RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 GBP3Q9H0R5 595 aa20.26■□□□□ 0.83
LTBP3-210ENST00000528516 FAM204AQ9H8W3 233 aa20.26■□□□□ 0.83
LTBP3-210ENST00000528516 OVOS2A0A0J9YW53 1432 aa20.26■□□□□ 0.83
LTBP3-210ENST00000528516 OVOS2Q6IE36 1432 aa20.26■□□□□ 0.83
LTBP3-210ENST00000528516 CCDC194A0A1B0GVG4 234 aa20.26■□□□□ 0.83
LTBP3-210ENST00000528516 PLBD2Q8NHP8 589 aa20.26■□□□□ 0.83
LTBP3-210ENST00000528516 AIFM3Q96NN9 605 aa20.26■□□□□ 0.83
LTBP3-210ENST00000528516 AXIN2Q9Y2T1 843 aa20.26■□□□□ 0.83
LTBP3-210ENST00000528516 SETD1AO15047 1707 aaKnown RBP20.26■□□□□ 0.83
LTBP3-210ENST00000528516 ABCB6Q9NP58 842 aa20.26■□□□□ 0.83
LTBP3-210ENST00000528516 VWA3AA6NCI4 1184 aa20.25■□□□□ 0.83
LTBP3-210ENST00000528516 IL2RBP14784 551 aa20.25■□□□□ 0.83
LTBP3-210ENST00000528516 STIM1Q13586 685 aa20.25■□□□□ 0.83
LTBP3-210ENST00000528516 NAA16Q6N069 864 aaPredicted RBP20.25■□□□□ 0.83
LTBP3-210ENST00000528516 SYNE4Q8N205 404 aa20.25■□□□□ 0.83
LTBP3-210ENST00000528516 PSD3Q9NYI0 1048 aa20.25■□□□□ 0.83
LTBP3-210ENST00000528516 MRFAP1Q9Y605 127 aa20.25■□□□□ 0.83
LTBP3-210ENST00000528516 POTEB2H3BUK9 544 aa20.25■□□□□ 0.83
LTBP3-210ENST00000528516 CCT6AP40227 531 aaKnown RBP20.25■□□□□ 0.83
LTBP3-210ENST00000528516 ZNF174Q15697 407 aa20.25■□□□□ 0.83
LTBP3-210ENST00000528516 GDAP1L1Q96MZ0 367 aa20.25■□□□□ 0.83
LTBP3-210ENST00000528516 CLIC6Q96NY7 704 aa20.25■□□□□ 0.83
LTBP3-210ENST00000528516 UBA5Q9GZZ9 404 aa20.25■□□□□ 0.83
LTBP3-210ENST00000528516 TCEAL9Q9UHQ7 104 aa20.25■□□□□ 0.83
LTBP3-210ENST00000528516 KIF20BQ96Q89 1820 aa20.25■□□□□ 0.83
LTBP3-210ENST00000528516 ADALQ6DHV7 355 aa20.25■□□□□ 0.83
LTBP3-210ENST00000528516 TOGARAM2Q6ZUX3 1019 aa20.25■□□□□ 0.83
LTBP3-210ENST00000528516 FMR1NBQ8N0W7 255 aaPredicted RBP20.25■□□□□ 0.83
LTBP3-210ENST00000528516 KCND1Q9NSA2 647 aa20.25■□□□□ 0.83
LTBP3-210ENST00000528516 HSPD1P10809 573 aaKnown RBP20.24■□□□□ 0.83
LTBP3-210ENST00000528516 MAP2K2P36507 400 aa20.24■□□□□ 0.83
LTBP3-210ENST00000528516 UBA7P41226 1012 aa20.24■□□□□ 0.83
LTBP3-210ENST00000528516 ZFYVE27Q5T4F4 411 aa20.24■□□□□ 0.83
LTBP3-210ENST00000528516 FANCLQ9NW38 375 aa20.24■□□□□ 0.83
LTBP3-210ENST00000528516 CLIC4Q9Y696 253 aa20.24■□□□□ 0.83
LTBP3-210ENST00000528516 MAP3K9P80192 1104 aa20.24■□□□□ 0.83
LTBP3-210ENST00000528516 RRAGBQ5VZM2 374 aa20.24■□□□□ 0.83
LTBP3-210ENST00000528516 CEP112Q8N8E3 955 aa20.24■□□□□ 0.83
LTBP3-210ENST00000528516 BTG4Q9NY30 223 aa20.24■□□□□ 0.83
LTBP3-210ENST00000528516 POLR2DO15514 142 aaKnown RBP20.24■□□□□ 0.83
LTBP3-210ENST00000528516 CCDC175P0C221 793 aa20.24■□□□□ 0.83
LTBP3-210ENST00000528516 CCDC181Q5TID7 509 aa20.24■□□□□ 0.83
LTBP3-210ENST00000528516 ZNF444Q8N0Y2 327 aaPredicted RBP20.24■□□□□ 0.83
LTBP3-210ENST00000528516 ENGASEQ8NFI3 743 aa20.24■□□□□ 0.83
LTBP3-210ENST00000528516 CCDC43Q96MW1 224 aaKnown RBP20.24■□□□□ 0.83
LTBP3-210ENST00000528516 PLEKHG2Q9H7P9 1386 aa20.24■□□□□ 0.83
LTBP3-210ENST00000528516 MYCNP04198 464 aaPredicted RBP20.23■□□□□ 0.83
LTBP3-210ENST00000528516 ERLIN2O94905 339 aa20.23■□□□□ 0.83
LTBP3-210ENST00000528516 FGAP02671 866 aa20.23■□□□□ 0.83
LTBP3-210ENST00000528516 MCM7P33993 719 aa20.23■□□□□ 0.83
LTBP3-210ENST00000528516 IFIT1BQ5T764 474 aaKnown RBP20.23■□□□□ 0.83
LTBP3-210ENST00000528516 NSUN7Q8NE18 718 aaKnown RBP20.23■□□□□ 0.83
LTBP3-210ENST00000528516 PPP1R1BQ9UD71 204 aaPredicted RBP20.23■□□□□ 0.83
LTBP3-210ENST00000528516 CTAGE15A4D2H0 777 aa20.23■□□□□ 0.83
LTBP3-210ENST00000528516 ZFYP08048 801 aaPredicted RBP20.23■□□□□ 0.83
LTBP3-210ENST00000528516 CTAGE8P0CG41 777 aa20.23■□□□□ 0.83
LTBP3-210ENST00000528516 ATP5JP18859 108 aa20.23■□□□□ 0.83
LTBP3-210ENST00000528516 USP8P40818 1118 aa20.23■□□□□ 0.83
LTBP3-210ENST00000528516 KCNJ6P48051 423 aa20.23■□□□□ 0.83
LTBP3-210ENST00000528516 CTAGE6Q86UF2 777 aa20.23■□□□□ 0.83
LTBP3-210ENST00000528516 CTAGE4Q8IX94 777 aa20.23■□□□□ 0.83
LTBP3-210ENST00000528516 AFAP1L1Q8TED9 768 aa20.23■□□□□ 0.83
LTBP3-210ENST00000528516 HINFPQ9BQA5 517 aa20.23■□□□□ 0.83
LTBP3-210ENST00000528516 SEPT11Q9NVA2 429 aaKnown RBP20.23■□□□□ 0.83
LTBP3-210ENST00000528516 C6orf229H3BNL8 230 aa20.22■□□□□ 0.83
LTBP3-210ENST00000528516 SRGAP1Q7Z6B7 1085 aa20.22■□□□□ 0.83
LTBP3-210ENST00000528516 CEP131Q9UPN4 1083 aa20.22■□□□□ 0.83
LTBP3-210ENST00000528516 ANO1Q5XXA6 986 aa20.22■□□□□ 0.83
LTBP3-210ENST00000528516 ZPR1O75312 459 aa20.22■□□□□ 0.83
LTBP3-210ENST00000528516 TTF1Q15361 905 aaPredicted RBP20.21■□□□□ 0.83
LTBP3-210ENST00000528516 MCTP2Q6DN12 878 aa20.21■□□□□ 0.83
LTBP3-210ENST00000528516 CRACR2AQ9BSW2 395 aa20.21■□□□□ 0.83
LTBP3-210ENST00000528516 INCENPQ9NQS7 918 aa20.21■□□□□ 0.83
LTBP3-210ENST00000528516 PNOCQ13519 176 aa20.21■□□□□ 0.83
LTBP3-210ENST00000528516 CASP8Q14790 479 aa20.21■□□□□ 0.83
LTBP3-210ENST00000528516 SPTY2D1Q68D10 685 aaPredicted RBP20.21■□□□□ 0.83
LTBP3-210ENST00000528516 MMS22LQ6ZRQ5 1243 aa20.21■□□□□ 0.83
LTBP3-210ENST00000528516 ADGRL3Q9HAR2 1447 aa20.21■□□□□ 0.83
LTBP3-210ENST00000528516 ARHGEF10O15013 1369 aa20.21■□□□□ 0.83
LTBP3-210ENST00000528516 EP400NLQ6ZTU2 488 aa20.21■□□□□ 0.83
LTBP3-210ENST00000528516 DIS3L2Q8IYB7 885 aaKnown RBP20.21■□□□□ 0.83
LTBP3-210ENST00000528516 V9GY48 417 aaPredicted RBP20.21■□□□□ 0.83
LTBP3-210ENST00000528516 ITSN1Q15811 1721 aa20.21■□□□□ 0.83
LTBP3-210ENST00000528516 USP31Q70CQ4 1352 aa20.21■□□□□ 0.83
LTBP3-210ENST00000528516 ZNF335Q9H4Z2 1342 aaPredicted RBP20.21■□□□□ 0.83
LTBP3-210ENST00000528516 CLGNO14967 610 aa20.21■□□□□ 0.83
LTBP3-210ENST00000528516 PHKG2P15735 406 aa20.21■□□□□ 0.83
LTBP3-210ENST00000528516 PFKFB1P16118 471 aa20.21■□□□□ 0.83
LTBP3-210ENST00000528516 KRT40Q6A162 431 aa20.21■□□□□ 0.83
LTBP3-210ENST00000528516 TADA2BQ86TJ2 420 aa20.21■□□□□ 0.83
LTBP3-210ENST00000528516 EFCAB13Q8IY85 973 aa20.21■□□□□ 0.83
LTBP3-210ENST00000528516 ZNF532Q9HCE3 1301 aa20.2■□□□□ 0.82
LTBP3-210ENST00000528516 MTIF2P46199 727 aaKnown RBP20.2■□□□□ 0.82
LTBP3-210ENST00000528516 RNF41Q9H4P4 317 aaPredicted RBP20.2■□□□□ 0.82
LTBP3-210ENST00000528516 ANKARQ7Z5J8 1434 aa20.2■□□□□ 0.82
LTBP3-210ENST00000528516 CTAGE9A4FU28 777 aa20.2■□□□□ 0.82
LTBP3-210ENST00000528516 RDXP35241 583 aaKnown RBP20.2■□□□□ 0.82
LTBP3-210ENST00000528516 TDRD12Q587J7 1177 aaKnown RBP20.2■□□□□ 0.82
LTBP3-210ENST00000528516 VSTM4Q8IW00 320 aa20.2■□□□□ 0.82
LTBP3-210ENST00000528516 ATG3Q9NT62 314 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms