RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 CD2APQ9Y5K6 639 aa10.46□□□□□ -0.73
CTNND1-213ENST00000526357 NOP56O00567 594 aaKnown RBP10.46□□□□□ -0.74
CTNND1-213ENST00000526357 VPS37BQ9H9H4 285 aa10.46□□□□□ -0.74
CTNND1-213ENST00000526357 TROQ12816 1431 aaPredicted RBP10.46□□□□□ -0.74
CTNND1-213ENST00000526357 SUPT6HQ7KZ85 1726 aaKnown RBP10.46□□□□□ -0.74
CTNND1-213ENST00000526357 CHMP2AO43633 222 aa10.46□□□□□ -0.74
CTNND1-213ENST00000526357 CCNT1O60563 726 aaKnown RBP10.46□□□□□ -0.74
CTNND1-213ENST00000526357 PRPF6O94906 941 aaKnown RBP10.46□□□□□ -0.74
CTNND1-213ENST00000526357 TBC1D8O95759 1140 aa10.46□□□□□ -0.74
CTNND1-213ENST00000526357 DNM2P50570 870 aa10.46□□□□□ -0.74
CTNND1-213ENST00000526357 DENND2CQ68D51 928 aa10.46□□□□□ -0.74
CTNND1-213ENST00000526357 CCDC105Q8IYK2 499 aa10.46□□□□□ -0.74
CTNND1-213ENST00000526357 VPS16Q9H269 839 aa10.46□□□□□ -0.74
CTNND1-213ENST00000526357 HELLSQ9NRZ9 838 aa10.46□□□□□ -0.74
CTNND1-213ENST00000526357 PFDN6O15212 129 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 CEP104O60308 925 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 PHBP35232 272 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 DBN1Q16643 649 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 PNMA8AQ86V59 439 aaPredicted RBP10.45□□□□□ -0.74
CTNND1-213ENST00000526357 TRIM56Q9BRZ2 755 aaKnown RBP10.45□□□□□ -0.74
CTNND1-213ENST00000526357 SYNRGQ9UMZ2 1314 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 AK2P54819 239 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 RNASE9P60153 205 aaKnown RBP10.45□□□□□ -0.74
CTNND1-213ENST00000526357 MUM1Q2TAK8 710 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 COPS6Q7L5N1 327 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 MIGA1Q8NAN2 632 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 UBE2Q2Q8WVN8 375 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 TRIM31Q9BZY9 425 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 RAB17Q9H0T7 212 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 BAG5Q9UL15 447 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 DENND2AQ9ULE3 1009 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 DEXIO95424 95 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 PAK1Q13153 545 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 CFAP221Q4G0U5 840 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 FCHSD1Q86WN1 690 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 CSGALNACT2Q8N6G5 542 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 ANKRD44Q8N8A2 993 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 DMRT2Q9Y5R5 561 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 XRCC6P12956 609 aaKnown RBP eCLIP10.45□□□□□ -0.742e-8■□□□□ 8.5
CTNND1-213ENST00000526357 COG7P83436 770 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 CCDC93Q567U6 631 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 HACE1Q8IYU2 909 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 SDCCAG3Q96C92 435 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 IQCDQ96DY2 449 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 KCNG1Q9UIX4 513 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 IGHDP01880 384 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 WHAMMP3Q1A5X7 153 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 INTS4Q96HW7 963 aaKnown RBP10.45□□□□□ -0.74
CTNND1-213ENST00000526357 AZI2Q9H6S1 392 aa10.45□□□□□ -0.74
CTNND1-213ENST00000526357 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.45□□□□□ -0.74
CTNND1-213ENST00000526357 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.45□□□□□ -0.74
CTNND1-213ENST00000526357 ANKRD36BQ8N2N9 1353 aa10.44□□□□□ -0.74
CTNND1-213ENST00000526357 GOLGA8CPA6NN73 597 aa10.44□□□□□ -0.74
CTNND1-213ENST00000526357 FLOT1O75955 427 aa10.44□□□□□ -0.74
CTNND1-213ENST00000526357 RAPGEF3O95398 923 aa10.44□□□□□ -0.74
CTNND1-213ENST00000526357 TMTC1Q8IUR5 882 aa10.44□□□□□ -0.74
CTNND1-213ENST00000526357 PALM2Q8IXS6 379 aa10.44□□□□□ -0.74
CTNND1-213ENST00000526357 SMAP1Q8IYB5 467 aaPredicted RBP10.44□□□□□ -0.74
CTNND1-213ENST00000526357 NUCKS1Q9H1E3 243 aaKnown RBP10.44□□□□□ -0.74
CTNND1-213ENST00000526357 U2AF2P26368 475 aaKnown RBP eCLIP10.44□□□□□ -0.741e-10■■□□□ 14
CTNND1-213ENST00000526357 SKAP1Q86WV1 359 aa10.44□□□□□ -0.74
CTNND1-213ENST00000526357 ZBTB9Q96C00 473 aa10.44□□□□□ -0.74
CTNND1-213ENST00000526357 DNAJC8O75937 253 aaPredicted RBP10.44□□□□□ -0.74
CTNND1-213ENST00000526357 CDR2Q01850 454 aa10.44□□□□□ -0.74
CTNND1-213ENST00000526357 RPS6KA1Q15418 735 aa10.44□□□□□ -0.74
CTNND1-213ENST00000526357 KLHL7Q8IXQ5 586 aa10.44□□□□□ -0.74
CTNND1-213ENST00000526357 GRK7Q8WTQ7 553 aa10.44□□□□□ -0.74
CTNND1-213ENST00000526357 RSAD2Q8WXG1 361 aa10.44□□□□□ -0.74
CTNND1-213ENST00000526357 GPCPD1Q9NPB8 672 aa10.44□□□□□ -0.74
CTNND1-213ENST00000526357 DZIP3Q86Y13 1208 aaKnown RBP10.44□□□□□ -0.74
CTNND1-213ENST00000526357 IMPACTQ9P2X3 320 aa10.44□□□□□ -0.74
CTNND1-213ENST00000526357 IFT140Q96RY7 1462 aa10.44□□□□□ -0.74
CTNND1-213ENST00000526357 ARHGAP42A6NI28 874 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 RIMBP2O15034 1052 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 OATP04181 439 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 STX2P32856 288 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 RAB3GAP1Q15042 981 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 CHST3Q7LGC8 479 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 HOOK2Q96ED9 719 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 SFMBT2Q5VUG0 894 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 NCAPH2Q6IBW4 605 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 KRT12Q99456 494 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 NXNQ6DKJ4 435 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 FAM71BQ8TC56 605 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 PPME1Q9Y570 386 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 IVNS1ABPQ9Y6Y0 642 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 AKAP4Q5JQC9 854 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 TMEM87BQ96K49 555 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 MEIS3Q99687 375 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 SUDS3Q9H7L9 328 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-213ENST00000526357 HGSO14964 777 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-213ENST00000526357 KRT19P08727 400 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 PEX26Q7Z412 305 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 TEKT1Q969V4 418 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 DNM3Q9UQ16 869 aa10.43□□□□□ -0.74
CTNND1-213ENST00000526357 A0A1B0GVL5 298 aa10.42□□□□□ -0.74
CTNND1-213ENST00000526357 OPHN1O60890 802 aa10.42□□□□□ -0.74
CTNND1-213ENST00000526357 ZBED4O75132 1171 aa10.42□□□□□ -0.74
CTNND1-213ENST00000526357 ECM2O94769 699 aaPredicted RBP10.42□□□□□ -0.74
CTNND1-213ENST00000526357 JADE1Q6IE81 842 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms