RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 CRACR2BQ8N4Y2 399 aaPredicted RBP17.46■□□□□ 0.39
SF3B2-214ENST00000533595 TRIM34Q9BYJ4 488 aa17.46■□□□□ 0.39
SF3B2-214ENST00000533595 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.46■□□□□ 0.39
SF3B2-214ENST00000533595 ZNF112Q9UJU3 913 aa17.46■□□□□ 0.39
SF3B2-214ENST00000533595 BAZ2AQ9UIF9 1905 aaKnown RBP17.45■□□□□ 0.38
SF3B2-214ENST00000533595 FAM196BA6NMK8 535 aa17.45■□□□□ 0.38
SF3B2-214ENST00000533595 USP17L12C9JPN9 530 aa17.45■□□□□ 0.38
SF3B2-214ENST00000533595 USP17L21D6R901 530 aa17.45■□□□□ 0.38
SF3B2-214ENST00000533595 CHMLP26374 656 aa17.45■□□□□ 0.38
SF3B2-214ENST00000533595 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.45■□□□□ 0.38
SF3B2-214ENST00000533595 ZNF589Q86UQ0 364 aaPredicted RBP17.45■□□□□ 0.38
SF3B2-214ENST00000533595 METTL16Q86W50 562 aaKnown RBP17.45■□□□□ 0.38
SF3B2-214ENST00000533595 SLC10A4Q96EP9 437 aa17.45■□□□□ 0.38
SF3B2-214ENST00000533595 CLMNQ96JQ2 1002 aa17.45■□□□□ 0.38
SF3B2-214ENST00000533595 NACAP1Q9BZK3 213 aa17.45■□□□□ 0.38
SF3B2-214ENST00000533595 EHD4Q9H223 541 aa17.45■□□□□ 0.38
SF3B2-214ENST00000533595 SERPINB13Q9UIV8 391 aa17.45■□□□□ 0.38
SF3B2-214ENST00000533595 CSADQ9Y600 493 aa17.45■□□□□ 0.38
SF3B2-214ENST00000533595 CCDC171Q6TFL3 1326 aa17.45■□□□□ 0.38
SF3B2-214ENST00000533595 PHF20L1A8MW92 1017 aa17.44■□□□□ 0.38
SF3B2-214ENST00000533595 ECE1P42892 770 aa17.44■□□□□ 0.38
SF3B2-214ENST00000533595 TDO2P48775 406 aa17.44■□□□□ 0.38
SF3B2-214ENST00000533595 PLCD1P51178 756 aa17.44■□□□□ 0.38
SF3B2-214ENST00000533595 CYP4F22Q6NT55 531 aa17.44■□□□□ 0.38
SF3B2-214ENST00000533595 CTR9Q6PD62 1173 aa17.44■□□□□ 0.38
SF3B2-214ENST00000533595 IFNL3Q8IZI9 196 aa17.44■□□□□ 0.38
SF3B2-214ENST00000533595 RUFY2Q8WXA3 655 aa17.44■□□□□ 0.38
SF3B2-214ENST00000533595 CCDC102AQ96A19 550 aa17.44■□□□□ 0.38
SF3B2-214ENST00000533595 CAPNS2Q96L46 248 aa17.44■□□□□ 0.38
SF3B2-214ENST00000533595 EPB41L4AQ9HCS5 686 aaPredicted RBP17.44■□□□□ 0.38
SF3B2-214ENST00000533595 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.44■□□□□ 0.38
SF3B2-214ENST00000533595 ARPP21Q9UBL0 812 aaPredicted RBP17.44■□□□□ 0.38
SF3B2-214ENST00000533595 SIPA1L1O43166 1804 aa17.44■□□□□ 0.38
SF3B2-214ENST00000533595 OTOFQ9HC10 1997 aa17.43■□□□□ 0.38
SF3B2-214ENST00000533595 CYP2D6P10635 497 aa17.43■□□□□ 0.38
SF3B2-214ENST00000533595 INPP5BP32019 993 aa17.43■□□□□ 0.38
SF3B2-214ENST00000533595 VEGFBP49765 207 aa17.43■□□□□ 0.38
SF3B2-214ENST00000533595 GRM1Q13255 1194 aa17.43■□□□□ 0.38
SF3B2-214ENST00000533595 VGLL4Q14135 290 aa17.43■□□□□ 0.38
SF3B2-214ENST00000533595 C12orf60Q5U649 245 aa17.43■□□□□ 0.38
SF3B2-214ENST00000533595 VPS53Q5VIR6 699 aa17.43■□□□□ 0.38
SF3B2-214ENST00000533595 DNAJC5GQ8N7S2 189 aa17.43■□□□□ 0.38
SF3B2-214ENST00000533595 ZKSCAN4Q969J2 545 aaPredicted RBP17.43■□□□□ 0.38
SF3B2-214ENST00000533595 DNAJC18Q9H819 358 aa17.43■□□□□ 0.38
SF3B2-214ENST00000533595 CYP2D7A0A087X1C5 515 aa17.42■□□□□ 0.38
SF3B2-214ENST00000533595 FOXP2O15409 715 aa17.42■□□□□ 0.38
SF3B2-214ENST00000533595 EVX2Q03828 476 aa17.42■□□□□ 0.38
SF3B2-214ENST00000533595 SBK1Q52WX2 424 aa17.42■□□□□ 0.38
SF3B2-214ENST00000533595 NAPBQ9H115 298 aa17.42■□□□□ 0.38
SF3B2-214ENST00000533595 ELP3Q9H9T3 547 aa17.42■□□□□ 0.38
SF3B2-214ENST00000533595 TAOK2Q9UL54 1235 aa17.42■□□□□ 0.38
SF3B2-214ENST00000533595 RAD50Q92878 1312 aa17.42■□□□□ 0.38
SF3B2-214ENST00000533595 WDR33Q9C0J8 1336 aaKnown RBP17.42■□□□□ 0.38
SF3B2-214ENST00000533595 CTNND1O60716 968 aaKnown RBP17.41■□□□□ 0.38
SF3B2-214ENST00000533595 SLC10A3P09131 477 aa17.41■□□□□ 0.38
SF3B2-214ENST00000533595 HSPD1P10809 573 aaKnown RBP17.41■□□□□ 0.38
SF3B2-214ENST00000533595 GABPAQ06546 454 aa17.41■□□□□ 0.38
SF3B2-214ENST00000533595 NOL9Q5SY16 702 aaKnown RBP17.41■□□□□ 0.38
SF3B2-214ENST00000533595 RASAL3Q86YV0 1011 aa17.41■□□□□ 0.38
SF3B2-214ENST00000533595 SNCAIPQ9Y6H5 919 aa17.41■□□□□ 0.38
SF3B2-214ENST00000533595 PCNTO95613 3336 aa17.4■□□□□ 0.38
SF3B2-214ENST00000533595 MINDY4BA8MYZ0 360 aa17.4■□□□□ 0.38
SF3B2-214ENST00000533595 FAM155AB1AL88 458 aaPredicted RBP17.4■□□□□ 0.38
SF3B2-214ENST00000533595 ALX1Q15699 326 aa17.4■□□□□ 0.38
SF3B2-214ENST00000533595 SCYL3Q8IZE3 742 aa17.4■□□□□ 0.38
SF3B2-214ENST00000533595 SWAP70Q9UH65 585 aa17.4■□□□□ 0.38
SF3B2-214ENST00000533595 CAP2P40123 477 aa17.39■□□□□ 0.37
SF3B2-214ENST00000533595 NOGQ13253 232 aa17.39■□□□□ 0.37
SF3B2-214ENST00000533595 TATDN1Q6P1N9 297 aa17.39■□□□□ 0.37
SF3B2-214ENST00000533595 ERO1BQ86YB8 467 aa17.39■□□□□ 0.37
SF3B2-214ENST00000533595 OPTNQ96CV9 577 aa17.39■□□□□ 0.37
SF3B2-214ENST00000533595 DYNLL2Q96FJ2 89 aa17.39■□□□□ 0.37
SF3B2-214ENST00000533595 WNK4Q96J92 1243 aa17.39■□□□□ 0.37
SF3B2-214ENST00000533595 IL25Q9H293 177 aa17.39■□□□□ 0.37
SF3B2-214ENST00000533595 PICK1Q9NRD5 415 aa17.39■□□□□ 0.37
SF3B2-214ENST00000533595 SPDYE5A6NIY4 337 aa17.38■□□□□ 0.37
SF3B2-214ENST00000533595 SMIM22K7EJ46 135 aa17.38■□□□□ 0.37
SF3B2-214ENST00000533595 SGSM2O43147 1006 aa17.38■□□□□ 0.37
SF3B2-214ENST00000533595 AOC2O75106 756 aa17.38■□□□□ 0.37
SF3B2-214ENST00000533595 CDC45O75419 566 aa17.38■□□□□ 0.37
SF3B2-214ENST00000533595 FGAP02671 866 aa17.38■□□□□ 0.37
SF3B2-214ENST00000533595 ZBTB48P10074 688 aaPredicted RBP17.38■□□□□ 0.37
SF3B2-214ENST00000533595 SHMT1P34896 483 aa17.38■□□□□ 0.37
SF3B2-214ENST00000533595 RRP1BQ14684 758 aaKnown RBP17.38■□□□□ 0.37
SF3B2-214ENST00000533595 SPRYD7Q5W111 196 aa17.38■□□□□ 0.37
SF3B2-214ENST00000533595 CASC1Q6TDU7 716 aa17.38■□□□□ 0.37
SF3B2-214ENST00000533595 C16orf86Q6ZW13 317 aa17.38■□□□□ 0.37
SF3B2-214ENST00000533595 DSCC1Q9BVC3 393 aa17.38■□□□□ 0.37
SF3B2-214ENST00000533595 ZMYM6O95789 1325 aa17.38■□□□□ 0.37
SF3B2-214ENST00000533595 MAP2K2P36507 400 aa17.37■□□□□ 0.37
SF3B2-214ENST00000533595 CDK8P49336 464 aa17.37■□□□□ 0.37
SF3B2-214ENST00000533595 PPARAQ07869 468 aa17.37■□□□□ 0.37
SF3B2-214ENST00000533595 MKRN3Q13064 507 aaKnown RBP17.37■□□□□ 0.37
SF3B2-214ENST00000533595 CERKLQ49MI3 558 aaPredicted RBP17.37■□□□□ 0.37
SF3B2-214ENST00000533595 SLC44A5Q8NCS7 719 aa17.37■□□□□ 0.37
SF3B2-214ENST00000533595 CNKSR2Q8WXI2 1034 aa17.37■□□□□ 0.37
SF3B2-214ENST00000533595 OTUD5Q96G74 571 aa17.37■□□□□ 0.37
SF3B2-214ENST00000533595 GINM1Q9NU53 330 aa17.37■□□□□ 0.37
SF3B2-214ENST00000533595 GTF3C3Q9Y5Q9 886 aa17.37■□□□□ 0.37
SF3B2-214ENST00000533595 LAMB1P07942 1786 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms