RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 ERVV-1B6SEH8 477 aa5.29□□□□□ -1.56
CHD7-205ENST00000527825 HOXD10P28358 340 aa5.29□□□□□ -1.56
CHD7-205ENST00000527825 GRK4P32298 578 aa5.29□□□□□ -1.56
CHD7-205ENST00000527825 ZNF280AP59817 542 aaPredicted RBP5.29□□□□□ -1.56
CHD7-205ENST00000527825 GRAPQ13588 217 aa5.29□□□□□ -1.56
CHD7-205ENST00000527825 TMEM132AQ24JP5 1023 aa5.29□□□□□ -1.56
CHD7-205ENST00000527825 MRPL14Q6P1L8 145 aaKnown RBP5.29□□□□□ -1.56
CHD7-205ENST00000527825 APOBEC3FQ8IUX4 373 aaKnown RBP5.29□□□□□ -1.56
CHD7-205ENST00000527825 OGFOD1Q8N543 542 aa5.29□□□□□ -1.56
CHD7-205ENST00000527825 GRAPLQ8TC17 118 aaPredicted RBP5.29□□□□□ -1.56
CHD7-205ENST00000527825 GPKOWQ92917 476 aaPredicted RBP eCLIP5.29□□□□□ -1.56
CHD7-205ENST00000527825 GUCD1Q96NT3 240 aa5.29□□□□□ -1.56
CHD7-205ENST00000527825 POLR3GLQ9BT43 218 aa5.29□□□□□ -1.56
CHD7-205ENST00000527825 TRIM34Q9BYJ4 488 aa5.29□□□□□ -1.56
CHD7-205ENST00000527825 KCNQ5Q9NR82 932 aa5.29□□□□□ -1.56
CHD7-205ENST00000527825 NXF1Q9UBU9 619 aaKnown RBP5.29□□□□□ -1.56
CHD7-205ENST00000527825 RTL9Q8NET4 1388 aa5.29□□□□□ -1.56
CHD7-205ENST00000527825 DDX60LQ5H9U9 1706 aaKnown RBP5.28□□□□□ -1.56
CHD7-205ENST00000527825 BRCA2P51587 3418 aa5.28□□□□□ -1.56
CHD7-205ENST00000527825 NTSR2O95665 410 aa5.28□□□□□ -1.56
CHD7-205ENST00000527825 NR3C2P08235 984 aa5.28□□□□□ -1.56
CHD7-205ENST00000527825 SYN1P17600 705 aa5.28□□□□□ -1.56
CHD7-205ENST00000527825 CAPN2P17655 700 aa5.28□□□□□ -1.56
CHD7-205ENST00000527825 MAGEA10P43363 369 aaPredicted RBP5.28□□□□□ -1.56
CHD7-205ENST00000527825 PARP10Q53GL7 1025 aa5.28□□□□□ -1.56
CHD7-205ENST00000527825 LDLRAD1Q5T700 205 aa5.28□□□□□ -1.56
CHD7-205ENST00000527825 FAM109BQ6ICB4 259 aaPredicted RBP5.28□□□□□ -1.56
CHD7-205ENST00000527825 PDXDC2PQ6P474 469 aa5.28□□□□□ -1.56
CHD7-205ENST00000527825 NECAB2Q7Z6G3 386 aa5.28□□□□□ -1.56
CHD7-205ENST00000527825 SH3RF1Q7Z6J0 888 aa5.28□□□□□ -1.56
CHD7-205ENST00000527825 UBE2Q1Q7Z7E8 422 aa5.28□□□□□ -1.56
CHD7-205ENST00000527825 MORC1Q86VD1 984 aa5.28□□□□□ -1.56
CHD7-205ENST00000527825 PNMA1Q8ND90 353 aa5.28□□□□□ -1.56
CHD7-205ENST00000527825 GAS2L2Q8NHY3 880 aa5.28□□□□□ -1.56
CHD7-205ENST00000527825 U2AF1L4Q8WU68 220 aaKnown RBP5.28□□□□□ -1.56
CHD7-205ENST00000527825 PURBQ96QR8 312 aaKnown RBP5.28□□□□□ -1.56
CHD7-205ENST00000527825 UTP14AQ9BVJ6 771 aaKnown RBP5.28□□□□□ -1.56
CHD7-205ENST00000527825 ZFAND3Q9H8U3 227 aa5.28□□□□□ -1.56
CHD7-205ENST00000527825 SNRKQ9NRH2 765 aa5.28□□□□□ -1.56
CHD7-205ENST00000527825 SPEF2Q9C093 1822 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 UBN2Q6ZU65 1347 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 SYNGAP1Q96PV0 1343 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 COL1A1P02452 1464 aaPredicted RBP5.27□□□□□ -1.57
CHD7-205ENST00000527825 MAGEB6P1A0A0J9YX57 407 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 UNCXA6NJT0 531 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 KCNQ3O43525 872 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 ZIC2O95409 532 aaPredicted RBP5.27□□□□□ -1.57
CHD7-205ENST00000527825 SGPL1O95470 568 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 FOSL2P15408 326 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 IL13P35225 146 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 GRM5P41594 1212 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 IREB2P48200 963 aaKnown RBP5.27□□□□□ -1.57
CHD7-205ENST00000527825 LACTBP83111 547 aaPredicted RBP5.27□□□□□ -1.57
CHD7-205ENST00000527825 INSM1Q01101 510 aaPredicted RBP5.27□□□□□ -1.57
CHD7-205ENST00000527825 CAP1Q01518 475 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 NR5A1Q13285 461 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 NBPF9Q3BBW0 867 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 NBPF10Q6P3W6 841 aaKnown RBP5.27□□□□□ -1.57
CHD7-205ENST00000527825 SH3BP5LQ7L8J4 393 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 MTMR14Q8NCE2 650 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 ITPKCQ96DU7 683 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 CLMNQ96JQ2 1002 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 CDX2Q99626 313 aaPredicted RBP5.27□□□□□ -1.57
CHD7-205ENST00000527825 C1QTNF1Q9BXJ1 281 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 C1QTNF2Q9BXJ5 285 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 ARHGAP39Q9C0H5 1083 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 FZD1Q9UP38 647 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 RIPOR2Q9Y4F9 1068 aa5.27□□□□□ -1.57
CHD7-205ENST00000527825 FAM205AQ6ZU69 1335 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 MYPNQ86TC9 1320 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 TCF20Q9UGU0 1960 aaKnown RBP5.26□□□□□ -1.57
CHD7-205ENST00000527825 CCL15-CCL14A0A0B4J2E2 113 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 USP17L3A6NCW0 530 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 USP17L4A6NCW7 530 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 SOBPA7XYQ1 873 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 SASH1O94885 1247 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 MYL6BP14649 208 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 GPSM2P81274 684 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 CCL15Q16663 113 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 SUPT20HL1Q3ZLR7 823 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 USP17L1Q7RTZ2 530 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 ALYREFQ86V81 257 aaKnown RBP5.26□□□□□ -1.57
CHD7-205ENST00000527825 ANKRD13AQ8IZ07 590 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 IL17REQ8NFR9 667 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 UBE2Q2Q8WVN8 375 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 MYLIPQ8WY64 445 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 PAWRQ96IZ0 340 aaKnown RBP5.26□□□□□ -1.57
CHD7-205ENST00000527825 PPP4R2Q9NY27 417 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 ANKIB1Q9P2G1 1089 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 STK17AQ9UEE5 414 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 POLLQ9UGP5 575 aa5.26□□□□□ -1.57
CHD7-205ENST00000527825 NOP58Q9Y2X3 529 aaKnown RBP5.26□□□□□ -1.57
CHD7-205ENST00000527825 RRP7AQ9Y3A4 280 aaKnown RBP5.26□□□□□ -1.57
CHD7-205ENST00000527825 H3BM21 787 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 APBB1O00213 710 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 WNT10BO00744 389 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 ANP32CO43423 234 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 TLR2O60603 784 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 UFL1O94874 794 aa5.25□□□□□ -1.57
CHD7-205ENST00000527825 HCLS1P14317 486 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms