AP0CW24 399 aaPredicted RBP22.09■■□□□ 1.13
CAPN1-226ENST00000533820 HSPA2P54652 639 aa22.09■■□□□ 1.13
CAPN1-226ENST00000533820 AKNAD1Q5T1N1 836 aa22.09■■□□□ 1.13
CAPN1-226ENST00000533820 SMYD4Q8IYR2 804 aaPredicted RBP22.09■■□□□ 1.13
CAPN1-226ENST00000533820 PLA2G12BQ9BX93 195 aa22.09■■□□□ 1.13
CAPN1-226ENST00000533820 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.09■■□□□ 1.13
CAPN1-226ENST00000533820 PARP3Q9Y6F1 533 aa22.09■■□□□ 1.13
CAPN1-226ENST00000533820 BCAMP50895 628 aa22.09■■□□□ 1.13
CAPN1-226ENST00000533820 RAD51AP2Q09MP3 1159 aa22.09■■□□□ 1.13
CAPN1-226ENST00000533820 WTAPQ15007 396 aa22.09■■□□□ 1.13
CAPN1-226ENST00000533820 TMEM139Q8IV31 216 aa22.09■■□□□ 1.13
CAPN1-226ENST00000533820 PKD1L3Q7Z443 1732 aa22.09■■□□□ 1.13
CAPN1-226ENST00000533820 GSG1L2A8MUP6 293 aa22.08■■□□□ 1.13
CAPN1-226ENST00000533820 PRDM1O75626 825 aa22.08■■□□□ 1.13
CAPN1-226ENST00000533820 FMNL1O95466 1100 aaPredicted RBP22.08■■□□□ 1.13
CAPN1-226ENST00000533820 MAP3K12Q12852 859 aa22.08■■□□□ 1.13
CAPN1-226ENST00000533820 NKX1-1Q15270 411 aaPredicted RBP22.08■■□□□ 1.13
CAPN1-226ENST00000533820 BRINP3Q76B58 766 aa22.08■■□□□ 1.13
CAPN1-226ENST00000533820 BAZ2BQ9UIF8 2168 aaKnown RBP22.08■■□□□ 1.13
CAPN1-226ENST00000533820 SPEF2Q9C093 1822 aa22.08■■□□□ 1.13
CAPN1-226ENST00000533820 MMP14P50281 582 aa22.08■■□□□ 1.13
CAPN1-226ENST00000533820 MDM2Q00987 491 aaPredicted RBP22.08■■□□□ 1.13
CAPN1-226ENST00000533820 TMCO3Q6UWJ1 677 aa22.08■■□□□ 1.13
CAPN1-226ENST00000533820 SGMS1Q86VZ5 419 aa22.08■■□□□ 1.13
CAPN1-226ENST00000533820 MED15Q96RN5 788 aa22.08■■□□□ 1.13
CAPN1-226ENST00000533820 FBXO2Q9UK22 296 aaPredicted RBP22.08■■□□□ 1.13
CAPN1-226ENST00000533820 A0A0U1RQJ8 604 aa22.08■■□□□ 1.12
CAPN1-226ENST00000533820 SDR42E1Q8WUS8 393 aa22.08■■□□□ 1.12
CAPN1-226ENST00000533820 ATRIPQ8WXE1 791 aa22.08■■□□□ 1.12
CAPN1-226ENST00000533820 CSRNP2Q9H175 543 aa22.08■■□□□ 1.12
CAPN1-226ENST00000533820 LZTFL1Q9NQ48 299 aa22.08■■□□□ 1.12
CAPN1-226ENST00000533820 PHLPP2Q6ZVD8 1323 aa22.07■■□□□ 1.12
CAPN1-226ENST00000533820 AKAP11Q9UKA4 1901 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms