RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 IGF2BP3O00425 579 aaKnown RBP eCLIP13.55□□□□□ -0.24
CTSB-214ENST00000527243 CTNND1O60716 968 aaKnown RBP13.55□□□□□ -0.24
CTSB-214ENST00000527243 PPATQ06203 517 aa13.55□□□□□ -0.24
CTSB-214ENST00000527243 COL13A1Q5TAT6 717 aaPredicted RBP13.55□□□□□ -0.24
CTSB-214ENST00000527243 ZSCAN25Q6NSZ9 544 aa13.55□□□□□ -0.24
CTSB-214ENST00000527243 CHD1LQ86WJ1 897 aa13.55□□□□□ -0.24
CTSB-214ENST00000527243 SCYL3Q8IZE3 742 aa13.55□□□□□ -0.24
CTSB-214ENST00000527243 BRI3BPQ8WY22 251 aa13.55□□□□□ -0.24
CTSB-214ENST00000527243 OTUD5Q96G74 571 aa13.55□□□□□ -0.24
CTSB-214ENST00000527243 LNPKQ9C0E8 428 aa13.55□□□□□ -0.24
CTSB-214ENST00000527243 PUS7LQ9H0K6 701 aaKnown RBP13.55□□□□□ -0.24
CTSB-214ENST00000527243 HERC5Q9UII4 1024 aaKnown RBP13.55□□□□□ -0.24
CTSB-214ENST00000527243 TSKSQ9UJT2 592 aa13.55□□□□□ -0.24
CTSB-214ENST00000527243 KCNH4Q9UQ05 1017 aa13.55□□□□□ -0.24
CTSB-214ENST00000527243 DDX60LQ5H9U9 1706 aaKnown RBP13.54□□□□□ -0.24
CTSB-214ENST00000527243 IRF6O14896 467 aa13.54□□□□□ -0.24
CTSB-214ENST00000527243 TRPA1O75762 1119 aa13.54□□□□□ -0.24
CTSB-214ENST00000527243 MBD4O95243 580 aa13.54□□□□□ -0.24
CTSB-214ENST00000527243 IFNL1Q8IU54 200 aa13.54□□□□□ -0.24
CTSB-214ENST00000527243 FOXP4Q8IVH2 680 aaPredicted RBP13.54□□□□□ -0.24
CTSB-214ENST00000527243 OSBP2Q969R2 916 aa13.54□□□□□ -0.24
CTSB-214ENST00000527243 CRNKL1Q9BZJ0 848 aaKnown RBP13.54□□□□□ -0.24
CTSB-214ENST00000527243 EHD4Q9H223 541 aa13.54□□□□□ -0.24
CTSB-214ENST00000527243 OSBPL3Q9H4L5 887 aa13.54□□□□□ -0.24
CTSB-214ENST00000527243 ARMT1Q9H993 441 aa13.54□□□□□ -0.24
CTSB-214ENST00000527243 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.54□□□□□ -0.243e-7■□□□□ 9.8
CTSB-214ENST00000527243 SAP30BPQ9UHR5 308 aaKnown RBP13.54□□□□□ -0.24
CTSB-214ENST00000527243 RNF113AO15541 343 aaKnown RBP13.53□□□□□ -0.24
CTSB-214ENST00000527243 PRKAB2O43741 272 aa13.53□□□□□ -0.24
CTSB-214ENST00000527243 ZFYP08048 801 aaPredicted RBP13.53□□□□□ -0.24
CTSB-214ENST00000527243 PTPRAP18433 802 aa13.53□□□□□ -0.24
CTSB-214ENST00000527243 CAP2P40123 477 aa13.53□□□□□ -0.24
CTSB-214ENST00000527243 USP5P45974 858 aa13.53□□□□□ -0.24
CTSB-214ENST00000527243 GTF2A2P52657 109 aa13.53□□□□□ -0.24
CTSB-214ENST00000527243 GABPAQ06546 454 aa13.53□□□□□ -0.24
CTSB-214ENST00000527243 MOGSQ13724 837 aa13.53□□□□□ -0.24
CTSB-214ENST00000527243 NOM1Q5C9Z4 860 aaKnown RBP13.53□□□□□ -0.24
CTSB-214ENST00000527243 B4GALNT3Q6L9W6 998 aa13.53□□□□□ -0.24
CTSB-214ENST00000527243 PLEKHM2Q8IWE5 1019 aa13.53□□□□□ -0.24
CTSB-214ENST00000527243 APPBP2Q92624 585 aa13.53□□□□□ -0.24
CTSB-214ENST00000527243 DCP1AQ9NPI6 582 aaPredicted RBP13.53□□□□□ -0.24
CTSB-214ENST00000527243 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.53□□□□□ -0.24
CTSB-214ENST00000527243 AK9Q5TCS8 1911 aa13.52□□□□□ -0.24
CTSB-214ENST00000527243 JAG1P78504 1218 aa13.52□□□□□ -0.25
CTSB-214ENST00000527243 EVX2Q03828 476 aa13.52□□□□□ -0.25
CTSB-214ENST00000527243 SDR42E1Q8WUS8 393 aa13.52□□□□□ -0.25
CTSB-214ENST00000527243 CCDC136Q96JN2 1154 aa13.52□□□□□ -0.25
CTSB-214ENST00000527243 STRBPQ96SI9 672 aaKnown RBP13.52□□□□□ -0.25
CTSB-214ENST00000527243 R3HDMLQ9H3Y0 253 aa13.52□□□□□ -0.25
CTSB-214ENST00000527243 ATP8A2Q9NTI2 1148 aa13.52□□□□□ -0.25
CTSB-214ENST00000527243 ZBTB47Q9UFB7 747 aaPredicted RBP13.52□□□□□ -0.25
CTSB-214ENST00000527243 CCL15-CCL14A0A0B4J2E2 113 aa13.51□□□□□ -0.25
CTSB-214ENST00000527243 CXCL11O14625 94 aa13.51□□□□□ -0.25
CTSB-214ENST00000527243 ALDH1A1P00352 501 aa13.51□□□□□ -0.25
CTSB-214ENST00000527243 HLA-DOAP06340 250 aa13.51□□□□□ -0.25
CTSB-214ENST00000527243 PLCD1P51178 756 aa13.51□□□□□ -0.25
CTSB-214ENST00000527243 SNAPC2Q13487 334 aa13.51□□□□□ -0.25
CTSB-214ENST00000527243 CCL15Q16663 113 aa13.51□□□□□ -0.25
CTSB-214ENST00000527243 ZMYM1Q5SVZ6 1142 aa13.51□□□□□ -0.25
CTSB-214ENST00000527243 TATDN1Q6P1N9 297 aa13.51□□□□□ -0.25
CTSB-214ENST00000527243 TTC6Q86TZ1 520 aa13.51□□□□□ -0.25
CTSB-214ENST00000527243 TSHZ2Q9NRE2 1034 aa13.51□□□□□ -0.25
CTSB-214ENST00000527243 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.51□□□□□ -0.25
CTSB-214ENST00000527243 AFG3L2Q9Y4W6 797 aa13.51□□□□□ -0.25
CTSB-214ENST00000527243 MYH7P12883 1935 aa13.51□□□□□ -0.25
CTSB-214ENST00000527243 CETPP11597 493 aa13.5□□□□□ -0.25
CTSB-214ENST00000527243 PDE4AP27815 886 aa13.5□□□□□ -0.25
CTSB-214ENST00000527243 SHROOM1Q2M3G4 852 aaPredicted RBP13.5□□□□□ -0.25
CTSB-214ENST00000527243 CCDC84Q86UT8 332 aaPredicted RBP13.5□□□□□ -0.25
CTSB-214ENST00000527243 TICAM2Q86XR7 235 aa13.5□□□□□ -0.25
CTSB-214ENST00000527243 FAM43AQ8N2R8 423 aa13.5□□□□□ -0.25
CTSB-214ENST00000527243 EVI5LQ96CN4 794 aa13.5□□□□□ -0.25
CTSB-214ENST00000527243 ZCCHC17Q9NP64 241 aaKnown RBP13.5□□□□□ -0.25
CTSB-214ENST00000527243 PICK1Q9NRD5 415 aa13.5□□□□□ -0.25
CTSB-214ENST00000527243 MCM9Q9NXL9 1143 aa13.5□□□□□ -0.25
CTSB-214ENST00000527243 SERPINB13Q9UIV8 391 aa13.5□□□□□ -0.25
CTSB-214ENST00000527243 TAOK2Q9UL54 1235 aa13.5□□□□□ -0.25
CTSB-214ENST00000527243 ZHX2Q9Y6X8 837 aa13.5□□□□□ -0.25
CTSB-214ENST00000527243 DOCK1Q14185 1865 aa13.49□□□□□ -0.25
CTSB-214ENST00000527243 A0A0G2JLL6 359 aaPredicted RBP13.49□□□□□ -0.25
CTSB-214ENST00000527243 GSG1L2A8MUP6 293 aa13.49□□□□□ -0.25
CTSB-214ENST00000527243 BTBD19C9JJ37 291 aa13.49□□□□□ -0.25
CTSB-214ENST00000527243 M0R2C6 588 aa13.49□□□□□ -0.25
CTSB-214ENST00000527243 TBC1D8O95759 1140 aa13.49□□□□□ -0.25
CTSB-214ENST00000527243 CYP2D6P10635 497 aa13.49□□□□□ -0.25
CTSB-214ENST00000527243 SHMT1P34896 483 aa13.49□□□□□ -0.25
CTSB-214ENST00000527243 SLC4A8Q2Y0W8 1093 aa13.49□□□□□ -0.25
CTSB-214ENST00000527243 LRRFIP1Q32MZ4 808 aaKnown RBP13.49□□□□□ -0.25
CTSB-214ENST00000527243 PRRT2Q7Z6L0 340 aaPredicted RBP13.49□□□□□ -0.25
CTSB-214ENST00000527243 FSD1Q9BTV5 496 aa13.49□□□□□ -0.25
CTSB-214ENST00000527243 GINM1Q9NU53 330 aa13.49□□□□□ -0.25
CTSB-214ENST00000527243 MYH1P12882 1939 aa13.49□□□□□ -0.25
CTSB-214ENST00000527243 SMIM22K7EJ46 135 aa13.48□□□□□ -0.25
CTSB-214ENST00000527243 GPR25O00155 361 aa13.48□□□□□ -0.25
CTSB-214ENST00000527243 GPAA1O43292 621 aa13.48□□□□□ -0.25
CTSB-214ENST00000527243 CRHR2Q13324 411 aa13.48□□□□□ -0.25
CTSB-214ENST00000527243 C12orf60Q5U649 245 aa13.48□□□□□ -0.25
CTSB-214ENST00000527243 GPAT2Q6NUI2 795 aa13.48□□□□□ -0.25
CTSB-214ENST00000527243 GIMAP6Q6P9H5 292 aa13.48□□□□□ -0.25
CTSB-214ENST00000527243 ANKRD23Q86SG2 305 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms