RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 LACTBP83111 547 aaPredicted RBP28.58■■■□□ 2.17
SMPD1-209ENST00000533196 MAP3K12Q12852 859 aa28.58■■■□□ 2.17
SMPD1-209ENST00000533196 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.58■■■□□ 2.17
SMPD1-209ENST00000533196 PARK7Q99497 189 aaKnown RBP28.58■■■□□ 2.17
SMPD1-209ENST00000533196 SLC45A1Q9Y2W3 748 aa28.58■■■□□ 2.17
SMPD1-209ENST00000533196 CYP7A1P22680 504 aa28.57■■■□□ 2.16
SMPD1-209ENST00000533196 TTF1Q15361 905 aaPredicted RBP28.57■■■□□ 2.16
SMPD1-209ENST00000533196 TGFBRAP1Q8WUH2 860 aa28.57■■■□□ 2.16
SMPD1-209ENST00000533196 SLURP2P0DP57 97 aa28.56■■■□□ 2.16
SMPD1-209ENST00000533196 FLT1P17948 1338 aa28.56■■■□□ 2.16
SMPD1-209ENST00000533196 CAP1Q01518 475 aa28.56■■■□□ 2.16
SMPD1-209ENST00000533196 PDE4DIPQ5VU43 2346 aa28.56■■■□□ 2.16
SMPD1-209ENST00000533196 GPAT2Q6NUI2 795 aa28.56■■■□□ 2.16
SMPD1-209ENST00000533196 FOXP4Q8IVH2 680 aaPredicted RBP28.56■■■□□ 2.16
SMPD1-209ENST00000533196 ADGRA2Q96PE1 1338 aa28.56■■■□□ 2.16
SMPD1-209ENST00000533196 SIPA1L1O43166 1804 aa28.55■■■□□ 2.16
SMPD1-209ENST00000533196 IFIT2P09913 472 aaKnown RBP28.55■■■□□ 2.16
SMPD1-209ENST00000533196 CAP2P40123 477 aa28.55■■■□□ 2.16
SMPD1-209ENST00000533196 PRMT2P55345 433 aa28.55■■■□□ 2.16
SMPD1-209ENST00000533196 ARMC5Q96C12 935 aa28.55■■■□□ 2.16
SMPD1-209ENST00000533196 FAM196BA6NMK8 535 aa28.54■■■□□ 2.16
SMPD1-209ENST00000533196 METTL16Q86W50 562 aaKnown RBP28.54■■■□□ 2.16
SMPD1-209ENST00000533196 MAPKAPK5Q8IW41 473 aa28.54■■■□□ 2.16
SMPD1-209ENST00000533196 MAGEB6Q8N7X4 407 aa28.54■■■□□ 2.16
SMPD1-209ENST00000533196 KIAA0100Q14667 2235 aaKnown RBP28.54■■■□□ 2.16
SMPD1-209ENST00000533196 MYH1P12882 1939 aa28.53■■■□□ 2.16
SMPD1-209ENST00000533196 ANTXR1Q9H6X2 564 aa28.53■■■□□ 2.16
SMPD1-209ENST00000533196 GINM1Q9NU53 330 aa28.53■■■□□ 2.16
SMPD1-209ENST00000533196 CPA4Q9UI42 421 aa28.53■■■□□ 2.16
SMPD1-209ENST00000533196 GADL1Q6ZQY3 521 aa28.52■■■□□ 2.16
SMPD1-209ENST00000533196 RBBP6Q7Z6E9 1792 aaKnown RBP28.52■■■□□ 2.16
SMPD1-209ENST00000533196 TRIM75PA6NK02 468 aa28.51■■■□□ 2.15
SMPD1-209ENST00000533196 APBB1O00213 710 aa28.51■■■□□ 2.15
SMPD1-209ENST00000533196 HLA-DOAP06340 250 aa28.51■■■□□ 2.15
SMPD1-209ENST00000533196 DYNLL1P63167 89 aaKnown RBP28.51■■■□□ 2.15
SMPD1-209ENST00000533196 C20orf194Q5TEA3 1177 aa28.51■■■□□ 2.15
SMPD1-209ENST00000533196 PROCA1Q8NCQ7 364 aaPredicted RBP28.51■■■□□ 2.15
SMPD1-209ENST00000533196 AS3MTQ9HBK9 375 aa28.51■■■□□ 2.15
SMPD1-209ENST00000533196 NDUFB9Q9Y6M9 179 aa28.51■■■□□ 2.15
SMPD1-209ENST00000533196 BCRP11274 1271 aa28.5■■■□□ 2.15
SMPD1-209ENST00000533196 NBPF11Q86T75 865 aa28.5■■■□□ 2.15
SMPD1-209ENST00000533196 ZNF280CQ8ND82 737 aa28.5■■■□□ 2.15
SMPD1-209ENST00000533196 TRIM34Q9BYJ4 488 aa28.5■■■□□ 2.15
SMPD1-209ENST00000533196 HTTP42858 3142 aa28.49■■■□□ 2.15
SMPD1-209ENST00000533196 USP17L5A8MUK1 530 aa28.49■■■□□ 2.15
SMPD1-209ENST00000533196 ASNSP08243 561 aa28.49■■■□□ 2.15
SMPD1-209ENST00000533196 HOXD10P28358 340 aa28.49■■■□□ 2.15
SMPD1-209ENST00000533196 CRACR2BQ8N4Y2 399 aaPredicted RBP28.49■■■□□ 2.15
SMPD1-209ENST00000533196 ARHGAP39Q9C0H5 1083 aa28.49■■■□□ 2.15
SMPD1-209ENST00000533196 AGTPBP1Q9UPW5 1226 aa28.49■■■□□ 2.15
SMPD1-209ENST00000533196 PTCH2Q9Y6C5 1203 aa28.49■■■□□ 2.15
SMPD1-209ENST00000533196 ZSWIM8A7E2V4 1837 aa28.48■■■□□ 2.15
SMPD1-209ENST00000533196 LOC285556D6RIA3 1793 aa28.48■■■□□ 2.15
SMPD1-209ENST00000533196 CYP2C8P10632 490 aa28.48■■■□□ 2.15
SMPD1-209ENST00000533196 MIGA1Q8NAN2 632 aa28.48■■■□□ 2.15
SMPD1-209ENST00000533196 PALD1Q9ULE6 856 aa28.48■■■□□ 2.15
SMPD1-209ENST00000533196 MGAMO43451 1857 aa28.47■■■□□ 2.15
SMPD1-209ENST00000533196 PSMC4P43686 418 aa28.47■■■□□ 2.15
SMPD1-209ENST00000533196 USP5P45974 858 aa28.47■■■□□ 2.15
SMPD1-209ENST00000533196 SPP2Q13103 211 aa28.47■■■□□ 2.15
SMPD1-209ENST00000533196 RRP1BQ14684 758 aaKnown RBP28.47■■■□□ 2.15
SMPD1-209ENST00000533196 SLC9C1Q4G0N8 1177 aa28.47■■■□□ 2.15
SMPD1-209ENST00000533196 WDR18Q9BV38 432 aa28.47■■■□□ 2.15
SMPD1-209ENST00000533196 DNAJC18Q9H819 358 aa28.47■■■□□ 2.15
SMPD1-209ENST00000533196 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.47■■■□□ 2.15
SMPD1-209ENST00000533196 PNMA3Q9UL41 463 aa28.47■■■□□ 2.15
SMPD1-209ENST00000533196 CCDC84Q86UT8 332 aaPredicted RBP28.46■■■□□ 2.15
SMPD1-209ENST00000533196 ZNF333Q96JL9 665 aa28.46■■■□□ 2.15
SMPD1-209ENST00000533196 LRRCC1Q9C099 1032 aa28.46■■■□□ 2.15
SMPD1-209ENST00000533196 ATP5JP18859 108 aa28.45■■■□□ 2.14
SMPD1-209ENST00000533196 PABPC4Q13310 644 aaKnown RBP eCLIP28.45■■■□□ 2.14
SMPD1-209ENST00000533196 SH3D19Q5HYK7 790 aa28.45■■■□□ 2.14
SMPD1-209ENST00000533196 SLC9C2Q5TAH2 1124 aa28.45■■■□□ 2.14
SMPD1-209ENST00000533196 DNAJC2Q99543 621 aaKnown RBP28.45■■■□□ 2.14
SMPD1-209ENST00000533196 RIOK1Q9BRS2 568 aaKnown RBP28.45■■■□□ 2.14
SMPD1-209ENST00000533196 EHD4Q9H223 541 aa28.45■■■□□ 2.14
SMPD1-209ENST00000533196 SRRDQ9UH36 339 aa28.45■■■□□ 2.14
SMPD1-209ENST00000533196 PDE6AP16499 860 aa28.44■■■□□ 2.14
SMPD1-209ENST00000533196 TTC6Q86TZ1 520 aa28.44■■■□□ 2.14
SMPD1-209ENST00000533196 SMCR8Q8TEV9 937 aaPredicted RBP28.44■■■□□ 2.14
SMPD1-209ENST00000533196 TRIM47Q96LD4 638 aa28.44■■■□□ 2.14
SMPD1-209ENST00000533196 SAP30BPQ9UHR5 308 aaKnown RBP28.44■■■□□ 2.14
SMPD1-209ENST00000533196 MAGEB6P1A0A0J9YX57 407 aa28.43■■■□□ 2.14
SMPD1-209ENST00000533196 GOLIM4O00461 696 aa28.43■■■□□ 2.14
SMPD1-209ENST00000533196 FMNL1O95466 1100 aaPredicted RBP28.43■■■□□ 2.14
SMPD1-209ENST00000533196 FCGRTP55899 365 aa28.43■■■□□ 2.14
SMPD1-209ENST00000533196 TMEM106CQ9BVX2 250 aa28.43■■■□□ 2.14
SMPD1-209ENST00000533196 OSBPP22059 807 aa28.42■■■□□ 2.14
SMPD1-209ENST00000533196 CTGFP29279 349 aa28.42■■■□□ 2.14
SMPD1-209ENST00000533196 PAG1Q9NWQ8 432 aa28.42■■■□□ 2.14
SMPD1-209ENST00000533196 SERPINB13Q9UIV8 391 aa28.42■■■□□ 2.14
SMPD1-209ENST00000533196 C19orf81C9J6K1 198 aa28.41■■■□□ 2.14
SMPD1-209ENST00000533196 HMGCS2P54868 508 aa28.41■■■□□ 2.14
SMPD1-209ENST00000533196 TREML2Q5T2D2 321 aa28.41■■■□□ 2.14
SMPD1-209ENST00000533196 CRNKL1Q9BZJ0 848 aaKnown RBP28.41■■■□□ 2.14
SMPD1-209ENST00000533196 ZBTB21Q9ULJ3 1066 aa28.41■■■□□ 2.14
SMPD1-209ENST00000533196 ZNF532Q9HCE3 1301 aa28.41■■■□□ 2.14
SMPD1-209ENST00000533196 MYH7P12883 1935 aa28.4■■■□□ 2.14
SMPD1-209ENST00000533196 BACE1P56817 501 aa28.4■■■□□ 2.14
SMPD1-209ENST00000533196 TATDN1Q6P1N9 297 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms