RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 METTL16Q86W50 562 aaKnown RBP13.41□□□□□ -0.26
TRAPPC4-211ENST00000533012 KLRG1Q96E93 195 aa13.41□□□□□ -0.26
TRAPPC4-211ENST00000533012 ESYT1Q9BSJ8 1104 aa13.41□□□□□ -0.26
TRAPPC4-211ENST00000533012 DSCC1Q9BVC3 393 aa13.41□□□□□ -0.26
TRAPPC4-211ENST00000533012 EHD4Q9H223 541 aa13.41□□□□□ -0.26
TRAPPC4-211ENST00000533012 EPB41L4AQ9HCS5 686 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC4-211ENST00000533012 FZD1Q9UP38 647 aa13.41□□□□□ -0.26
TRAPPC4-211ENST00000533012 TLL2Q9Y6L7 1015 aa13.41□□□□□ -0.26
TRAPPC4-211ENST00000533012 SLC3A2P08195 630 aaKnown RBP13.4□□□□□ -0.26
TRAPPC4-211ENST00000533012 CYP2D6P10635 497 aa13.4□□□□□ -0.26
TRAPPC4-211ENST00000533012 LDLRAD1Q5T700 205 aa13.4□□□□□ -0.26
TRAPPC4-211ENST00000533012 SAPCD2Q86UD0 394 aa13.4□□□□□ -0.26
TRAPPC4-211ENST00000533012 ANKRD13AQ8IZ07 590 aa13.4□□□□□ -0.26
TRAPPC4-211ENST00000533012 WRNIP1Q96S55 665 aa13.4□□□□□ -0.26
TRAPPC4-211ENST00000533012 CTNNA3Q9UI47 895 aa13.4□□□□□ -0.26
TRAPPC4-211ENST00000533012 ZNF112Q9UJU3 913 aa13.4□□□□□ -0.26
TRAPPC4-211ENST00000533012 TAOK2Q9UL54 1235 aa13.4□□□□□ -0.26
TRAPPC4-211ENST00000533012 ECM29Q5VYK3 1845 aa13.4□□□□□ -0.26
TRAPPC4-211ENST00000533012 POLR2AP24928 1970 aaKnown RBP13.4□□□□□ -0.27
TRAPPC4-211ENST00000533012 CYP2D7A0A087X1C5 515 aa13.39□□□□□ -0.27
TRAPPC4-211ENST00000533012 FOXP2O15409 715 aa13.39□□□□□ -0.27
TRAPPC4-211ENST00000533012 SLURP2P0DP57 97 aa13.39□□□□□ -0.27
TRAPPC4-211ENST00000533012 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.39□□□□□ -0.27
TRAPPC4-211ENST00000533012 SLC10A4Q96EP9 437 aa13.39□□□□□ -0.27
TRAPPC4-211ENST00000533012 IL25Q9H293 177 aa13.39□□□□□ -0.27
TRAPPC4-211ENST00000533012 SWAP70Q9UH65 585 aa13.39□□□□□ -0.27
TRAPPC4-211ENST00000533012 CSADQ9Y600 493 aa13.39□□□□□ -0.27
TRAPPC4-211ENST00000533012 SSC5DA1L4H1 1573 aa13.38□□□□□ -0.27
TRAPPC4-211ENST00000533012 FAM196BA6NMK8 535 aa13.38□□□□□ -0.27
TRAPPC4-211ENST00000533012 PHF20L1A8MW92 1017 aa13.38□□□□□ -0.27
TRAPPC4-211ENST00000533012 ZNF213O14771 459 aa13.38□□□□□ -0.27
TRAPPC4-211ENST00000533012 CTNND1O60716 968 aaKnown RBP13.38□□□□□ -0.27
TRAPPC4-211ENST00000533012 GABPAQ06546 454 aa13.38□□□□□ -0.27
TRAPPC4-211ENST00000533012 PPARAQ07869 468 aa13.38□□□□□ -0.27
TRAPPC4-211ENST00000533012 DEFB115Q30KQ5 88 aa13.38□□□□□ -0.27
TRAPPC4-211ENST00000533012 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC4-211ENST00000533012 ZKSCAN4Q969J2 545 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC4-211ENST00000533012 DYNLL2Q96FJ2 89 aa13.38□□□□□ -0.27
TRAPPC4-211ENST00000533012 HHIPL1Q96JK4 782 aa13.38□□□□□ -0.27
TRAPPC4-211ENST00000533012 ZNF287Q9HBT7 754 aa13.38□□□□□ -0.27
TRAPPC4-211ENST00000533012 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC4-211ENST00000533012 MYH7P12883 1935 aa13.38□□□□□ -0.27
TRAPPC4-211ENST00000533012 INPP5BP32019 993 aa13.37□□□□□ -0.27
TRAPPC4-211ENST00000533012 CDK8P49336 464 aa13.37□□□□□ -0.27
TRAPPC4-211ENST00000533012 ZNF157P51786 506 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC4-211ENST00000533012 PTH1RQ03431 593 aa13.37□□□□□ -0.27
TRAPPC4-211ENST00000533012 PDE4BQ07343 736 aa13.37□□□□□ -0.27
TRAPPC4-211ENST00000533012 IMMTQ16891 758 aaKnown RBP13.37□□□□□ -0.27
TRAPPC4-211ENST00000533012 CERKLQ49MI3 558 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC4-211ENST00000533012 RGMBQ6NW40 437 aa13.37□□□□□ -0.27
TRAPPC4-211ENST00000533012 TATDN1Q6P1N9 297 aa13.37□□□□□ -0.27
TRAPPC4-211ENST00000533012 C16orf86Q6ZW13 317 aa13.37□□□□□ -0.27
TRAPPC4-211ENST00000533012 STK11IPQ8N1F8 1099 aa13.37□□□□□ -0.27
TRAPPC4-211ENST00000533012 MAP4K1Q92918 833 aa13.37□□□□□ -0.27
TRAPPC4-211ENST00000533012 CCDC102AQ96A19 550 aa13.37□□□□□ -0.27
TRAPPC4-211ENST00000533012 MKNK2Q9HBH9 465 aa13.37□□□□□ -0.27
TRAPPC4-211ENST00000533012 ANO2Q9NQ90 1003 aa13.37□□□□□ -0.27
TRAPPC4-211ENST00000533012 ANAPC4Q9UJX5 808 aa13.37□□□□□ -0.27
TRAPPC4-211ENST00000533012 U3KPZ7 1027 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC4-211ENST00000533012 ZMYM6O95789 1325 aa13.37□□□□□ -0.27
TRAPPC4-211ENST00000533012 RASSF10A6NK89 507 aa13.36□□□□□ -0.27
TRAPPC4-211ENST00000533012 SMIM22K7EJ46 135 aa13.36□□□□□ -0.27
TRAPPC4-211ENST00000533012 EIF5BO60841 1220 aaKnown RBP13.36□□□□□ -0.27
TRAPPC4-211ENST00000533012 SHMT1P34896 483 aa13.36□□□□□ -0.27
TRAPPC4-211ENST00000533012 CAP2P40123 477 aa13.36□□□□□ -0.27
TRAPPC4-211ENST00000533012 HTRA3P83110 453 aa13.36□□□□□ -0.27
TRAPPC4-211ENST00000533012 EVX2Q03828 476 aa13.36□□□□□ -0.27
TRAPPC4-211ENST00000533012 VGLL4Q14135 290 aa13.36□□□□□ -0.27
TRAPPC4-211ENST00000533012 PAXIP1Q6ZW49 1069 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC4-211ENST00000533012 ZNF444Q8N0Y2 327 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC4-211ENST00000533012 DNAJC18Q9H819 358 aa13.36□□□□□ -0.27
TRAPPC4-211ENST00000533012 PICK1Q9NRD5 415 aa13.36□□□□□ -0.27
TRAPPC4-211ENST00000533012 REC8O95072 547 aa13.35□□□□□ -0.27
TRAPPC4-211ENST00000533012 ECE1P42892 770 aa13.35□□□□□ -0.27
TRAPPC4-211ENST00000533012 CTDSPL2Q05D32 466 aa13.35□□□□□ -0.27
TRAPPC4-211ENST00000533012 RRP1BQ14684 758 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-211ENST00000533012 NOL9Q5SY16 702 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-211ENST00000533012 SCYL3Q8IZE3 742 aa13.35□□□□□ -0.27
TRAPPC4-211ENST00000533012 SLC44A5Q8NCS7 719 aa13.35□□□□□ -0.27
TRAPPC4-211ENST00000533012 CLMNQ96JQ2 1002 aa13.35□□□□□ -0.27
TRAPPC4-211ENST00000533012 CCDC17Q96LX7 622 aa13.35□□□□□ -0.27
TRAPPC4-211ENST00000533012 LSG1Q9H089 658 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-211ENST00000533012 ELP3Q9H9T3 547 aa13.35□□□□□ -0.27
TRAPPC4-211ENST00000533012 CABP5Q9NP86 173 aa13.35□□□□□ -0.27
TRAPPC4-211ENST00000533012 GINM1Q9NU53 330 aa13.35□□□□□ -0.27
TRAPPC4-211ENST00000533012 ASNSP08243 561 aa13.34□□□□□ -0.27
TRAPPC4-211ENST00000533012 PCP11498 1178 aaKnown RBP13.34□□□□□ -0.27
TRAPPC4-211ENST00000533012 HAND2P61296 217 aa13.34□□□□□ -0.27
TRAPPC4-211ENST00000533012 ABCB5Q2M3G0 1257 aa13.34□□□□□ -0.27
TRAPPC4-211ENST00000533012 MFSD6Q6ZSS7 791 aa13.34□□□□□ -0.27
TRAPPC4-211ENST00000533012 ERO1BQ86YB8 467 aa13.34□□□□□ -0.27
TRAPPC4-211ENST00000533012 RNF41Q9H4P4 317 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC4-211ENST00000533012 RBM8AQ9Y5S9 174 aaKnown RBP13.34□□□□□ -0.27
TRAPPC4-211ENST00000533012 SNCAIPQ9Y6H5 919 aa13.34□□□□□ -0.27
TRAPPC4-211ENST00000533012 PAPPA2Q9BXP8 1791 aa13.34□□□□□ -0.27
TRAPPC4-211ENST00000533012 AK9Q5TCS8 1911 aa13.33□□□□□ -0.28
TRAPPC4-211ENST00000533012 MPHOSPH10O00566 681 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-211ENST00000533012 GDF11O95390 407 aa13.33□□□□□ -0.28
TRAPPC4-211ENST00000533012 PPATQ06203 517 aa13.33□□□□□ -0.28
TRAPPC4-211ENST00000533012 GRM1Q13255 1194 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms